RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 KIF13BQ9NQT8 1826 aa10.42□□□□□ -0.74
HTT-205ENST00000509043 PSDA5PKW4 1024 aaPredicted RBP10.42□□□□□ -0.74
HTT-205ENST00000509043 YDJCA8MPS7 323 aa10.42□□□□□ -0.74
HTT-205ENST00000509043 PPP1R3GB7ZBB8 358 aa10.42□□□□□ -0.74
HTT-205ENST00000509043 TBC1D12O60347 775 aa10.42□□□□□ -0.74
HTT-205ENST00000509043 FOSP01100 380 aaPredicted RBP10.42□□□□□ -0.74
HTT-205ENST00000509043 USP11P51784 963 aa10.42□□□□□ -0.74
HTT-205ENST00000509043 DLGAP5Q15398 846 aa10.42□□□□□ -0.74
HTT-205ENST00000509043 CALCRLQ16602 461 aa10.42□□□□□ -0.74
HTT-205ENST00000509043 FILIP1LQ4L180 1135 aa10.42□□□□□ -0.74
HTT-205ENST00000509043 COBLL1Q53SF7 1204 aa10.42□□□□□ -0.74
HTT-205ENST00000509043 CDKAL1Q5VV42 579 aa10.42□□□□□ -0.74
HTT-205ENST00000509043 BTNL9Q6UXG8 535 aa10.42□□□□□ -0.74
HTT-205ENST00000509043 SH3BP5LQ7L8J4 393 aa10.42□□□□□ -0.74
HTT-205ENST00000509043 CABP7Q86V35 215 aa10.42□□□□□ -0.74
HTT-205ENST00000509043 GRAMD1CQ8IYS0 662 aa10.42□□□□□ -0.74
HTT-205ENST00000509043 LARGE2Q8N3Y3 721 aa10.42□□□□□ -0.74
HTT-205ENST00000509043 NOC3LQ8WTT2 800 aaKnown RBP10.42□□□□□ -0.74
HTT-205ENST00000509043 MTMR9Q96QG7 549 aa10.42□□□□□ -0.74
HTT-205ENST00000509043 AMNQ9BXJ7 453 aa10.42□□□□□ -0.74
HTT-205ENST00000509043 TMEM60Q9H2L4 133 aa10.42□□□□□ -0.74
HTT-205ENST00000509043 SH2D4AQ9H788 454 aa10.42□□□□□ -0.74
HTT-205ENST00000509043 PSTPIP2Q9H939 334 aa10.42□□□□□ -0.74
HTT-205ENST00000509043 ARHGEF10LQ9HCE6 1279 aa10.42□□□□□ -0.74
HTT-205ENST00000509043 GINM1Q9NU53 330 aa10.42□□□□□ -0.74
HTT-205ENST00000509043 PAXBP1Q9Y5B6 917 aa10.42□□□□□ -0.74
HTT-205ENST00000509043 SCN9AQ15858 1988 aa10.42□□□□□ -0.74
HTT-205ENST00000509043 SIPA1L1O43166 1804 aa10.42□□□□□ -0.74
HTT-205ENST00000509043 A0A1B0GTH6 734 aa10.41□□□□□ -0.74
HTT-205ENST00000509043 LRRC10BA6NIK2 292 aa10.41□□□□□ -0.74
HTT-205ENST00000509043 H7C1D1 291 aa10.41□□□□□ -0.74
HTT-205ENST00000509043 ADAMTS3O15072 1205 aa10.41□□□□□ -0.74
HTT-205ENST00000509043 RHOBTB3O94955 611 aa10.41□□□□□ -0.74
HTT-205ENST00000509043 ATP1A3P13637 1013 aa10.41□□□□□ -0.74
HTT-205ENST00000509043 EIF6P56537 245 aaKnown RBP10.41□□□□□ -0.74
HTT-205ENST00000509043 CCZ1BP86790 482 aa10.41□□□□□ -0.74
HTT-205ENST00000509043 CCZ1P86791 482 aaPredicted RBP10.41□□□□□ -0.74
HTT-205ENST00000509043 ATP2B2Q01814 1243 aa10.41□□□□□ -0.74
HTT-205ENST00000509043 FMR1Q06787 632 aaKnown RBP eCLIP10.41□□□□□ -0.74
HTT-205ENST00000509043 TCP10Q12799 353 aa10.41□□□□□ -0.74
HTT-205ENST00000509043 PAK1Q13153 545 aa10.41□□□□□ -0.74
HTT-205ENST00000509043 SEPT2Q15019 361 aa10.41□□□□□ -0.74
HTT-205ENST00000509043 SPDYE2Q495Y8 402 aa10.41□□□□□ -0.74
HTT-205ENST00000509043 JAKMIP3Q5VZ66 844 aa10.41□□□□□ -0.74
HTT-205ENST00000509043 SPECC1LQ69YQ0 1117 aa10.41□□□□□ -0.74
HTT-205ENST00000509043 CNNM4Q6P4Q7 775 aa10.41□□□□□ -0.74
HTT-205ENST00000509043 ZFPM1Q8IX07 1006 aa10.41□□□□□ -0.74
HTT-205ENST00000509043 NIM1KQ8IY84 436 aa10.41□□□□□ -0.74
HTT-205ENST00000509043 KCTD17Q8N5Z5 321 aa10.41□□□□□ -0.74
HTT-205ENST00000509043 CSRNP1Q96S65 589 aa10.41□□□□□ -0.74
HTT-205ENST00000509043 C7orf25Q9BPX7 421 aa10.41□□□□□ -0.74
HTT-205ENST00000509043 TDRD3Q9H7E2 651 aaKnown RBP10.41□□□□□ -0.74
HTT-205ENST00000509043 RNF216Q9NWF9 866 aaPredicted RBP10.41□□□□□ -0.74
HTT-205ENST00000509043 ZNF219Q9P2Y4 722 aaPredicted RBP10.41□□□□□ -0.74
HTT-205ENST00000509043 BIN2Q9UBW5 565 aaPredicted RBP10.41□□□□□ -0.74
HTT-205ENST00000509043 ATF5Q9Y2D1 282 aaPredicted RBP10.41□□□□□ -0.74
HTT-205ENST00000509043 R3HCC1Q9Y3T6 440 aaKnown RBP10.41□□□□□ -0.74
HTT-205ENST00000509043 ADAMTSL1Q8N6G6 1762 aa10.41□□□□□ -0.74
HTT-205ENST00000509043 CYP3A7-CYP3A51PA0A087WV96 503 aa10.4□□□□□ -0.74
HTT-205ENST00000509043 PVALEFA0A1B0GWK0 134 aa10.4□□□□□ -0.74
HTT-205ENST00000509043 USP17L10C9JJH3 530 aa10.4□□□□□ -0.74
HTT-205ENST00000509043 F5H6K3 240 aa10.4□□□□□ -0.74
HTT-205ENST00000509043 DYNC1I1O14576 645 aa10.4□□□□□ -0.74
HTT-205ENST00000509043 PSMA7O14818 248 aa10.4□□□□□ -0.74
HTT-205ENST00000509043 TBX3O15119 743 aa10.4□□□□□ -0.74
HTT-205ENST00000509043 PLA2G6O60733 806 aa10.4□□□□□ -0.74
HTT-205ENST00000509043 BMP3P12645 472 aa10.4□□□□□ -0.74
HTT-205ENST00000509043 KCNA3P22001 575 aa10.4□□□□□ -0.74
HTT-205ENST00000509043 CYP3A7P24462 503 aa10.4□□□□□ -0.74
HTT-205ENST00000509043 KLRC3Q07444 240 aa10.4□□□□□ -0.74
HTT-205ENST00000509043 LRMPQ12912 555 aa10.4□□□□□ -0.74
HTT-205ENST00000509043 TBX2Q13207 712 aaPredicted RBP10.4□□□□□ -0.74
HTT-205ENST00000509043 TRIM14Q14142 442 aa10.4□□□□□ -0.74
HTT-205ENST00000509043 NR1I3Q14994 352 aa10.4□□□□□ -0.74
HTT-205ENST00000509043 KARSQ15046 597 aaKnown RBP10.4□□□□□ -0.74
HTT-205ENST00000509043 TPD52L1Q16890 204 aaPredicted RBP10.4□□□□□ -0.74
HTT-205ENST00000509043 QRICH1Q2TAL8 776 aa10.4□□□□□ -0.74
HTT-205ENST00000509043 NAALADL2Q58DX5 795 aa10.4□□□□□ -0.74
HTT-205ENST00000509043 KRT79Q5XKE5 535 aa10.4□□□□□ -0.74
HTT-205ENST00000509043 FOXR2Q6PJQ5 311 aa10.4□□□□□ -0.74
HTT-205ENST00000509043 SLFN12Q8IYM2 578 aa10.4□□□□□ -0.74
HTT-205ENST00000509043 GIMAP8Q8ND71 665 aaPredicted RBP10.4□□□□□ -0.74
HTT-205ENST00000509043 COA7Q96BR5 231 aa10.4□□□□□ -0.74
HTT-205ENST00000509043 DHTKD1Q96HY7 919 aaPredicted RBP10.4□□□□□ -0.74
HTT-205ENST00000509043 PRMT6Q96LA8 375 aaPredicted RBP10.4□□□□□ -0.74
HTT-205ENST00000509043 MTRQ99707 1265 aa10.4□□□□□ -0.74
HTT-205ENST00000509043 NT5C3AQ9H0P0 336 aa10.4□□□□□ -0.74
HTT-205ENST00000509043 CPVLQ9H3G5 476 aa10.4□□□□□ -0.74
HTT-205ENST00000509043 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.4□□□□□ -0.74
HTT-205ENST00000509043 GOPCQ9HD26 462 aa10.4□□□□□ -0.74
HTT-205ENST00000509043 PIM2Q9P1W9 311 aa10.4□□□□□ -0.74
HTT-205ENST00000509043 ZNF70Q9UC06 446 aaPredicted RBP10.4□□□□□ -0.74
HTT-205ENST00000509043 LRWD1Q9UFC0 647 aa10.4□□□□□ -0.74
HTT-205ENST00000509043 LIMA1Q9UHB6 759 aaKnown RBP10.4□□□□□ -0.74
HTT-205ENST00000509043 PCDHA1Q9Y5I3 950 aa10.4□□□□□ -0.74
HTT-205ENST00000509043 MYH4Q9Y623 1939 aa10.4□□□□□ -0.74
HTT-205ENST00000509043 ITIH6Q6UXX5 1313 aa10.39□□□□□ -0.75
HTT-205ENST00000509043 KDM3AQ9Y4C1 1321 aa10.39□□□□□ -0.75
HTT-205ENST00000509043 BICDL2A1A5D9 508 aa10.39□□□□□ -0.75
HTT-205ENST00000509043 GOLGA6L9A6NEM1 432 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms