RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 RGS12O14924 1447 aa4.97□□□□□ -1.61
UBE2D3-226ENST00000508635 TNS3Q68CZ2 1445 aa4.97□□□□□ -1.61
UBE2D3-226ENST00000508635 NCANO14594 1321 aa4.97□□□□□ -1.61
UBE2D3-226ENST00000508635 EIF3AQ14152 1382 aaKnown RBP4.96□□□□□ -1.62
UBE2D3-226ENST00000508635 FAM86C2PA6NEL3 165 aa4.96□□□□□ -1.62
UBE2D3-226ENST00000508635 PRR33A8MZF0 331 aa4.96□□□□□ -1.62
UBE2D3-226ENST00000508635 PRRG2O14669 202 aa4.96□□□□□ -1.62
UBE2D3-226ENST00000508635 ATE1O95260 518 aa4.96□□□□□ -1.62
UBE2D3-226ENST00000508635 RAG1P15918 1043 aa4.96□□□□□ -1.62
UBE2D3-226ENST00000508635 POLR2BP30876 1174 aaKnown RBP4.96□□□□□ -1.62
UBE2D3-226ENST00000508635 GBP1P32455 592 aa4.96□□□□□ -1.62
UBE2D3-226ENST00000508635 NASPP49321 788 aaPredicted RBP4.96□□□□□ -1.62
UBE2D3-226ENST00000508635 OXCT1P55809 520 aa4.96□□□□□ -1.62
UBE2D3-226ENST00000508635 SFRP5Q5T4F7 317 aa4.96□□□□□ -1.62
UBE2D3-226ENST00000508635 REXO1Q8N1G1 1221 aaKnown RBP4.96□□□□□ -1.62
UBE2D3-226ENST00000508635 PPP1R13LQ8WUF5 828 aa4.96□□□□□ -1.62
UBE2D3-226ENST00000508635 CYB5D2Q8WUJ1 264 aa4.96□□□□□ -1.62
UBE2D3-226ENST00000508635 ATG4CQ96DT6 458 aa4.96□□□□□ -1.62
UBE2D3-226ENST00000508635 SIN3AQ96ST3 1273 aa4.96□□□□□ -1.62
UBE2D3-226ENST00000508635 IGSF5Q9NSI5 407 aa4.96□□□□□ -1.62
UBE2D3-226ENST00000508635 GMIPQ9P107 970 aa4.96□□□□□ -1.62
UBE2D3-226ENST00000508635 CEP131Q9UPN4 1083 aa4.96□□□□□ -1.62
UBE2D3-226ENST00000508635 TULP4Q9NRJ4 1543 aa4.96□□□□□ -1.62
UBE2D3-226ENST00000508635 ATRNO75882 1429 aa4.96□□□□□ -1.62
UBE2D3-226ENST00000508635 RGPD8O14715 1765 aaPredicted RBP4.96□□□□□ -1.62
UBE2D3-226ENST00000508635 ARHGEF28Q8N1W1 1705 aaKnown RBP4.95□□□□□ -1.62
UBE2D3-226ENST00000508635 KIAA1210Q9ULL0 1709 aa4.95□□□□□ -1.62
UBE2D3-226ENST00000508635 ARHGEF10O15013 1369 aa4.95□□□□□ -1.62
UBE2D3-226ENST00000508635 GNAT3A8MTJ3 354 aa4.95□□□□□ -1.62
UBE2D3-226ENST00000508635 ITGB5P18084 799 aa4.95□□□□□ -1.62
UBE2D3-226ENST00000508635 GJA8P48165 433 aa4.95□□□□□ -1.62
UBE2D3-226ENST00000508635 MSMPQ1L6U9 139 aa4.95□□□□□ -1.62
UBE2D3-226ENST00000508635 UNC5CLQ8IV45 518 aa4.95□□□□□ -1.62
UBE2D3-226ENST00000508635 SLFN12Q8IYM2 578 aa4.95□□□□□ -1.62
UBE2D3-226ENST00000508635 ABI1Q8IZP0 508 aa4.95□□□□□ -1.62
UBE2D3-226ENST00000508635 DNAJB8Q8NHS0 232 aa4.95□□□□□ -1.62
UBE2D3-226ENST00000508635 NETO1Q8TDF5 533 aa4.95□□□□□ -1.62
UBE2D3-226ENST00000508635 CCDC74BQ96LY2 380 aa4.95□□□□□ -1.62
UBE2D3-226ENST00000508635 CDK19Q9BWU1 502 aa4.95□□□□□ -1.62
UBE2D3-226ENST00000508635 PLAGL2Q9UPG8 496 aa4.95□□□□□ -1.62
UBE2D3-226ENST00000508635 SLIT2O94813 1529 aa4.95□□□□□ -1.62
UBE2D3-226ENST00000508635 ATP7BP35670 1465 aa4.94□□□□□ -1.62
UBE2D3-226ENST00000508635 GPRASP1Q5JY77 1395 aa4.94□□□□□ -1.62
UBE2D3-226ENST00000508635 FAM83GA6ND36 823 aa4.94□□□□□ -1.62
UBE2D3-226ENST00000508635 FAM155AB1AL88 458 aaPredicted RBP4.94□□□□□ -1.62
UBE2D3-226ENST00000508635 CEACAM5P06731 702 aa4.94□□□□□ -1.62
UBE2D3-226ENST00000508635 CHMP4BP1P59074 171 aa4.94□□□□□ -1.62
UBE2D3-226ENST00000508635 BNIP3Q12983 259 aa4.94□□□□□ -1.62
UBE2D3-226ENST00000508635 CDKAL1Q5VV42 579 aa4.94□□□□□ -1.62
UBE2D3-226ENST00000508635 ZNF746Q6NUN9 644 aaPredicted RBP4.94□□□□□ -1.62
UBE2D3-226ENST00000508635 RUFY4Q6ZNE9 571 aa4.94□□□□□ -1.62
UBE2D3-226ENST00000508635 CBLL1Q75N03 491 aa4.94□□□□□ -1.62
UBE2D3-226ENST00000508635 NLRC3Q7RTR2 1065 aa4.94□□□□□ -1.62
UBE2D3-226ENST00000508635 NGDNQ8NEJ9 315 aaKnown RBP4.94□□□□□ -1.62
UBE2D3-226ENST00000508635 RASGRP4Q8TDF6 673 aa4.94□□□□□ -1.62
UBE2D3-226ENST00000508635 CPLX3Q8WVH0 158 aa4.94□□□□□ -1.62
UBE2D3-226ENST00000508635 TMEM40Q8WWA1 233 aa4.94□□□□□ -1.62
UBE2D3-226ENST00000508635 CRBNQ96SW2 442 aa4.94□□□□□ -1.62
UBE2D3-226ENST00000508635 ZNRF3Q9ULT6 936 aa4.94□□□□□ -1.62
UBE2D3-226ENST00000508635 MAPK8IP1Q9UQF2 711 aa4.94□□□□□ -1.62
UBE2D3-226ENST00000508635 TRPM3Q9HCF6 1732 aaPredicted RBP4.94□□□□□ -1.62
UBE2D3-226ENST00000508635 MARF1Q9Y4F3 1742 aaKnown RBP4.94□□□□□ -1.62
UBE2D3-226ENST00000508635 POLR3AO14802 1390 aaPredicted RBP4.93□□□□□ -1.62
UBE2D3-226ENST00000508635 IGF2BP3O00425 579 aaKnown RBP eCLIP4.93□□□□□ -1.62
UBE2D3-226ENST00000508635 LRRN2O75325 713 aa4.93□□□□□ -1.62
UBE2D3-226ENST00000508635 UBOX5O94941 541 aa4.93□□□□□ -1.62
UBE2D3-226ENST00000508635 NME1P15531 152 aaKnown RBP4.93□□□□□ -1.62
UBE2D3-226ENST00000508635 CYP7A1P22680 504 aa4.93□□□□□ -1.62
UBE2D3-226ENST00000508635 CD96P40200 585 aa4.93□□□□□ -1.62
UBE2D3-226ENST00000508635 ETV3P41162 512 aa4.93□□□□□ -1.62
UBE2D3-226ENST00000508635 SOX9P48436 509 aa4.93□□□□□ -1.62
UBE2D3-226ENST00000508635 PKN1Q16512 942 aa4.93□□□□□ -1.62
UBE2D3-226ENST00000508635 NKPD1Q17RQ9 610 aa4.93□□□□□ -1.62
UBE2D3-226ENST00000508635 LRRFIP1Q32MZ4 808 aaKnown RBP4.93□□□□□ -1.62
UBE2D3-226ENST00000508635 CDCP2Q5VXM1 449 aa4.93□□□□□ -1.62
UBE2D3-226ENST00000508635 NPM2Q86SE8 214 aaKnown RBP4.93□□□□□ -1.62
UBE2D3-226ENST00000508635 MFSD4AQ8N468 514 aa4.93□□□□□ -1.62
UBE2D3-226ENST00000508635 ZNF512BQ96KM6 892 aaPredicted RBP4.93□□□□□ -1.62
UBE2D3-226ENST00000508635 PCGF6Q9BYE7 350 aa4.93□□□□□ -1.62
UBE2D3-226ENST00000508635 CNNM2Q9H8M5 875 aa4.93□□□□□ -1.62
UBE2D3-226ENST00000508635 BSDC1Q9NW68 430 aaPredicted RBP4.93□□□□□ -1.62
UBE2D3-226ENST00000508635 RALGAPBQ86X10 1494 aa4.93□□□□□ -1.62
UBE2D3-226ENST00000508635 ACEP12821 1306 aa4.93□□□□□ -1.62
UBE2D3-226ENST00000508635 CENPJQ9HC77 1338 aaPredicted RBP4.93□□□□□ -1.62
UBE2D3-226ENST00000508635 MEIS3P2A8K0S8 358 aa4.92□□□□□ -1.62
UBE2D3-226ENST00000508635 H3BS24 57 aa4.92□□□□□ -1.62
UBE2D3-226ENST00000508635 RGS13O14921 159 aa4.92□□□□□ -1.62
UBE2D3-226ENST00000508635 IMPDH2P12268 514 aa4.92□□□□□ -1.62
UBE2D3-226ENST00000508635 EIF6P56537 245 aaKnown RBP4.92□□□□□ -1.62
UBE2D3-226ENST00000508635 GNL2Q13823 731 aaKnown RBP4.92□□□□□ -1.62
UBE2D3-226ENST00000508635 COL9A2Q14055 689 aaPredicted RBP4.92□□□□□ -1.62
UBE2D3-226ENST00000508635 VPS72Q15906 364 aa4.92□□□□□ -1.62
UBE2D3-226ENST00000508635 IFI16Q16666 785 aaKnown RBP4.92□□□□□ -1.62
UBE2D3-226ENST00000508635 AOC3Q16853 763 aa4.92□□□□□ -1.62
UBE2D3-226ENST00000508635 NBPF8Q3BBV2 869 aa4.92□□□□□ -1.62
UBE2D3-226ENST00000508635 ZNF574Q6ZN55 896 aaPredicted RBP4.92□□□□□ -1.62
UBE2D3-226ENST00000508635 VPS37DQ86XT2 251 aa4.92□□□□□ -1.62
UBE2D3-226ENST00000508635 SPACA3Q8IXA5 215 aa4.92□□□□□ -1.62
UBE2D3-226ENST00000508635 SPATA32Q96LK8 384 aa4.92□□□□□ -1.62
UBE2D3-226ENST00000508635 HSPA12BQ96MM6 686 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms