RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 APPP05067 770 aa19.05■□□□□ 0.64
CXCL1-202ENST00000509101 STAT2P52630 851 aa19.05■□□□□ 0.64
CXCL1-202ENST00000509101 CCL23P55773 120 aa19.05■□□□□ 0.64
CXCL1-202ENST00000509101 IKQ13123 557 aaPredicted RBP19.05■□□□□ 0.64
CXCL1-202ENST00000509101 FSCN1Q16658 493 aaKnown RBP19.05■□□□□ 0.64
CXCL1-202ENST00000509101 TSHZ3Q63HK5 1081 aa19.05■□□□□ 0.64
CXCL1-202ENST00000509101 SLC43A3Q8NBI5 491 aa19.05■□□□□ 0.64
CXCL1-202ENST00000509101 AGBL1Q96MI9 1066 aa19.05■□□□□ 0.64
CXCL1-202ENST00000509101 SLC28A3Q9HAS3 691 aa19.05■□□□□ 0.64
CXCL1-202ENST00000509101 RAPGEFL1Q9UHV5 662 aa19.05■□□□□ 0.64
CXCL1-202ENST00000509101 SYNPO2Q9UMS6 1093 aa19.05■□□□□ 0.64
CXCL1-202ENST00000509101 TRANK1O15050 2925 aa19.04■□□□□ 0.64
CXCL1-202ENST00000509101 CABYRO75952 493 aa19.04■□□□□ 0.64
CXCL1-202ENST00000509101 TSPY3P0CV98 308 aa19.04■□□□□ 0.64
CXCL1-202ENST00000509101 TSPY8P0CW00 308 aa19.04■□□□□ 0.64
CXCL1-202ENST00000509101 MRPS5P82675 430 aaKnown RBP19.04■□□□□ 0.64
CXCL1-202ENST00000509101 ITGA7Q13683 1181 aa19.04■□□□□ 0.64
CXCL1-202ENST00000509101 UHRF1Q96T88 793 aaPredicted RBP19.04■□□□□ 0.64
CXCL1-202ENST00000509101 GNEQ9Y223 722 aaKnown RBP19.04■□□□□ 0.64
CXCL1-202ENST00000509101 ZNF536O15090 1300 aa19.03■□□□□ 0.64
CXCL1-202ENST00000509101 GRIN2DO15399 1336 aa19.03■□□□□ 0.64
CXCL1-202ENST00000509101 TANC1Q9C0D5 1861 aa19.03■□□□□ 0.64
CXCL1-202ENST00000509101 ASB14A6NK59 587 aa19.03■□□□□ 0.64
CXCL1-202ENST00000509101 FDX1P10109 184 aa19.03■□□□□ 0.64
CXCL1-202ENST00000509101 ALAS1P13196 640 aa19.03■□□□□ 0.64
CXCL1-202ENST00000509101 GNAT2P19087 354 aa19.03■□□□□ 0.64
CXCL1-202ENST00000509101 RABGGTBP53611 331 aa19.03■□□□□ 0.64
CXCL1-202ENST00000509101 FBXO16Q8IX29 292 aaPredicted RBP19.03■□□□□ 0.64
CXCL1-202ENST00000509101 IL27Q8NEV9 243 aa19.03■□□□□ 0.64
CXCL1-202ENST00000509101 NOC4LQ9BVI4 516 aaKnown RBP19.03■□□□□ 0.64
CXCL1-202ENST00000509101 AP5M1Q9H0R1 490 aa19.03■□□□□ 0.64
CXCL1-202ENST00000509101 TRPV6Q9H1D0 765 aa19.03■□□□□ 0.64
CXCL1-202ENST00000509101 WNT8AQ9H1J5 351 aa19.03■□□□□ 0.64
CXCL1-202ENST00000509101 CHMP4BQ9H444 224 aaKnown RBP19.03■□□□□ 0.64
CXCL1-202ENST00000509101 XIRP2A4UGR9 3374 aa19.02■□□□□ 0.64
CXCL1-202ENST00000509101 DYNC1LI2O43237 492 aaPredicted RBP19.02■□□□□ 0.64
CXCL1-202ENST00000509101 B4GALT4O60513 344 aa19.02■□□□□ 0.64
CXCL1-202ENST00000509101 SMPD1P17405 629 aa19.02■□□□□ 0.64
CXCL1-202ENST00000509101 PSMC6P62333 389 aa19.02■□□□□ 0.64
CXCL1-202ENST00000509101 EEPD1Q7L9B9 569 aa19.02■□□□□ 0.64
CXCL1-202ENST00000509101 FAM160B2Q86V87 743 aa19.02■□□□□ 0.64
CXCL1-202ENST00000509101 MICALL1Q8N3F8 863 aa19.02■□□□□ 0.64
CXCL1-202ENST00000509101 NEDD1Q8NHV4 660 aa19.02■□□□□ 0.64
CXCL1-202ENST00000509101 TRERF1Q96PN7 1200 aa19.02■□□□□ 0.64
CXCL1-202ENST00000509101 PDGFCQ9NRA1 345 aa19.02■□□□□ 0.64
CXCL1-202ENST00000509101 ZBBXA8MT70 800 aa19.01■□□□□ 0.63
CXCL1-202ENST00000509101 ZEB2O60315 1214 aa19.01■□□□□ 0.63
CXCL1-202ENST00000509101 ZFYP08048 801 aaPredicted RBP19.01■□□□□ 0.63
CXCL1-202ENST00000509101 SLC1A4P43007 532 aa19.01■□□□□ 0.63
CXCL1-202ENST00000509101 SNAP25P60880 206 aa19.01■□□□□ 0.63
CXCL1-202ENST00000509101 TKFCQ3LXA3 575 aa19.01■□□□□ 0.63
CXCL1-202ENST00000509101 TMEM63BQ5T3F8 832 aa19.01■□□□□ 0.63
CXCL1-202ENST00000509101 PPP2R2DQ66LE6 453 aa19.01■□□□□ 0.63
CXCL1-202ENST00000509101 RASGRP2Q7LDG7 609 aa19.01■□□□□ 0.63
CXCL1-202ENST00000509101 IFNL3Q8IZI9 196 aa19.01■□□□□ 0.63
CXCL1-202ENST00000509101 CHURC1Q8WUH1 139 aa19.01■□□□□ 0.63
CXCL1-202ENST00000509101 STAG1Q8WVM7 1258 aa19.01■□□□□ 0.63
CXCL1-202ENST00000509101 SCLYQ96I15 445 aa19.01■□□□□ 0.63
CXCL1-202ENST00000509101 GPATCH3Q96I76 525 aa19.01■□□□□ 0.63
CXCL1-202ENST00000509101 MYOGP15173 224 aa19■□□□□ 0.63
CXCL1-202ENST00000509101 MCCP23508 829 aa19■□□□□ 0.63
CXCL1-202ENST00000509101 TFAP4Q01664 338 aa19■□□□□ 0.63
CXCL1-202ENST00000509101 PDE4BQ07343 736 aa19■□□□□ 0.63
CXCL1-202ENST00000509101 MUM1L1Q5H9M0 696 aa19■□□□□ 0.63
CXCL1-202ENST00000509101 KCTD1Q719H9 257 aa19■□□□□ 0.63
CXCL1-202ENST00000509101 GMCL1Q96IK5 515 aa19■□□□□ 0.63
CXCL1-202ENST00000509101 SLC4A7Q9Y6M7 1214 aa19■□□□□ 0.63
CXCL1-202ENST00000509101 PATL2C9JE40 543 aaKnown RBP18.99■□□□□ 0.63
CXCL1-202ENST00000509101 TAPT1Q6NXT6 567 aa18.99■□□□□ 0.63
CXCL1-202ENST00000509101 SEC62Q99442 399 aaKnown RBP18.99■□□□□ 0.63
CXCL1-202ENST00000509101 NACAP1Q9BZK3 213 aa18.99■□□□□ 0.63
CXCL1-202ENST00000509101 CYP39A1Q9NYL5 469 aa18.99■□□□□ 0.63
CXCL1-202ENST00000509101 PRRC2BQ5JSZ5 2229 aaKnown RBP18.98■□□□□ 0.63
CXCL1-202ENST00000509101 COL4A4P53420 1690 aaPredicted RBP18.98■□□□□ 0.63
CXCL1-202ENST00000509101 SLC3A2P08195 630 aaKnown RBP18.98■□□□□ 0.63
CXCL1-202ENST00000509101 PPARAQ07869 468 aa18.98■□□□□ 0.63
CXCL1-202ENST00000509101 NSMFQ6X4W1 530 aa18.98■□□□□ 0.63
CXCL1-202ENST00000509101 RPUSD2Q8IZ73 545 aaKnown RBP18.98■□□□□ 0.63
CXCL1-202ENST00000509101 MIER1Q8N108 512 aa18.98■□□□□ 0.63
CXCL1-202ENST00000509101 PURBQ96QR8 312 aaKnown RBP18.98■□□□□ 0.63
CXCL1-202ENST00000509101 SEZ6LQ9BYH1 1024 aa18.98■□□□□ 0.63
CXCL1-202ENST00000509101 NAPBQ9H115 298 aa18.98■□□□□ 0.63
CXCL1-202ENST00000509101 ALDH8A1Q9H2A2 487 aaPredicted RBP18.98■□□□□ 0.63
CXCL1-202ENST00000509101 TSPYL2Q9H2G4 693 aaPredicted RBP18.98■□□□□ 0.63
CXCL1-202ENST00000509101 STX8Q9UNK0 236 aa18.98■□□□□ 0.63
CXCL1-202ENST00000509101 MTMR7Q9Y216 660 aa18.98■□□□□ 0.63
CXCL1-202ENST00000509101 PCDHA11Q9Y5I1 949 aa18.98■□□□□ 0.63
CXCL1-202ENST00000509101 SCN10AQ9Y5Y9 1956 aa18.97■□□□□ 0.63
CXCL1-202ENST00000509101 ATP2A2P16615 1042 aaKnown RBP18.97■□□□□ 0.63
CXCL1-202ENST00000509101 C20orf194Q5TEA3 1177 aa18.97■□□□□ 0.63
CXCL1-202ENST00000509101 IQSEC1Q6DN90 963 aa18.97■□□□□ 0.63
CXCL1-202ENST00000509101 KIAA1211Q6ZU35 1233 aa18.97■□□□□ 0.63
CXCL1-202ENST00000509101 VWCEQ96DN2 955 aa18.97■□□□□ 0.63
CXCL1-202ENST00000509101 NECAB3Q96P71 396 aaPredicted RBP18.97■□□□□ 0.63
CXCL1-202ENST00000509101 VTA1Q9NP79 307 aa18.97■□□□□ 0.63
CXCL1-202ENST00000509101 CCPG1Q9ULG6 757 aa18.97■□□□□ 0.63
CXCL1-202ENST00000509101 PRR12Q9ULL5 1215 aa18.97■□□□□ 0.63
CXCL1-202ENST00000509101 Q9Y3F1 56 aa18.97■□□□□ 0.63
CXCL1-202ENST00000509101 PTPRSQ13332 1948 aa18.97■□□□□ 0.63
CXCL1-202ENST00000509101 PLA2G6O60733 806 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms