RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 ZNF467Q7Z7K2 595 aaPredicted RBP10.98□□□□□ -0.65
UBE2D3-223ENST00000508249 SDR42E1Q8WUS8 393 aa10.98□□□□□ -0.65
UBE2D3-223ENST00000508249 EVI5LQ96CN4 794 aa10.98□□□□□ -0.65
UBE2D3-223ENST00000508249 SCLYQ96I15 445 aa10.98□□□□□ -0.65
UBE2D3-223ENST00000508249 OSBPL3Q9H4L5 887 aa10.98□□□□□ -0.65
UBE2D3-223ENST00000508249 CERS4Q9HA82 394 aa10.98□□□□□ -0.65
UBE2D3-223ENST00000508249 DCP1AQ9NPI6 582 aaPredicted RBP10.98□□□□□ -0.65
UBE2D3-223ENST00000508249 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.98□□□□□ -0.65
UBE2D3-223ENST00000508249 COG5Q9UP83 839 aa10.98□□□□□ -0.65
UBE2D3-223ENST00000508249 PRR33A8MZF0 331 aa10.97□□□□□ -0.65
UBE2D3-223ENST00000508249 RNF113AO15541 343 aaKnown RBP10.97□□□□□ -0.65
UBE2D3-223ENST00000508249 ATP2A2P16615 1042 aaKnown RBP10.97□□□□□ -0.65
UBE2D3-223ENST00000508249 SKIV2LQ15477 1246 aaKnown RBP10.97□□□□□ -0.65
UBE2D3-223ENST00000508249 GIMAP6Q6P9H5 292 aa10.97□□□□□ -0.65
UBE2D3-223ENST00000508249 SAMD1Q6SPF0 538 aaPredicted RBP10.97□□□□□ -0.65
UBE2D3-223ENST00000508249 CXCL17Q6UXB2 119 aa10.97□□□□□ -0.65
UBE2D3-223ENST00000508249 PCSK9Q8NBP7 692 aaKnown RBP10.97□□□□□ -0.65
UBE2D3-223ENST00000508249 FSD1Q9BTV5 496 aa10.97□□□□□ -0.65
UBE2D3-223ENST00000508249 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.97□□□□□ -0.65
UBE2D3-223ENST00000508249 LNPKQ9C0E8 428 aa10.97□□□□□ -0.65
UBE2D3-223ENST00000508249 TRPV6Q9H1D0 765 aa10.97□□□□□ -0.65
UBE2D3-223ENST00000508249 GNEQ9Y223 722 aaKnown RBP10.97□□□□□ -0.65
UBE2D3-223ENST00000508249 SLC4A7Q9Y6M7 1214 aa10.97□□□□□ -0.65
UBE2D3-223ENST00000508249 KMT2EQ8IZD2 1858 aa10.96□□□□□ -0.65
UBE2D3-223ENST00000508249 TLR3O15455 904 aaKnown RBP10.96□□□□□ -0.65
UBE2D3-223ENST00000508249 MBD4O95243 580 aa10.96□□□□□ -0.65
UBE2D3-223ENST00000508249 IGHDP01880 384 aa10.96□□□□□ -0.65
UBE2D3-223ENST00000508249 POLR3DP05423 398 aaPredicted RBP10.96□□□□□ -0.65
UBE2D3-223ENST00000508249 CENPBP07199 599 aaPredicted RBP10.96□□□□□ -0.65
UBE2D3-223ENST00000508249 GRB10Q13322 594 aa10.96□□□□□ -0.65
UBE2D3-223ENST00000508249 GNASQ5JWF2 1037 aa10.96□□□□□ -0.65
UBE2D3-223ENST00000508249 FAM83BQ5T0W9 1011 aa10.96□□□□□ -0.65
UBE2D3-223ENST00000508249 TMEM63BQ5T3F8 832 aa10.96□□□□□ -0.65
UBE2D3-223ENST00000508249 ARMCX2Q7L311 632 aa10.96□□□□□ -0.65
UBE2D3-223ENST00000508249 LCORLQ8N3X6 602 aa10.96□□□□□ -0.65
UBE2D3-223ENST00000508249 ANKS1AQ92625 1134 aa10.96□□□□□ -0.65
UBE2D3-223ENST00000508249 MTIF3Q9H2K0 278 aaKnown RBP10.96□□□□□ -0.65
UBE2D3-223ENST00000508249 ARHGEF10LQ9HCE6 1279 aa10.96□□□□□ -0.65
UBE2D3-223ENST00000508249 MCM9Q9NXL9 1143 aa10.96□□□□□ -0.65
UBE2D3-223ENST00000508249 SWAP70Q9UH65 585 aa10.96□□□□□ -0.65
UBE2D3-223ENST00000508249 DDX49Q9Y6V7 483 aaKnown RBP10.96□□□□□ -0.65
UBE2D3-223ENST00000508249 VPS13AQ96RL7 3174 aa10.96□□□□□ -0.66
UBE2D3-223ENST00000508249 TRIP12Q14669 1992 aaPredicted RBP10.96□□□□□ -0.66
UBE2D3-223ENST00000508249 CYP2D7A0A087X1C5 515 aa10.95□□□□□ -0.66
UBE2D3-223ENST00000508249 ATP2A1O14983 1001 aa10.95□□□□□ -0.66
UBE2D3-223ENST00000508249 NEFLP07196 543 aa10.95□□□□□ -0.66
UBE2D3-223ENST00000508249 EEF2P13639 858 aaKnown RBP10.95□□□□□ -0.66
UBE2D3-223ENST00000508249 COPB2P35606 906 aa10.95□□□□□ -0.66
UBE2D3-223ENST00000508249 ITGA7Q13683 1181 aa10.95□□□□□ -0.66
UBE2D3-223ENST00000508249 TSHZ3Q63HK5 1081 aa10.95□□□□□ -0.66
UBE2D3-223ENST00000508249 SNRNP48Q6IEG0 339 aaKnown RBP10.95□□□□□ -0.66
UBE2D3-223ENST00000508249 B4GALNT3Q6L9W6 998 aa10.95□□□□□ -0.66
UBE2D3-223ENST00000508249 OTUD7AQ8TE49 926 aaPredicted RBP10.95□□□□□ -0.66
UBE2D3-223ENST00000508249 HLA-CQ95604 372 aa10.95□□□□□ -0.66
UBE2D3-223ENST00000508249 NUP88Q99567 741 aaPredicted RBP10.95□□□□□ -0.66
UBE2D3-223ENST00000508249 TEX13BQ9BXU2 312 aa10.95□□□□□ -0.66
UBE2D3-223ENST00000508249 ABHD16BQ9H3Z7 469 aa10.95□□□□□ -0.66
UBE2D3-223ENST00000508249 ARMT1Q9H993 441 aa10.95□□□□□ -0.66
UBE2D3-223ENST00000508249 ARPP21Q9UBL0 812 aaPredicted RBP10.95□□□□□ -0.66
UBE2D3-223ENST00000508249 LCHNA4D1U4 455 aa10.94□□□□□ -0.66
UBE2D3-223ENST00000508249 HIP1O00291 1037 aa10.94□□□□□ -0.66
UBE2D3-223ENST00000508249 PSMC6P62333 389 aa10.94□□□□□ -0.66
UBE2D3-223ENST00000508249 SLFNL1Q499Z3 407 aa10.94□□□□□ -0.66
UBE2D3-223ENST00000508249 TMEM67Q5HYA8 995 aa10.94□□□□□ -0.66
UBE2D3-223ENST00000508249 PLEKHM2Q8IWE5 1019 aa10.94□□□□□ -0.66
UBE2D3-223ENST00000508249 FAM178BQ8IXR5 827 aa10.94□□□□□ -0.66
UBE2D3-223ENST00000508249 CCDC144CPQ8IYA2 1237 aa10.94□□□□□ -0.66
UBE2D3-223ENST00000508249 FBXL18Q96ME1 805 aa10.94□□□□□ -0.66
UBE2D3-223ENST00000508249 NACAP1Q9BZK3 213 aa10.94□□□□□ -0.66
UBE2D3-223ENST00000508249 SLC4A4Q9Y6R1 1079 aa10.94□□□□□ -0.66
UBE2D3-223ENST00000508249 COL4A6Q14031 1691 aa10.93□□□□□ -0.66
UBE2D3-223ENST00000508249 ZBBXA8MT70 800 aa10.93□□□□□ -0.66
UBE2D3-223ENST00000508249 GPAA1O43292 621 aa10.93□□□□□ -0.66
UBE2D3-223ENST00000508249 PRKAB2O43741 272 aa10.93□□□□□ -0.66
UBE2D3-223ENST00000508249 GTPBP6O43824 516 aaPredicted RBP10.93□□□□□ -0.66
UBE2D3-223ENST00000508249 CHGBP05060 677 aa10.93□□□□□ -0.66
UBE2D3-223ENST00000508249 MFAP1P55081 439 aaKnown RBP10.93□□□□□ -0.66
UBE2D3-223ENST00000508249 IRX6P78412 446 aaPredicted RBP10.93□□□□□ -0.66
UBE2D3-223ENST00000508249 CNTN2Q02246 1040 aa10.93□□□□□ -0.66
UBE2D3-223ENST00000508249 ZMYM1Q5SVZ6 1142 aa10.93□□□□□ -0.66
UBE2D3-223ENST00000508249 C16orf86Q6ZW13 317 aa10.93□□□□□ -0.66
UBE2D3-223ENST00000508249 TLK2Q86UE8 772 aa10.93□□□□□ -0.66
UBE2D3-223ENST00000508249 FAM133AQ8N9E0 248 aa10.93□□□□□ -0.66
UBE2D3-223ENST00000508249 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.93□□□□□ -0.66
UBE2D3-223ENST00000508249 GDPD5Q8WTR4 605 aa10.93□□□□□ -0.66
UBE2D3-223ENST00000508249 ARNTL2Q8WYA1 636 aa10.93□□□□□ -0.66
UBE2D3-223ENST00000508249 OSBP2Q969R2 916 aa10.93□□□□□ -0.66
UBE2D3-223ENST00000508249 STRBPQ96SI9 672 aaKnown RBP10.93□□□□□ -0.66
UBE2D3-223ENST00000508249 PHOX2BQ99453 314 aa10.93□□□□□ -0.66
UBE2D3-223ENST00000508249 PUS7LQ9H0K6 701 aaKnown RBP10.93□□□□□ -0.66
UBE2D3-223ENST00000508249 ALDH8A1Q9H2A2 487 aaPredicted RBP10.93□□□□□ -0.66
UBE2D3-223ENST00000508249 SH2D4AQ9H788 454 aa10.93□□□□□ -0.66
UBE2D3-223ENST00000508249 ZNF287Q9HBT7 754 aa10.93□□□□□ -0.66
UBE2D3-223ENST00000508249 HELLSQ9NRZ9 838 aa10.93□□□□□ -0.66
UBE2D3-223ENST00000508249 NLRC5Q86WI3 1866 aa10.93□□□□□ -0.66
UBE2D3-223ENST00000508249 TECTAO75443 2155 aa10.93□□□□□ -0.66
UBE2D3-223ENST00000508249 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.92□□□□□ -0.66
UBE2D3-223ENST00000508249 TRIM6-TRIM34B2RNG4 842 aa10.92□□□□□ -0.66
UBE2D3-223ENST00000508249 CYP2C9P11712 490 aa10.92□□□□□ -0.66
UBE2D3-223ENST00000508249 IL9P15248 144 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms