RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 SOX10P56693 466 aa9.16□□□□□ -0.94
CCSER1-208ENST00000509109 MTX1Q13505 466 aa9.16□□□□□ -0.94
CCSER1-208ENST00000509109 MVPQ14764 893 aaKnown RBP9.16□□□□□ -0.94
CCSER1-208ENST00000509109 GRIK5Q16478 980 aa9.16□□□□□ -0.94
CCSER1-208ENST00000509109 SPTY2D1Q68D10 685 aaPredicted RBP9.16□□□□□ -0.94
CCSER1-208ENST00000509109 APOBEC3HQ6NTF7 200 aaKnown RBP9.16□□□□□ -0.94
CCSER1-208ENST00000509109 ATF7IPQ6VMQ6 1270 aa9.16□□□□□ -0.94
CCSER1-208ENST00000509109 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.16□□□□□ -0.94
CCSER1-208ENST00000509109 DZIP1Q86YF9 867 aaKnown RBP9.16□□□□□ -0.94
CCSER1-208ENST00000509109 ZNF341Q9BYN7 854 aa9.16□□□□□ -0.94
CCSER1-208ENST00000509109 ZCCHC17Q9NP64 241 aaKnown RBP9.16□□□□□ -0.94
CCSER1-208ENST00000509109 MAST2Q6P0Q8 1798 aa9.16□□□□□ -0.94
CCSER1-208ENST00000509109 RBBP6Q7Z6E9 1792 aaKnown RBP9.16□□□□□ -0.94
CCSER1-208ENST00000509109 MKI67P46013 3256 aaKnown RBP9.16□□□□□ -0.94
CCSER1-208ENST00000509109 CCL15-CCL14A0A0B4J2E2 113 aa9.15□□□□□ -0.94
CCSER1-208ENST00000509109 GNAI2P04899 355 aa9.15□□□□□ -0.94
CCSER1-208ENST00000509109 CETPP11597 493 aa9.15□□□□□ -0.94
CCSER1-208ENST00000509109 TRIM27P14373 513 aa9.15□□□□□ -0.94
CCSER1-208ENST00000509109 PRDX5P30044 214 aa9.15□□□□□ -0.94
CCSER1-208ENST00000509109 CRHR2Q13324 411 aa9.15□□□□□ -0.94
CCSER1-208ENST00000509109 SNAPC2Q13487 334 aa9.15□□□□□ -0.94
CCSER1-208ENST00000509109 CCL15Q16663 113 aa9.15□□□□□ -0.94
CCSER1-208ENST00000509109 ERO1BQ86YB8 467 aa9.15□□□□□ -0.94
CCSER1-208ENST00000509109 FAM151AQ8WW52 585 aa9.15□□□□□ -0.94
CCSER1-208ENST00000509109 FRAT1Q92837 279 aaPredicted RBP9.15□□□□□ -0.94
CCSER1-208ENST00000509109 TNFRSF25Q93038 417 aa9.15□□□□□ -0.94
CCSER1-208ENST00000509109 MDFIQ99750 246 aa9.15□□□□□ -0.94
CCSER1-208ENST00000509109 ZFYVE28Q9HCC9 887 aa9.15□□□□□ -0.94
CCSER1-208ENST00000509109 DMGDHQ9UI17 866 aaKnown RBP9.15□□□□□ -0.94
CCSER1-208ENST00000509109 DAGLAQ9Y4D2 1042 aa9.15□□□□□ -0.94
CCSER1-208ENST00000509109 TRIM17Q9Y577 477 aa9.15□□□□□ -0.94
CCSER1-208ENST00000509109 A0A1B0GUL7 405 aa9.14□□□□□ -0.95
CCSER1-208ENST00000509109 ADARB2-AS1A8MUL3 147 aa9.14□□□□□ -0.95
CCSER1-208ENST00000509109 PIK3R2O00459 728 aa9.14□□□□□ -0.95
CCSER1-208ENST00000509109 MSTNO14793 375 aa9.14□□□□□ -0.95
CCSER1-208ENST00000509109 IGHA1P01876 353 aa9.14□□□□□ -0.95
CCSER1-208ENST00000509109 ADH7P40394 386 aa9.14□□□□□ -0.95
CCSER1-208ENST00000509109 PHKA1P46020 1223 aa9.14□□□□□ -0.95
CCSER1-208ENST00000509109 IDH3AP50213 366 aa9.14□□□□□ -0.95
CCSER1-208ENST00000509109 SP3Q02447 781 aa9.14□□□□□ -0.95
CCSER1-208ENST00000509109 PPIL2Q13356 520 aa9.14□□□□□ -0.95
CCSER1-208ENST00000509109 RASGRF1Q13972 1273 aa9.14□□□□□ -0.95
CCSER1-208ENST00000509109 TAF1CQ15572 869 aaPredicted RBP9.14□□□□□ -0.95
CCSER1-208ENST00000509109 GORABQ5T7V8 394 aa9.14□□□□□ -0.95
CCSER1-208ENST00000509109 IER5Q5VY09 327 aa9.14□□□□□ -0.95
CCSER1-208ENST00000509109 ZKSCAN2Q63HK3 967 aa9.14□□□□□ -0.95
CCSER1-208ENST00000509109 C8orf86Q6ZUL3 223 aa9.14□□□□□ -0.95
CCSER1-208ENST00000509109 FTSJ3Q8IY81 847 aaKnown RBP9.14□□□□□ -0.95
CCSER1-208ENST00000509109 TRIM11Q96F44 468 aa9.14□□□□□ -0.95
CCSER1-208ENST00000509109 CCDC97Q96F63 343 aaPredicted RBP9.14□□□□□ -0.95
CCSER1-208ENST00000509109 SPOCK3Q9BQ16 436 aa9.14□□□□□ -0.95
CCSER1-208ENST00000509109 PA2G4Q9UQ80 394 aaKnown RBP9.14□□□□□ -0.95
CCSER1-208ENST00000509109 SNCAIPQ9Y6H5 919 aa9.14□□□□□ -0.95
CCSER1-208ENST00000509109 DOCK1Q14185 1865 aa9.13□□□□□ -0.95
CCSER1-208ENST00000509109 GAKO14976 1311 aa9.13□□□□□ -0.95
CCSER1-208ENST00000509109 M0R082 166 aa9.13□□□□□ -0.95
CCSER1-208ENST00000509109 ENTPD3O75355 529 aa9.13□□□□□ -0.95
CCSER1-208ENST00000509109 GRNP28799 593 aaKnown RBP9.13□□□□□ -0.95
CCSER1-208ENST00000509109 HNRNPUQ00839 825 aaKnown RBP eCLIP9.13□□□□□ -0.95
CCSER1-208ENST00000509109 PPATQ06203 517 aa9.13□□□□□ -0.95
CCSER1-208ENST00000509109 TCP10Q12799 353 aa9.13□□□□□ -0.95
CCSER1-208ENST00000509109 KIF22Q14807 665 aa9.13□□□□□ -0.95
CCSER1-208ENST00000509109 CDC42EP5Q6NZY7 148 aa9.13□□□□□ -0.95
CCSER1-208ENST00000509109 OTOP1Q7RTM1 612 aa9.13□□□□□ -0.95
CCSER1-208ENST00000509109 ZNF417Q8TAU3 575 aa9.13□□□□□ -0.95
CCSER1-208ENST00000509109 BRI3BPQ8WY22 251 aa9.13□□□□□ -0.95
CCSER1-208ENST00000509109 ZKSCAN4Q969J2 545 aaPredicted RBP9.13□□□□□ -0.95
CCSER1-208ENST00000509109 ZNF587Q96SQ5 575 aaPredicted RBP9.13□□□□□ -0.95
CCSER1-208ENST00000509109 PTPN18Q99952 460 aa9.13□□□□□ -0.95
CCSER1-208ENST00000509109 PLVAPQ9BX97 442 aa9.13□□□□□ -0.95
CCSER1-208ENST00000509109 UBE2OQ9C0C9 1292 aaKnown RBP9.13□□□□□ -0.95
CCSER1-208ENST00000509109 EFCC1Q9HA90 598 aa9.13□□□□□ -0.95
CCSER1-208ENST00000509109 USP40Q9NVE5 1235 aa9.13□□□□□ -0.95
CCSER1-208ENST00000509109 ABCF2Q9UG63 623 aa9.13□□□□□ -0.95
CCSER1-208ENST00000509109 LRFN2Q9ULH4 789 aa9.13□□□□□ -0.95
CCSER1-208ENST00000509109 STARD13Q9Y3M8 1113 aa9.13□□□□□ -0.95
CCSER1-208ENST00000509109 MAP4K4O95819 1239 aaPredicted RBP9.12□□□□□ -0.95
CCSER1-208ENST00000509109 ALBP02768 609 aa9.12□□□□□ -0.95
CCSER1-208ENST00000509109 ADORA1P30542 326 aa9.12□□□□□ -0.95
CCSER1-208ENST00000509109 GSTO1P78417 241 aa9.12□□□□□ -0.95
CCSER1-208ENST00000509109 TFCP2Q12800 502 aa9.12□□□□□ -0.95
CCSER1-208ENST00000509109 G3BP1Q13283 466 aaKnown RBP eCLIP9.12□□□□□ -0.95
CCSER1-208ENST00000509109 ELOAQ14241 798 aaKnown RBP9.12□□□□□ -0.95
CCSER1-208ENST00000509109 C11orf91Q3C1V1 193 aa9.12□□□□□ -0.95
CCSER1-208ENST00000509109 ZSCAN29Q8IWY8 852 aaPredicted RBP9.12□□□□□ -0.95
CCSER1-208ENST00000509109 CD99L2Q8TCZ2 262 aa9.12□□□□□ -0.95
CCSER1-208ENST00000509109 NEUROD6Q96NK8 337 aa9.12□□□□□ -0.95
CCSER1-208ENST00000509109 PNMA5Q96PV4 448 aa9.12□□□□□ -0.95
CCSER1-208ENST00000509109 IDI2Q9BXS1 227 aa9.12□□□□□ -0.95
CCSER1-208ENST00000509109 GSX2Q9BZM3 304 aa9.12□□□□□ -0.95
CCSER1-208ENST00000509109 R3HDMLQ9H3Y0 253 aa9.12□□□□□ -0.95
CCSER1-208ENST00000509109 NOP53Q9NZM5 478 aaKnown RBP9.12□□□□□ -0.95
CCSER1-208ENST00000509109 USP20Q9Y2K6 914 aa9.12□□□□□ -0.95
CCSER1-208ENST00000509109 RFX7Q2KHR2 1363 aa9.12□□□□□ -0.95
CCSER1-208ENST00000509109 MROH7-TTC4A0A0A0MT08 1334 aa9.11□□□□□ -0.95
CCSER1-208ENST00000509109 COL2A1P02458 1487 aaPredicted RBP9.11□□□□□ -0.95
CCSER1-208ENST00000509109 TLR2O60603 784 aa9.11□□□□□ -0.95
CCSER1-208ENST00000509109 BCAR3O75815 825 aa9.11□□□□□ -0.95
CCSER1-208ENST00000509109 LDHCP07864 332 aa9.11□□□□□ -0.95
CCSER1-208ENST00000509109 UQCRFS1P1P0C7P4 283 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms