RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 PSMC4P43686 418 aa23.16■■□□□ 1.3
USP53-203ENST00000507597 KCTD2Q14681 263 aa23.16■■□□□ 1.3
USP53-203ENST00000507597 PFKFB3Q16875 520 aaPredicted RBP23.16■■□□□ 1.3
USP53-203ENST00000507597 USH1GQ495M9 461 aa23.16■■□□□ 1.3
USP53-203ENST00000507597 ABRAQ8N0Z2 381 aa23.16■■□□□ 1.3
USP53-203ENST00000507597 ZNF296Q8WUU4 475 aaPredicted RBP23.16■■□□□ 1.3
USP53-203ENST00000507597 PHKBQ93100 1093 aa23.16■■□□□ 1.3
USP53-203ENST00000507597 R3HDMLQ9H3Y0 253 aa23.16■■□□□ 1.3
USP53-203ENST00000507597 RNF146Q9NTX7 359 aa23.16■■□□□ 1.3
USP53-203ENST00000507597 MAP3K20Q9NYL2 800 aaKnown RBP23.16■■□□□ 1.3
USP53-203ENST00000507597 RLFQ13129 1914 aa23.16■■□□□ 1.3
USP53-203ENST00000507597 LARGE1O95461 756 aa23.15■■□□□ 1.3
USP53-203ENST00000507597 PRMT2P55345 433 aa23.15■■□□□ 1.3
USP53-203ENST00000507597 PPP1R18Q6NYC8 613 aa23.15■■□□□ 1.3
USP53-203ENST00000507597 HEATR3Q7Z4Q2 680 aa23.15■■□□□ 1.3
USP53-203ENST00000507597 ANKRD35Q8N283 1001 aa23.15■■□□□ 1.3
USP53-203ENST00000507597 FAM184AQ8NB25 1140 aa23.15■■□□□ 1.3
USP53-203ENST00000507597 RGS22Q8NE09 1264 aa23.15■■□□□ 1.3
USP53-203ENST00000507597 CCDC148Q8NFR7 591 aa23.15■■□□□ 1.3
USP53-203ENST00000507597 ORC3Q9UBD5 711 aaPredicted RBP23.15■■□□□ 1.3
USP53-203ENST00000507597 PFASO15067 1338 aa23.14■■□□□ 1.3
USP53-203ENST00000507597 HSP90AA1P07900 732 aaKnown RBP23.14■■□□□ 1.29
USP53-203ENST00000507597 POTEEQ6S8J3 1075 aa23.14■■□□□ 1.29
USP53-203ENST00000507597 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.14■■□□□ 1.29
USP53-203ENST00000507597 GPR142Q7Z601 462 aa23.14■■□□□ 1.29
USP53-203ENST00000507597 SOCS4Q8WXH5 440 aa23.14■■□□□ 1.29
USP53-203ENST00000507597 CUL5Q93034 780 aa23.14■■□□□ 1.29
USP53-203ENST00000507597 DDX11Q96FC9 970 aa23.14■■□□□ 1.29
USP53-203ENST00000507597 MMP19Q99542 508 aa23.14■■□□□ 1.29
USP53-203ENST00000507597 EFCC1Q9HA90 598 aa23.14■■□□□ 1.29
USP53-203ENST00000507597 SH3GLB2Q9NR46 395 aa23.14■■□□□ 1.29
USP53-203ENST00000507597 HOMER2Q9NSB8 354 aa23.14■■□□□ 1.29
USP53-203ENST00000507597 PARP14Q460N5 1801 aa23.14■■□□□ 1.29
USP53-203ENST00000507597 A0A0G2JMZ2 1700 aa23.13■■□□□ 1.29
USP53-203ENST00000507597 PTPDC1A2A3K4 754 aa23.13■■□□□ 1.29
USP53-203ENST00000507597 SLC15A5A6NIM6 579 aa23.13■■□□□ 1.29
USP53-203ENST00000507597 FOXN1O15353 648 aa23.13■■□□□ 1.29
USP53-203ENST00000507597 CD2BP2O95400 341 aaKnown RBP23.13■■□□□ 1.29
USP53-203ENST00000507597 NAPAP54920 295 aa23.13■■□□□ 1.29
USP53-203ENST00000507597 TRIM29Q14134 588 aa23.13■■□□□ 1.29
USP53-203ENST00000507597 SLC35G1Q2M3R5 365 aa23.13■■□□□ 1.29
USP53-203ENST00000507597 NSUN7Q8NE18 718 aaKnown RBP23.13■■□□□ 1.29
USP53-203ENST00000507597 NUDT12Q9BQG2 462 aa23.13■■□□□ 1.29
USP53-203ENST00000507597 PORCNQ9H237 461 aa23.13■■□□□ 1.29
USP53-203ENST00000507597 BARHL2Q9NY43 387 aa23.13■■□□□ 1.29
USP53-203ENST00000507597 TSKSQ9UJT2 592 aa23.13■■□□□ 1.29
USP53-203ENST00000507597 HSPA8P11142 646 aaKnown RBP23.12■■□□□ 1.29
USP53-203ENST00000507597 PTPREP23469 700 aa23.12■■□□□ 1.29
USP53-203ENST00000507597 GNA11P29992 359 aa23.12■■□□□ 1.29
USP53-203ENST00000507597 MRPL12P52815 198 aaKnown RBP23.12■■□□□ 1.29
USP53-203ENST00000507597 CD99L2Q8TCZ2 262 aa23.12■■□□□ 1.29
USP53-203ENST00000507597 BICD2Q8TD16 824 aa23.12■■□□□ 1.29
USP53-203ENST00000507597 INTS4Q96HW7 963 aaKnown RBP23.12■■□□□ 1.29
USP53-203ENST00000507597 SMC3Q9UQE7 1217 aa23.12■■□□□ 1.29
USP53-203ENST00000507597 RIPK3Q9Y572 518 aa23.12■■□□□ 1.29
USP53-203ENST00000507597 ANP32AP39687 249 aaKnown RBP23.11■■□□□ 1.29
USP53-203ENST00000507597 CUL4AQ13619 759 aa23.11■■□□□ 1.29
USP53-203ENST00000507597 MCTP2Q6DN12 878 aa23.11■■□□□ 1.29
USP53-203ENST00000507597 MPHOSPH6Q99547 160 aaKnown RBP23.11■■□□□ 1.29
USP53-203ENST00000507597 C6orf50Q9HD87 102 aa23.11■■□□□ 1.29
USP53-203ENST00000507597 hCG_1642624A0A1W2PR95 340 aa23.1■■□□□ 1.29
USP53-203ENST00000507597 B4DLN1 442 aa23.1■■□□□ 1.29
USP53-203ENST00000507597 GALNT17Q6IS24 598 aa23.1■■□□□ 1.29
USP53-203ENST00000507597 NSMFQ6X4W1 530 aa23.1■■□□□ 1.29
USP53-203ENST00000507597 RNF207Q6ZRF8 634 aa23.1■■□□□ 1.29
USP53-203ENST00000507597 DPP9Q86TI2 863 aa23.1■■□□□ 1.29
USP53-203ENST00000507597 SMARCC2Q8TAQ2 1214 aa23.1■■□□□ 1.29
USP53-203ENST00000507597 PSTPIP2Q9H939 334 aa23.1■■□□□ 1.29
USP53-203ENST00000507597 GCOM1H8Y6P7 765 aaPredicted RBP23.09■■□□□ 1.29
USP53-203ENST00000507597 PEX10O60683 326 aa23.09■■□□□ 1.29
USP53-203ENST00000507597 CTDNEP1O95476 244 aa23.09■■□□□ 1.29
USP53-203ENST00000507597 POLR2MP0CAP2 368 aa23.09■■□□□ 1.29
USP53-203ENST00000507597 CALML3P27482 149 aa23.09■■□□□ 1.29
USP53-203ENST00000507597 RGS2P41220 211 aa23.09■■□□□ 1.29
USP53-203ENST00000507597 LBX1P52954 281 aa23.09■■□□□ 1.29
USP53-203ENST00000507597 PKN1Q16512 942 aa23.09■■□□□ 1.29
USP53-203ENST00000507597 WWC2Q6AWC2 1192 aa23.09■■□□□ 1.29
USP53-203ENST00000507597 TRMT44Q8IYL2 757 aaKnown RBP23.09■■□□□ 1.29
USP53-203ENST00000507597 ALG1Q9BT22 464 aa23.09■■□□□ 1.29
USP53-203ENST00000507597 BRMS1Q9HCU9 246 aa23.09■■□□□ 1.29
USP53-203ENST00000507597 DAXXQ9UER7 740 aaPredicted RBP23.09■■□□□ 1.29
USP53-203ENST00000507597 ESYT2A0FGR8 921 aa23.08■■□□□ 1.29
USP53-203ENST00000507597 POTEB2H3BUK9 544 aa23.08■■□□□ 1.29
USP53-203ENST00000507597 PPP1R11O60927 126 aaPredicted RBP23.08■■□□□ 1.29
USP53-203ENST00000507597 CFBP00751 764 aa23.08■■□□□ 1.29
USP53-203ENST00000507597 NLRP5P59047 1200 aa23.08■■□□□ 1.29
USP53-203ENST00000507597 GRB14Q14449 540 aa23.08■■□□□ 1.29
USP53-203ENST00000507597 GPKOWQ92917 476 aaPredicted RBP eCLIP23.08■■□□□ 1.29
USP53-203ENST00000507597 TRIM47Q96LD4 638 aa23.08■■□□□ 1.29
USP53-203ENST00000507597 EHMT1Q9H9B1 1298 aa23.08■■□□□ 1.29
USP53-203ENST00000507597 ADD3Q9UEY8 706 aaKnown RBP23.08■■□□□ 1.29
USP53-203ENST00000507597 COL11A1P12107 1806 aaPredicted RBP23.08■■□□□ 1.28
USP53-203ENST00000507597 SMCO2A6NFE2 343 aa23.07■■□□□ 1.28
USP53-203ENST00000507597 STXBP3O00186 592 aa23.07■■□□□ 1.28
USP53-203ENST00000507597 PDIA4P13667 645 aaKnown RBP23.07■■□□□ 1.28
USP53-203ENST00000507597 ADCY7P51828 1080 aa23.07■■□□□ 1.28
USP53-203ENST00000507597 MAP2K5Q13163 448 aa23.07■■□□□ 1.28
USP53-203ENST00000507597 MUM1L1Q5H9M0 696 aa23.07■■□□□ 1.28
USP53-203ENST00000507597 CLEC4DQ8WXI8 215 aa23.07■■□□□ 1.28
USP53-203ENST00000507597 PRDM10Q9NQV6 1147 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms