RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 BMP3P12645 472 aa19.62■□□□□ 0.73
SNF8-205ENST00000507302 IGFBP4P22692 258 aa19.62■□□□□ 0.73
SNF8-205ENST00000507302 TKFCQ3LXA3 575 aa19.62■□□□□ 0.73
SNF8-205ENST00000507302 IQSEC1Q6DN90 963 aa19.62■□□□□ 0.73
SNF8-205ENST00000507302 RPUSD2Q8IZ73 545 aaKnown RBP19.62■□□□□ 0.73
SNF8-205ENST00000507302 KBTBD3Q8NAB2 608 aa19.62■□□□□ 0.73
SNF8-205ENST00000507302 NEDD1Q8NHV4 660 aa19.62■□□□□ 0.73
SNF8-205ENST00000507302 APPBP2Q92624 585 aa19.62■□□□□ 0.73
SNF8-205ENST00000507302 GMCL1Q96IK5 515 aa19.62■□□□□ 0.73
SNF8-205ENST00000507302 TRPV6Q9H1D0 765 aa19.62■□□□□ 0.73
SNF8-205ENST00000507302 MINDY4BA8MYZ0 360 aa19.61■□□□□ 0.73
SNF8-205ENST00000507302 ZNF287Q9HBT7 754 aa19.61■□□□□ 0.73
SNF8-205ENST00000507302 ARIH1Q9Y4X5 557 aaPredicted RBP19.61■□□□□ 0.73
SNF8-205ENST00000507302 CTDP1Q9Y5B0 961 aaPredicted RBP19.61■□□□□ 0.73
SNF8-205ENST00000507302 SLC4A7Q9Y6M7 1214 aa19.61■□□□□ 0.73
SNF8-205ENST00000507302 SCN5AQ14524 2016 aa19.61■□□□□ 0.73
SNF8-205ENST00000507302 SCN10AQ9Y5Y9 1956 aa19.61■□□□□ 0.73
SNF8-205ENST00000507302 ERC2O15083 957 aa19.6■□□□□ 0.73
SNF8-205ENST00000507302 PFKMP08237 780 aa19.6■□□□□ 0.73
SNF8-205ENST00000507302 GNAT2P19087 354 aa19.6■□□□□ 0.73
SNF8-205ENST00000507302 PTGS1P23219 599 aa19.6■□□□□ 0.73
SNF8-205ENST00000507302 SLC4A3P48751 1232 aa19.6■□□□□ 0.73
SNF8-205ENST00000507302 STAT2P52630 851 aa19.6■□□□□ 0.73
SNF8-205ENST00000507302 RABGGTBP53611 331 aa19.6■□□□□ 0.73
SNF8-205ENST00000507302 CCL23P55773 120 aa19.6■□□□□ 0.73
SNF8-205ENST00000507302 SLFN13Q68D06 897 aa19.6■□□□□ 0.73
SNF8-205ENST00000507302 FAM160B2Q86V87 743 aa19.6■□□□□ 0.73
SNF8-205ENST00000507302 ZNF444Q8N0Y2 327 aaPredicted RBP19.6■□□□□ 0.73
SNF8-205ENST00000507302 TSPYL2Q9H2G4 693 aaPredicted RBP19.6■□□□□ 0.73
SNF8-205ENST00000507302 RNF146Q9NTX7 359 aa19.6■□□□□ 0.73
SNF8-205ENST00000507302 TANC1Q9C0D5 1861 aa19.59■□□□□ 0.73
SNF8-205ENST00000507302 TMEM232C9JQI7 657 aa19.59■□□□□ 0.73
SNF8-205ENST00000507302 GPAA1O43292 621 aa19.59■□□□□ 0.73
SNF8-205ENST00000507302 ZEB2O60315 1214 aa19.59■□□□□ 0.73
SNF8-205ENST00000507302 MYOGP15173 224 aa19.59■□□□□ 0.73
SNF8-205ENST00000507302 TMEM63BQ5T3F8 832 aa19.59■□□□□ 0.73
SNF8-205ENST00000507302 PPP2R2DQ66LE6 453 aa19.59■□□□□ 0.73
SNF8-205ENST00000507302 LRRC47Q8N1G4 583 aaKnown RBP19.59■□□□□ 0.73
SNF8-205ENST00000507302 CHURC1Q8WUH1 139 aa19.59■□□□□ 0.73
SNF8-205ENST00000507302 STAG1Q8WVM7 1258 aa19.59■□□□□ 0.73
SNF8-205ENST00000507302 C1QTNF1Q9BXJ1 281 aa19.59■□□□□ 0.73
SNF8-205ENST00000507302 LRRCC1Q9C099 1032 aa19.59■□□□□ 0.73
SNF8-205ENST00000507302 AP5M1Q9H0R1 490 aa19.59■□□□□ 0.73
SNF8-205ENST00000507302 ALDH8A1Q9H2A2 487 aaPredicted RBP19.59■□□□□ 0.73
SNF8-205ENST00000507302 PDGFCQ9NRA1 345 aa19.59■□□□□ 0.73
SNF8-205ENST00000507302 HOMER2Q9NSB8 354 aa19.59■□□□□ 0.73
SNF8-205ENST00000507302 ECHDC1Q9NTX5 307 aa19.59■□□□□ 0.73
SNF8-205ENST00000507302 CYP39A1Q9NYL5 469 aa19.59■□□□□ 0.73
SNF8-205ENST00000507302 RNF113AO15541 343 aaKnown RBP19.58■□□□□ 0.72
SNF8-205ENST00000507302 DYNC1LI2O43237 492 aaPredicted RBP19.58■□□□□ 0.72
SNF8-205ENST00000507302 PRDM1O75626 825 aa19.58■□□□□ 0.72
SNF8-205ENST00000507302 AAK1Q2M2I8 961 aa19.58■□□□□ 0.72
SNF8-205ENST00000507302 STK11IPQ8N1F8 1099 aa19.58■□□□□ 0.72
SNF8-205ENST00000507302 NECAB3Q96P71 396 aaPredicted RBP19.58■□□□□ 0.72
SNF8-205ENST00000507302 TRERF1Q96PN7 1200 aa19.58■□□□□ 0.72
SNF8-205ENST00000507302 VTA1Q9NP79 307 aa19.58■□□□□ 0.72
SNF8-205ENST00000507302 COG6Q9Y2V7 657 aa19.58■□□□□ 0.72
SNF8-205ENST00000507302 MTCH2Q9Y6C9 303 aa19.58■□□□□ 0.72
SNF8-205ENST00000507302 LOC102724159A0A0B4J2E5 919 aa19.57■□□□□ 0.72
SNF8-205ENST00000507302 PATL2C9JE40 543 aaKnown RBP19.57■□□□□ 0.72
SNF8-205ENST00000507302 ZFYP08048 801 aaPredicted RBP19.57■□□□□ 0.72
SNF8-205ENST00000507302 ATP2A2P16615 1042 aaKnown RBP19.57■□□□□ 0.72
SNF8-205ENST00000507302 HOXD11P31277 338 aaPredicted RBP19.57■□□□□ 0.72
SNF8-205ENST00000507302 PSMC6P62333 389 aa19.57■□□□□ 0.72
SNF8-205ENST00000507302 TFF2Q03403 129 aa19.57■□□□□ 0.72
SNF8-205ENST00000507302 TTLL4Q14679 1199 aa19.57■□□□□ 0.72
SNF8-205ENST00000507302 PWP2Q15269 919 aaKnown RBP19.57■□□□□ 0.72
SNF8-205ENST00000507302 DUSP28Q4G0W2 176 aa19.57■□□□□ 0.72
SNF8-205ENST00000507302 IFNL3Q8IZI9 196 aa19.57■□□□□ 0.72
SNF8-205ENST00000507302 PTPRSQ13332 1948 aa19.57■□□□□ 0.72
SNF8-205ENST00000507302 RBM47A0AV96 593 aaKnown RBP19.56■□□□□ 0.72
SNF8-205ENST00000507302 NOVP48745 357 aa19.56■□□□□ 0.72
SNF8-205ENST00000507302 HNRNPUQ00839 825 aaKnown RBP eCLIP19.56■□□□□ 0.72
SNF8-205ENST00000507302 NOL8Q76FK4 1167 aaKnown RBP19.56■□□□□ 0.72
SNF8-205ENST00000507302 IL27Q8NEV9 243 aa19.56■□□□□ 0.72
SNF8-205ENST00000507302 FAM122AQ96E09 287 aa19.56■□□□□ 0.72
SNF8-205ENST00000507302 SCLYQ96I15 445 aa19.56■□□□□ 0.72
SNF8-205ENST00000507302 DDX49Q9Y6V7 483 aaKnown RBP19.56■□□□□ 0.72
SNF8-205ENST00000507302 M0R2C6 588 aa19.55■□□□□ 0.72
SNF8-205ENST00000507302 SUPT20HL2P0C7V6 817 aa19.55■□□□□ 0.72
SNF8-205ENST00000507302 KCNQ1P51787 676 aa19.55■□□□□ 0.72
SNF8-205ENST00000507302 PURAQ00577 322 aaKnown RBP19.55■□□□□ 0.72
SNF8-205ENST00000507302 MUM1L1Q5H9M0 696 aa19.55■□□□□ 0.72
SNF8-205ENST00000507302 FBXO16Q8IX29 292 aaPredicted RBP19.55■□□□□ 0.72
SNF8-205ENST00000507302 PHOSPHO2Q8TCD6 241 aa19.55■□□□□ 0.72
SNF8-205ENST00000507302 CHMP4BQ9H444 224 aaKnown RBP19.55■□□□□ 0.72
SNF8-205ENST00000507302 TET1Q8NFU7 2136 aa19.54■□□□□ 0.72
SNF8-205ENST00000507302 TSPY3P0CV98 308 aa19.54■□□□□ 0.72
SNF8-205ENST00000507302 TSPY8P0CW00 308 aa19.54■□□□□ 0.72
SNF8-205ENST00000507302 RFC2P35250 354 aa19.54■□□□□ 0.72
SNF8-205ENST00000507302 SLC1A4P43007 532 aa19.54■□□□□ 0.72
SNF8-205ENST00000507302 TDO2P48775 406 aa19.54■□□□□ 0.72
SNF8-205ENST00000507302 TMEM67Q5HYA8 995 aa19.54■□□□□ 0.72
SNF8-205ENST00000507302 RCSD1Q6JBY9 416 aa19.54■□□□□ 0.72
SNF8-205ENST00000507302 POLR3EQ9NVU0 708 aa19.54■□□□□ 0.72
SNF8-205ENST00000507302 PRR12Q9ULL5 1215 aa19.54■□□□□ 0.72
SNF8-205ENST00000507302 COG5Q9UP83 839 aa19.54■□□□□ 0.72
SNF8-205ENST00000507302 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.54■□□□□ 0.72
SNF8-205ENST00000507302 TNKSO95271 1327 aa19.53■□□□□ 0.72
SNF8-205ENST00000507302 EPOPA6NHQ4 379 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms