RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 KRTAP15-1Q3LI76 137 aa5.76□□□□□ -1.49
NIPBL-206ENST00000509429 ZNF830Q96NB3 372 aaPredicted RBP5.76□□□□□ -1.49
NIPBL-206ENST00000509429 DEF6Q9H4E7 631 aa5.76□□□□□ -1.49
NIPBL-206ENST00000509429 NOP58Q9Y2X3 529 aaKnown RBP5.76□□□□□ -1.49
NIPBL-206ENST00000509429 NUB1Q9Y5A7 615 aa5.76□□□□□ -1.49
NIPBL-206ENST00000509429 CREB3O43889 395 aa5.75□□□□□ -1.49
NIPBL-206ENST00000509429 TCF3P15923 654 aa5.75□□□□□ -1.49
NIPBL-206ENST00000509429 SSFA2P28290 1259 aa5.75□□□□□ -1.49
NIPBL-206ENST00000509429 CDK8P49336 464 aa5.75□□□□□ -1.49
NIPBL-206ENST00000509429 IRX3P78415 501 aaPredicted RBP5.75□□□□□ -1.49
NIPBL-206ENST00000509429 PDE3BQ13370 1112 aa5.75□□□□□ -1.49
NIPBL-206ENST00000509429 R3HDM1Q15032 1099 aaKnown RBP5.75□□□□□ -1.49
NIPBL-206ENST00000509429 SPDYAQ5MJ70 313 aa5.75□□□□□ -1.49
NIPBL-206ENST00000509429 CCDC181Q5TID7 509 aa5.75□□□□□ -1.49
NIPBL-206ENST00000509429 WDR78Q5VTH9 848 aa5.75□□□□□ -1.49
NIPBL-206ENST00000509429 SMC5Q8IY18 1101 aa5.75□□□□□ -1.49
NIPBL-206ENST00000509429 OTUD6BQ8N6M0 293 aa5.75□□□□□ -1.49
NIPBL-206ENST00000509429 ENOX1Q8TC92 643 aaKnown RBP5.75□□□□□ -1.49
NIPBL-206ENST00000509429 ZG16BQ96DA0 208 aa5.75□□□□□ -1.49
NIPBL-206ENST00000509429 EAF1Q96JC9 268 aaPredicted RBP5.75□□□□□ -1.49
NIPBL-206ENST00000509429 C8orf37Q96NL8 207 aa5.75□□□□□ -1.49
NIPBL-206ENST00000509429 FOXP3Q9BZS1 431 aa5.75□□□□□ -1.49
NIPBL-206ENST00000509429 NLRP2Q9NX02 1062 aa5.75□□□□□ -1.49
NIPBL-206ENST00000509429 ACSL6Q9UKU0 697 aa5.75□□□□□ -1.49
NIPBL-206ENST00000509429 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.74□□□□□ -1.49
NIPBL-206ENST00000509429 GOLIM4O00461 696 aa5.74□□□□□ -1.49
NIPBL-206ENST00000509429 PEX14O75381 377 aa5.74□□□□□ -1.49
NIPBL-206ENST00000509429 NBPF9Q3BBW0 867 aa5.74□□□□□ -1.49
NIPBL-206ENST00000509429 BORAQ6PGQ7 559 aa5.74□□□□□ -1.49
NIPBL-206ENST00000509429 CLEC4GQ6UXB4 293 aa5.74□□□□□ -1.49
NIPBL-206ENST00000509429 EGFL6Q8IUX8 553 aa5.74□□□□□ -1.49
NIPBL-206ENST00000509429 MCATQ8IVS2 390 aaKnown RBP5.74□□□□□ -1.49
NIPBL-206ENST00000509429 KIAA1522Q9P206 1035 aaPredicted RBP5.74□□□□□ -1.49
NIPBL-206ENST00000509429 SSU72P8A0A1W2PR75 194 aa5.73□□□□□ -1.49
NIPBL-206ENST00000509429 PGRP06401 933 aa5.73□□□□□ -1.49
NIPBL-206ENST00000509429 ZNF662Q6ZS27 426 aa5.73□□□□□ -1.49
NIPBL-206ENST00000509429 GLCCI1Q86VQ1 547 aa5.73□□□□□ -1.49
NIPBL-206ENST00000509429 UBXN4Q92575 508 aa5.73□□□□□ -1.49
NIPBL-206ENST00000509429 SEMA4AQ9H3S1 761 aa5.73□□□□□ -1.49
NIPBL-206ENST00000509429 JADE2Q9NQC1 790 aa5.73□□□□□ -1.49
NIPBL-206ENST00000509429 SPATA6Q9NWH7 488 aaPredicted RBP5.73□□□□□ -1.49
NIPBL-206ENST00000509429 TCFL5Q9UL49 500 aa5.73□□□□□ -1.49
NIPBL-206ENST00000509429 TESMINQ9Y4I5 508 aa5.73□□□□□ -1.49
NIPBL-206ENST00000509429 A0A087X1B8 175 aa5.72□□□□□ -1.49
NIPBL-206ENST00000509429 TCERG1O14776 1098 aaKnown RBP5.72□□□□□ -1.49
NIPBL-206ENST00000509429 MUSKO15146 869 aa5.72□□□□□ -1.49
NIPBL-206ENST00000509429 SH3BP5O60239 455 aa5.72□□□□□ -1.49
NIPBL-206ENST00000509429 EIF3JO75822 258 aaKnown RBP5.72□□□□□ -1.49
NIPBL-206ENST00000509429 ZRANB2O95218 330 aaKnown RBP eCLIP5.72□□□□□ -1.49
NIPBL-206ENST00000509429 MAP4K4O95819 1239 aaPredicted RBP5.72□□□□□ -1.49
NIPBL-206ENST00000509429 NCAM1P13591 858 aa5.72□□□□□ -1.49
NIPBL-206ENST00000509429 PCBP3P57721 371 aaKnown RBP5.72□□□□□ -1.49
NIPBL-206ENST00000509429 HDAC1Q13547 482 aaPredicted RBP5.72□□□□□ -1.49
NIPBL-206ENST00000509429 RGL3Q3MIN7 710 aa5.72□□□□□ -1.49
NIPBL-206ENST00000509429 ZNF280DQ6N043 979 aa5.72□□□□□ -1.49
NIPBL-206ENST00000509429 TTLL7Q6ZT98 887 aa5.72□□□□□ -1.49
NIPBL-206ENST00000509429 SND1Q7KZF4 910 aaKnown RBP eCLIP5.72□□□□□ -1.49
NIPBL-206ENST00000509429 C3orf58Q8NDZ4 430 aa5.72□□□□□ -1.49
NIPBL-206ENST00000509429 NUP43Q8NFH3 380 aa5.72□□□□□ -1.49
NIPBL-206ENST00000509429 DNERQ8NFT8 737 aa5.72□□□□□ -1.49
NIPBL-206ENST00000509429 SYTL5Q8TDW5 730 aaPredicted RBP5.72□□□□□ -1.49
NIPBL-206ENST00000509429 FAM129BQ96TA1 746 aa5.72□□□□□ -1.49
NIPBL-206ENST00000509429 TRIM8Q9BZR9 551 aa5.72□□□□□ -1.49
NIPBL-206ENST00000509429 MAF1Q9H063 256 aa5.72□□□□□ -1.49
NIPBL-206ENST00000509429 METTL14Q9HCE5 456 aaKnown RBP5.72□□□□□ -1.49
NIPBL-206ENST00000509429 KLHL42Q9P2K6 505 aa5.72□□□□□ -1.49
NIPBL-206ENST00000509429 FEZ2Q9UHY8 353 aaPredicted RBP5.72□□□□□ -1.49
NIPBL-206ENST00000509429 GFRA2O00451 464 aa5.71□□□□□ -1.5
NIPBL-206ENST00000509429 EPB41L2O43491 1005 aaKnown RBP5.71□□□□□ -1.5
NIPBL-206ENST00000509429 SELENOPP49908 381 aa5.71□□□□□ -1.5
NIPBL-206ENST00000509429 RHBDL3P58872 404 aa5.71□□□□□ -1.5
NIPBL-206ENST00000509429 GIMAP6Q6P9H5 292 aa5.71□□□□□ -1.5
NIPBL-206ENST00000509429 ZPBP2Q6X784 338 aa5.71□□□□□ -1.5
NIPBL-206ENST00000509429 B3GNT8Q7Z7M8 397 aa5.71□□□□□ -1.5
NIPBL-206ENST00000509429 FAM124AQ86V42 546 aa5.71□□□□□ -1.5
NIPBL-206ENST00000509429 CYB5D2Q8WUJ1 264 aa5.71□□□□□ -1.5
NIPBL-206ENST00000509429 GAL3ST3Q96A11 431 aa5.71□□□□□ -1.5
NIPBL-206ENST00000509429 FCRL2Q96LA5 508 aaPredicted RBP5.71□□□□□ -1.5
NIPBL-206ENST00000509429 PPP4R1LQ9P1A2 415 aa5.71□□□□□ -1.5
NIPBL-206ENST00000509429 PLA2G2DQ9UNK4 145 aa5.71□□□□□ -1.5
NIPBL-206ENST00000509429 ZFR2Q9UPR6 939 aaKnown RBP5.71□□□□□ -1.5
NIPBL-206ENST00000509429 GPR55Q9Y2T6 319 aaPredicted RBP5.71□□□□□ -1.5
NIPBL-206ENST00000509429 TCAF1Q9Y4C2 921 aa5.71□□□□□ -1.5
NIPBL-206ENST00000509429 CCDC194A0A1B0GVG4 234 aa5.7□□□□□ -1.5
NIPBL-206ENST00000509429 PAX3P23760 479 aa5.7□□□□□ -1.5
NIPBL-206ENST00000509429 POLD1P28340 1107 aa5.7□□□□□ -1.5
NIPBL-206ENST00000509429 INHBCP55103 352 aa5.7□□□□□ -1.5
NIPBL-206ENST00000509429 FOXE3Q13461 319 aa5.7□□□□□ -1.5
NIPBL-206ENST00000509429 PCNX4Q63HM2 1172 aa5.7□□□□□ -1.5
NIPBL-206ENST00000509429 PI16Q6UXB8 463 aa5.7□□□□□ -1.5
NIPBL-206ENST00000509429 LINC00116Q8NCU8 138 aa5.7□□□□□ -1.5
NIPBL-206ENST00000509429 ASCC2Q9H1I8 757 aaPredicted RBP5.7□□□□□ -1.5
NIPBL-206ENST00000509429 TMEM51Q9NW97 253 aa5.7□□□□□ -1.5
NIPBL-206ENST00000509429 PNMA2Q9UL42 364 aa5.7□□□□□ -1.5
NIPBL-206ENST00000509429 CENPJQ9HC77 1338 aaPredicted RBP5.7□□□□□ -1.5
NIPBL-206ENST00000509429 ABCC9O60706 1549 aa5.69□□□□□ -1.5
NIPBL-206ENST00000509429 A0A1W2PQ45 241 aaPredicted RBP5.69□□□□□ -1.5
NIPBL-206ENST00000509429 A0A1W2PQY0 241 aa5.69□□□□□ -1.5
NIPBL-206ENST00000509429 ITGB6P18564 788 aa5.69□□□□□ -1.5
NIPBL-206ENST00000509429 MC3RP41968 323 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms