RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 KDM6AO15550 1401 aaPredicted RBP16.51■□□□□ 0.23
USP38-202ENST00000510377 ABL1P00519 1130 aa16.51■□□□□ 0.23
USP38-202ENST00000510377 USP17L8P0C7I0 530 aa16.51■□□□□ 0.23
USP38-202ENST00000510377 RBM5P52756 815 aaKnown RBP eCLIP16.51■□□□□ 0.23
USP38-202ENST00000510377 KLHL30Q0D2K2 578 aa16.51■□□□□ 0.23
USP38-202ENST00000510377 KRT12Q99456 494 aa16.51■□□□□ 0.23
USP38-202ENST00000510377 EPB41L5Q9HCM4 733 aa16.51■□□□□ 0.23
USP38-202ENST00000510377 LRRIQ3A6PVS8 624 aaPredicted RBP16.51■□□□□ 0.23
USP38-202ENST00000510377 PPP1R3GB7ZBB8 358 aa16.51■□□□□ 0.23
USP38-202ENST00000510377 C6orf229H3BNL8 230 aa16.51■□□□□ 0.23
USP38-202ENST00000510377 OR52Z1P0C646 297 aa16.51■□□□□ 0.23
USP38-202ENST00000510377 PAK2Q13177 524 aa16.51■□□□□ 0.23
USP38-202ENST00000510377 TCEAL9Q9UHQ7 104 aa16.51■□□□□ 0.23
USP38-202ENST00000510377 AGLP35573 1532 aa16.51■□□□□ 0.23
USP38-202ENST00000510377 SEMA3EO15041 775 aa16.51■□□□□ 0.23
USP38-202ENST00000510377 DDAH1O94760 285 aa16.51■□□□□ 0.23
USP38-202ENST00000510377 KLK7P49862 253 aa16.51■□□□□ 0.23
USP38-202ENST00000510377 POLR2FP61218 127 aaKnown RBP16.51■□□□□ 0.23
USP38-202ENST00000510377 ZBED6P86452 979 aa16.51■□□□□ 0.23
USP38-202ENST00000510377 ALX1Q15699 326 aa16.51■□□□□ 0.23
USP38-202ENST00000510377 HERC4Q5GLZ8 1057 aaPredicted RBP16.51■□□□□ 0.23
USP38-202ENST00000510377 NFRKBQ6P4R8 1299 aa16.51■□□□□ 0.23
USP38-202ENST00000510377 TICAM2Q86XR7 235 aa16.51■□□□□ 0.23
USP38-202ENST00000510377 CCDC87Q9NVE4 849 aa16.51■□□□□ 0.23
USP38-202ENST00000510377 L1RE1Q9UN81 338 aa16.51■□□□□ 0.23
USP38-202ENST00000510377 A0A087X0B3 334 aa16.5■□□□□ 0.23
USP38-202ENST00000510377 KLRF2D3W0D1 207 aa16.5■□□□□ 0.23
USP38-202ENST00000510377 SMIM22K7EJ46 135 aa16.5■□□□□ 0.23
USP38-202ENST00000510377 B4GALNT4Q76KP1 1039 aa16.5■□□□□ 0.23
USP38-202ENST00000510377 CCDC84Q86UT8 332 aaPredicted RBP16.5■□□□□ 0.23
USP38-202ENST00000510377 LSM14BQ9BX40 385 aaKnown RBP16.5■□□□□ 0.23
USP38-202ENST00000510377 USP17L3A6NCW0 530 aa16.5■□□□□ 0.23
USP38-202ENST00000510377 USP17L4A6NCW7 530 aa16.5■□□□□ 0.23
USP38-202ENST00000510377 LDHCP07864 332 aa16.5■□□□□ 0.23
USP38-202ENST00000510377 TCP1P17987 556 aaKnown RBP16.5■□□□□ 0.23
USP38-202ENST00000510377 MAGEA9P43362 315 aa16.5■□□□□ 0.23
USP38-202ENST00000510377 CALCRLQ16602 461 aa16.5■□□□□ 0.23
USP38-202ENST00000510377 USP17L1Q7RTZ2 530 aa16.5■□□□□ 0.23
USP38-202ENST00000510377 MON2Q7Z3U7 1717 aa16.5■□□□□ 0.23
USP38-202ENST00000510377 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.5■□□□□ 0.23
USP38-202ENST00000510377 TMEM110-MUSTN1A8MSY1 372 aa16.5■□□□□ 0.23
USP38-202ENST00000510377 KCNK3O14649 394 aa16.5■□□□□ 0.23
USP38-202ENST00000510377 CACNB1Q02641 598 aaPredicted RBP16.5■□□□□ 0.23
USP38-202ENST00000510377 TBX2Q13207 712 aaPredicted RBP16.5■□□□□ 0.23
USP38-202ENST00000510377 PLCD4Q9BRC7 762 aa16.5■□□□□ 0.23
USP38-202ENST00000510377 NBPF3Q9H094 633 aa16.5■□□□□ 0.23
USP38-202ENST00000510377 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.5■□□□□ 0.237e-6■■■■■ 33.3
USP38-202ENST00000510377 DUSP10Q9Y6W6 482 aa16.5■□□□□ 0.23
USP38-202ENST00000510377 HGSO14964 777 aaPredicted RBP16.49■□□□□ 0.23
USP38-202ENST00000510377 HEXIM1O94992 359 aaKnown RBP16.49■□□□□ 0.23
USP38-202ENST00000510377 KRT13P13646 458 aa16.49■□□□□ 0.23
USP38-202ENST00000510377 PARP10Q53GL7 1025 aa16.49■□□□□ 0.23
USP38-202ENST00000510377 SFMBT2Q5VUG0 894 aa16.49■□□□□ 0.23
USP38-202ENST00000510377 SRBD1Q8N5C6 995 aaKnown RBP16.49■□□□□ 0.23
USP38-202ENST00000510377 ADAT2Q7Z6V5 191 aaKnown RBP16.49■□□□□ 0.23
USP38-202ENST00000510377 SETDB2Q96T68 719 aa16.49■□□□□ 0.23
USP38-202ENST00000510377 SPATA31A3Q5VYP0 1347 aa16.49■□□□□ 0.23
USP38-202ENST00000510377 GNPATO15228 680 aa16.49■□□□□ 0.23
USP38-202ENST00000510377 KIF11P52732 1056 aa16.49■□□□□ 0.23
USP38-202ENST00000510377 KIAA0753Q2KHM9 967 aa16.49■□□□□ 0.23
USP38-202ENST00000510377 CERKQ8TCT0 537 aa16.49■□□□□ 0.23
USP38-202ENST00000510377 COG1Q8WTW3 980 aa16.49■□□□□ 0.23
USP38-202ENST00000510377 KCND1Q9NSA2 647 aa16.49■□□□□ 0.23
USP38-202ENST00000510377 REXO1Q8N1G1 1221 aaKnown RBP16.48■□□□□ 0.23
USP38-202ENST00000510377 HSD3B7Q9H2F3 369 aa16.48■□□□□ 0.23
USP38-202ENST00000510377 CCNL1Q9UK58 526 aaPredicted RBP16.48■□□□□ 0.23
USP38-202ENST00000510377 NFU1Q9UMS0 254 aa16.48■□□□□ 0.23
USP38-202ENST00000510377 PCDHA4Q9UN74 947 aa16.48■□□□□ 0.23
USP38-202ENST00000510377 FRMPD2Q68DX3 1309 aaPredicted RBP16.48■□□□□ 0.23
USP38-202ENST00000510377 ABCC12Q96J65 1359 aa16.48■□□□□ 0.23
USP38-202ENST00000510377 SLIT1O75093 1534 aa16.48■□□□□ 0.23
USP38-202ENST00000510377 CSF1RP07333 972 aa16.48■□□□□ 0.23
USP38-202ENST00000510377 KRT25Q7Z3Z0 450 aa16.48■□□□□ 0.23
USP38-202ENST00000510377 NKX2-3Q8TAU0 364 aa16.48■□□□□ 0.23
USP38-202ENST00000510377 FAM184BQ9ULE4 1060 aa16.48■□□□□ 0.23
USP38-202ENST00000510377 PCDHA13Q9Y5I0 950 aa16.48■□□□□ 0.23
USP38-202ENST00000510377 CCNE1P24864 410 aa16.48■□□□□ 0.23
USP38-202ENST00000510377 TRAPPC10P48553 1259 aa16.48■□□□□ 0.23
USP38-202ENST00000510377 ATP2C1P98194 919 aaPredicted RBP16.48■□□□□ 0.23
USP38-202ENST00000510377 GBP6Q6ZN66 633 aa16.48■□□□□ 0.23
USP38-202ENST00000510377 LIMA1Q9UHB6 759 aaKnown RBP16.48■□□□□ 0.23
USP38-202ENST00000510377 FCER1AP12319 257 aa16.47■□□□□ 0.23
USP38-202ENST00000510377 MAP2K1Q02750 393 aaPredicted RBP16.47■□□□□ 0.23
USP38-202ENST00000510377 ASIC2Q16515 512 aa16.47■□□□□ 0.23
USP38-202ENST00000510377 MUM1L1Q5H9M0 696 aa16.47■□□□□ 0.23
USP38-202ENST00000510377 NAA35Q5VZE5 725 aa16.47■□□□□ 0.23
USP38-202ENST00000510377 TEX11Q8IYF3 940 aa16.47■□□□□ 0.23
USP38-202ENST00000510377 ARFGAP2Q8N6H7 521 aa16.47■□□□□ 0.23
USP38-202ENST00000510377 LRRC1Q9BTT6 524 aa16.47■□□□□ 0.23
USP38-202ENST00000510377 KANSL2Q9H9L4 492 aa16.47■□□□□ 0.23
USP38-202ENST00000510377 EHD2Q9NZN4 543 aa16.47■□□□□ 0.23
USP38-202ENST00000510377 GOLGA8KD6RF30 607 aa16.47■□□□□ 0.23
USP38-202ENST00000510377 PPP1R12BO60237 982 aaPredicted RBP16.47■□□□□ 0.23
USP38-202ENST00000510377 RPS6KA1Q15418 735 aa16.47■□□□□ 0.23
USP38-202ENST00000510377 POTEDQ86YR6 584 aa16.47■□□□□ 0.23
USP38-202ENST00000510377 TMEM139Q8IV31 216 aa16.47■□□□□ 0.23
USP38-202ENST00000510377 SH2D3CQ8N5H7 860 aa16.47■□□□□ 0.23
USP38-202ENST00000510377 FAM169AQ9Y6X4 670 aa16.47■□□□□ 0.23
USP38-202ENST00000510377 XDHP47989 1333 aa16.47■□□□□ 0.23
USP38-202ENST00000510377 CCDC25Q86WR0 208 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms