RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 KSR1Q8IVT5 923 aa5.85□□□□□ -1.47
HMGB1P28-201ENST00000507778 STK11IPQ8N1F8 1099 aa5.85□□□□□ -1.47
HMGB1P28-201ENST00000507778 C1orf159Q96HA4 380 aa5.85□□□□□ -1.47
HMGB1P28-201ENST00000507778 CDADC1Q9BWV3 514 aa5.85□□□□□ -1.47
HMGB1P28-201ENST00000507778 TMX1Q9H3N1 280 aa5.85□□□□□ -1.47
HMGB1P28-201ENST00000507778 AP5S1Q9NUS5 200 aa5.85□□□□□ -1.47
HMGB1P28-201ENST00000507778 PLAAQ9Y263 795 aa5.85□□□□□ -1.47
HMGB1P28-201ENST00000507778 BLACEA4D250 179 aa5.84□□□□□ -1.47
HMGB1P28-201ENST00000507778 RPL10P27635 214 aaKnown RBP5.84□□□□□ -1.47
HMGB1P28-201ENST00000507778 TEKQ02763 1124 aa5.84□□□□□ -1.47
HMGB1P28-201ENST00000507778 PABPC4Q13310 644 aaKnown RBP eCLIP5.84□□□□□ -1.47
HMGB1P28-201ENST00000507778 NTRK3Q16288 839 aa5.84□□□□□ -1.47
HMGB1P28-201ENST00000507778 IQCEQ6IPM2 695 aa5.84□□□□□ -1.47
HMGB1P28-201ENST00000507778 DENND5AQ6IQ26 1287 aa5.84□□□□□ -1.47
HMGB1P28-201ENST00000507778 KREMEN2Q8NCW0 462 aa5.84□□□□□ -1.47
HMGB1P28-201ENST00000507778 NPLOC4Q8TAT6 608 aa5.84□□□□□ -1.47
HMGB1P28-201ENST00000507778 FRS2Q8WU20 508 aa5.84□□□□□ -1.47
HMGB1P28-201ENST00000507778 PTPRN2Q92932 1015 aa5.84□□□□□ -1.47
HMGB1P28-201ENST00000507778 NINJ1Q92982 152 aa5.84□□□□□ -1.47
HMGB1P28-201ENST00000507778 SYTL4Q96C24 671 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P28-201ENST00000507778 LMCD1Q9NZU5 365 aa5.84□□□□□ -1.47
HMGB1P28-201ENST00000507778 TRBV23OR9-2A0A075B6M9 112 aa5.83□□□□□ -1.48
HMGB1P28-201ENST00000507778 FGF10O15520 208 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P28-201ENST00000507778 MEFVO15553 781 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P28-201ENST00000507778 EFCAB14O75071 495 aa5.83□□□□□ -1.48
HMGB1P28-201ENST00000507778 C6orf222P0C671 652 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P28-201ENST00000507778 PLS3P13797 630 aa5.83□□□□□ -1.48
HMGB1P28-201ENST00000507778 ACBD5Q5T8D3 534 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P28-201ENST00000507778 WAPLQ7Z5K2 1190 aa5.83□□□□□ -1.48
HMGB1P28-201ENST00000507778 PPIL6Q8IXY8 311 aa5.83□□□□□ -1.48
HMGB1P28-201ENST00000507778 NIM1KQ8IY84 436 aa5.83□□□□□ -1.48
HMGB1P28-201ENST00000507778 NAT16Q8N8M0 369 aa5.83□□□□□ -1.48
HMGB1P28-201ENST00000507778 BCL7CQ8WUZ0 217 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P28-201ENST00000507778 DCAF4Q8WV16 495 aa5.83□□□□□ -1.48
HMGB1P28-201ENST00000507778 PTCHD1Q96NR3 888 aa5.83□□□□□ -1.48
HMGB1P28-201ENST00000507778 CLUHP3Q96NS8 147 aa5.83□□□□□ -1.48
HMGB1P28-201ENST00000507778 CLEC1BQ9P126 229 aa5.83□□□□□ -1.48
HMGB1P28-201ENST00000507778 NDOR1Q9UHB4 597 aa5.83□□□□□ -1.48
HMGB1P28-201ENST00000507778 SFMBT1Q9UHJ3 866 aa5.83□□□□□ -1.48
HMGB1P28-201ENST00000507778 SLC5A6Q9Y289 635 aa5.83□□□□□ -1.48
HMGB1P28-201ENST00000507778 NPHP3-ACAD11A0A0J9YXS1 232 aa5.82□□□□□ -1.48
HMGB1P28-201ENST00000507778 TMEM82A0PJX8 343 aa5.82□□□□□ -1.48
HMGB1P28-201ENST00000507778 KCNQ2O43526 872 aa5.82□□□□□ -1.48
HMGB1P28-201ENST00000507778 DNAJC6O75061 913 aa5.82□□□□□ -1.48
HMGB1P28-201ENST00000507778 TBC1D8O95759 1140 aa5.82□□□□□ -1.48
HMGB1P28-201ENST00000507778 PRNPP04156 253 aa5.82□□□□□ -1.48
HMGB1P28-201ENST00000507778 PAMP19021 973 aa5.82□□□□□ -1.48
HMGB1P28-201ENST00000507778 LTBRP36941 435 aa5.82□□□□□ -1.48
HMGB1P28-201ENST00000507778 CD96P40200 585 aa5.82□□□□□ -1.48
HMGB1P28-201ENST00000507778 MASP1P48740 699 aa5.82□□□□□ -1.48
HMGB1P28-201ENST00000507778 TESK1Q15569 626 aa5.82□□□□□ -1.48
HMGB1P28-201ENST00000507778 TRIM61Q5EBN2 209 aa5.82□□□□□ -1.48
HMGB1P28-201ENST00000507778 E4F1Q66K89 784 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P28-201ENST00000507778 MAMDC2Q7Z304 686 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P28-201ENST00000507778 FILIP1Q7Z7B0 1213 aa5.82□□□□□ -1.48
HMGB1P28-201ENST00000507778 DHX37Q8IY37 1157 aaKnown RBP5.82□□□□□ -1.48
HMGB1P28-201ENST00000507778 SLC7A14Q8TBB6 771 aa5.82□□□□□ -1.48
HMGB1P28-201ENST00000507778 MFSD3Q96ES6 412 aa5.82□□□□□ -1.48
HMGB1P28-201ENST00000507778 CARS2Q9HA77 564 aaKnown RBP5.82□□□□□ -1.48
HMGB1P28-201ENST00000507778 SPC25Q9HBM1 224 aa5.82□□□□□ -1.48
HMGB1P28-201ENST00000507778 IFT57Q9NWB7 429 aa5.82□□□□□ -1.48
HMGB1P28-201ENST00000507778 ZNF281Q9Y2X9 895 aa5.82□□□□□ -1.48
HMGB1P28-201ENST00000507778 AQP7O14520 342 aa5.81□□□□□ -1.48
HMGB1P28-201ENST00000507778 MED26O95402 600 aa5.81□□□□□ -1.48
HMGB1P28-201ENST00000507778 APPP05067 770 aa5.81□□□□□ -1.48
HMGB1P28-201ENST00000507778 ZP2Q05996 745 aa5.81□□□□□ -1.48
HMGB1P28-201ENST00000507778 ANGEL2Q5VTE6 544 aaKnown RBP5.81□□□□□ -1.48
HMGB1P28-201ENST00000507778 STYK1Q6J9G0 422 aa5.81□□□□□ -1.48
HMGB1P28-201ENST00000507778 RSPO2Q6UXX9 243 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P28-201ENST00000507778 CYP2R1Q6VVX0 501 aa5.81□□□□□ -1.48
HMGB1P28-201ENST00000507778 ZPBP2Q6X784 338 aa5.81□□□□□ -1.48
HMGB1P28-201ENST00000507778 GSTCDQ8NEC7 633 aa5.81□□□□□ -1.48
HMGB1P28-201ENST00000507778 DIO2Q92813 273 aa5.81□□□□□ -1.48
HMGB1P28-201ENST00000507778 PUS7Q96PZ0 661 aaKnown RBP5.81□□□□□ -1.48
HMGB1P28-201ENST00000507778 MMP19Q99542 508 aa5.81□□□□□ -1.48
HMGB1P28-201ENST00000507778 PHF20Q9BVI0 1012 aa5.81□□□□□ -1.48
HMGB1P28-201ENST00000507778 SLC52A2Q9HAB3 445 aa5.81□□□□□ -1.48
HMGB1P28-201ENST00000507778 GPR27Q9NS67 375 aa5.81□□□□□ -1.48
HMGB1P28-201ENST00000507778 TMEFF2Q9UIK5 374 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P28-201ENST00000507778 TRAF6Q9Y4K3 522 aa5.81□□□□□ -1.48
HMGB1P28-201ENST00000507778 NPFFR2Q9Y5X5 522 aa5.81□□□□□ -1.48
HMGB1P28-201ENST00000507778 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P28-201ENST00000507778 ARNTLO00327 626 aa5.8□□□□□ -1.48
HMGB1P28-201ENST00000507778 IRS4O14654 1257 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P28-201ENST00000507778 CD8BP10966 210 aa5.8□□□□□ -1.48
HMGB1P28-201ENST00000507778 ITGB7P26010 798 aa5.8□□□□□ -1.48
HMGB1P28-201ENST00000507778 SSTR4P31391 388 aa5.8□□□□□ -1.48
HMGB1P28-201ENST00000507778 KCNAB2Q13303 367 aa5.8□□□□□ -1.48
HMGB1P28-201ENST00000507778 TM4SF20Q53R12 229 aa5.8□□□□□ -1.48
HMGB1P28-201ENST00000507778 HLA-DQA1Q5Y7H0 255 aa5.8□□□□□ -1.48
HMGB1P28-201ENST00000507778 KCNT2Q6UVM3 1135 aa5.8□□□□□ -1.48
HMGB1P28-201ENST00000507778 SPRED2Q7Z698 418 aa5.8□□□□□ -1.48
HMGB1P28-201ENST00000507778 VSIG10LQ86VR7 867 aa5.8□□□□□ -1.48
HMGB1P28-201ENST00000507778 DTX1Q86Y01 620 aa5.8□□□□□ -1.48
HMGB1P28-201ENST00000507778 FCRL2Q96LA5 508 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P28-201ENST00000507778 MAGEB10Q96LZ2 347 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P28-201ENST00000507778 ZFYVE21Q9BQ24 234 aa5.8□□□□□ -1.48
HMGB1P28-201ENST00000507778 TRIM39Q9HCM9 518 aa5.8□□□□□ -1.48
HMGB1P28-201ENST00000507778 INTS7Q9NVH2 962 aaKnown RBP5.8□□□□□ -1.48
HMGB1P28-201ENST00000507778 ERVK13-1Q9NX77 482 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms