RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 STX6O43752 255 aa16.33■□□□□ 0.2
RNF4-208ENST00000507247 ALAS1P13196 640 aa16.33■□□□□ 0.2
RNF4-208ENST00000507247 PDCP20941 246 aa16.33■□□□□ 0.2
RNF4-208ENST00000507247 MAP2K2P36507 400 aa16.33■□□□□ 0.2
RNF4-208ENST00000507247 STAT3P40763 770 aa16.33■□□□□ 0.2
RNF4-208ENST00000507247 GCLCP48506 637 aaPredicted RBP16.33■□□□□ 0.2
RNF4-208ENST00000507247 Q3C1V9 767 aa16.33■□□□□ 0.2
RNF4-208ENST00000507247 MUM1L1Q5H9M0 696 aa16.33■□□□□ 0.2
RNF4-208ENST00000507247 PPP1R18Q6NYC8 613 aa16.33■□□□□ 0.2
RNF4-208ENST00000507247 ANKRD13CQ8N6S4 541 aa16.33■□□□□ 0.2
RNF4-208ENST00000507247 CCDC148Q8NFR7 591 aa16.33■□□□□ 0.2
RNF4-208ENST00000507247 TEX13BQ9BXU2 312 aa16.33■□□□□ 0.2
RNF4-208ENST00000507247 SPATC1LQ9H0A9 340 aa16.33■□□□□ 0.2
RNF4-208ENST00000507247 R3HDMLQ9H3Y0 253 aa16.33■□□□□ 0.2
RNF4-208ENST00000507247 MTMR6Q9Y217 621 aa16.33■□□□□ 0.2
RNF4-208ENST00000507247 ABCB11O95342 1321 aa16.33■□□□□ 0.2
RNF4-208ENST00000507247 ESYT2A0FGR8 921 aa16.32■□□□□ 0.2
RNF4-208ENST00000507247 VPS37CA5D8V6 355 aaPredicted RBP16.32■□□□□ 0.2
RNF4-208ENST00000507247 CAPN15O75808 1086 aa16.32■□□□□ 0.2
RNF4-208ENST00000507247 MMP1P03956 469 aa16.32■□□□□ 0.2
RNF4-208ENST00000507247 LCTP09848 1927 aa16.32■□□□□ 0.2
RNF4-208ENST00000507247 XBP1P17861 261 aa16.32■□□□□ 0.2
RNF4-208ENST00000507247 NLRP5P59047 1200 aa16.32■□□□□ 0.2
RNF4-208ENST00000507247 ERVK-9P63128 1117 aa16.32■□□□□ 0.2
RNF4-208ENST00000507247 ERVK-24P63145 666 aa16.32■□□□□ 0.2
RNF4-208ENST00000507247 CRHR2Q13324 411 aa16.32■□□□□ 0.2
RNF4-208ENST00000507247 TRIM29Q14134 588 aa16.32■□□□□ 0.2
RNF4-208ENST00000507247 RIOX2Q8IUF8 465 aa16.32■□□□□ 0.2
RNF4-208ENST00000507247 REM2Q8IYK8 340 aaPredicted RBP16.32■□□□□ 0.2
RNF4-208ENST00000507247 CLEC4DQ8WXI8 215 aa16.32■□□□□ 0.2
RNF4-208ENST00000507247 MOV10L1Q9BXT6 1211 aaKnown RBP16.32■□□□□ 0.2
RNF4-208ENST00000507247 ZMYND12Q9H0C1 365 aa16.32■□□□□ 0.2
RNF4-208ENST00000507247 HOMER2Q9NSB8 354 aa16.32■□□□□ 0.2
RNF4-208ENST00000507247 MORF4L1Q9UBU8 362 aa16.32■□□□□ 0.2
RNF4-208ENST00000507247 CPA4Q9UI42 421 aa16.32■□□□□ 0.2
RNF4-208ENST00000507247 MYH15Q9Y2K3 1946 aa16.32■□□□□ 0.2
RNF4-208ENST00000507247 PLXNB2O15031 1838 aa16.31■□□□□ 0.2
RNF4-208ENST00000507247 SMCO2A6NFE2 343 aa16.31■□□□□ 0.2
RNF4-208ENST00000507247 H3BQV1 296 aa16.31■□□□□ 0.2
RNF4-208ENST00000507247 NFIBO00712 420 aa16.31■□□□□ 0.2
RNF4-208ENST00000507247 CA12O43570 354 aa16.31■□□□□ 0.2
RNF4-208ENST00000507247 TLR2O60603 784 aa16.31■□□□□ 0.2
RNF4-208ENST00000507247 BCRP11274 1271 aa16.31■□□□□ 0.2
RNF4-208ENST00000507247 TRAF1Q13077 416 aa16.31■□□□□ 0.2
RNF4-208ENST00000507247 FAM177A1Q8N128 213 aaPredicted RBP16.31■□□□□ 0.2
RNF4-208ENST00000507247 RGS22Q8NE09 1264 aa16.31■□□□□ 0.2
RNF4-208ENST00000507247 OXER1Q8TDS5 423 aa16.31■□□□□ 0.2
RNF4-208ENST00000507247 CCDC12Q8WUD4 166 aaPredicted RBP16.31■□□□□ 0.2
RNF4-208ENST00000507247 TBC1D5Q92609 795 aa16.31■□□□□ 0.2
RNF4-208ENST00000507247 TRERF1Q96PN7 1200 aa16.31■□□□□ 0.2
RNF4-208ENST00000507247 ZFYVE28Q9HCC9 887 aa16.31■□□□□ 0.2
RNF4-208ENST00000507247 RNF146Q9NTX7 359 aa16.31■□□□□ 0.2
RNF4-208ENST00000507247 PNMA2Q9UL42 364 aa16.31■□□□□ 0.2
RNF4-208ENST00000507247 ZDHHC9Q9Y397 364 aa16.31■□□□□ 0.2
RNF4-208ENST00000507247 MRPL11Q9Y3B7 192 aaKnown RBP16.31■□□□□ 0.2
RNF4-208ENST00000507247 ZNFX1Q9P2E3 1918 aaKnown RBP16.31■□□□□ 0.2
RNF4-208ENST00000507247 KIF28PB7ZC32 967 aa16.3■□□□□ 0.2
RNF4-208ENST00000507247 ALDH1A1P00352 501 aa16.3■□□□□ 0.2
RNF4-208ENST00000507247 ADCY7P51828 1080 aa16.3■□□□□ 0.2
RNF4-208ENST00000507247 FAM110CQ1W6H9 321 aa16.3■□□□□ 0.2
RNF4-208ENST00000507247 TKFCQ3LXA3 575 aa16.3■□□□□ 0.2
RNF4-208ENST00000507247 C17orf99Q6UX52 265 aa16.3■□□□□ 0.2
RNF4-208ENST00000507247 DAGLBQ8NCG7 672 aa16.3■□□□□ 0.2
RNF4-208ENST00000507247 GPRC5AQ8NFJ5 357 aa16.3■□□□□ 0.2
RNF4-208ENST00000507247 RIC8AQ9NPQ8 531 aa16.3■□□□□ 0.2
RNF4-208ENST00000507247 PCDHA4Q9UN74 947 aa16.3■□□□□ 0.2
RNF4-208ENST00000507247 MGAMO43451 1857 aa16.3■□□□□ 0.2
RNF4-208ENST00000507247 ZSWIM8A7E2V4 1837 aa16.3■□□□□ 0.2
RNF4-208ENST00000507247 M0R2N6 131 aa16.29■□□□□ 0.2
RNF4-208ENST00000507247 MEIS2O14770 477 aa16.29■□□□□ 0.2
RNF4-208ENST00000507247 BRD1O95696 1058 aa16.29■□□□□ 0.2
RNF4-208ENST00000507247 ERCC3P19447 782 aa16.29■□□□□ 0.2
RNF4-208ENST00000507247 KRT2P35908 639 aa16.29■□□□□ 0.2
RNF4-208ENST00000507247 LBX1P52954 281 aa16.29■□□□□ 0.2
RNF4-208ENST00000507247 NR5A1Q13285 461 aa16.29■□□□□ 0.2
RNF4-208ENST00000507247 UBE2SQ16763 222 aa16.29■□□□□ 0.2
RNF4-208ENST00000507247 FOXD4L5Q5VV16 416 aaPredicted RBP16.29■□□□□ 0.2
RNF4-208ENST00000507247 NCAPG2Q86XI2 1143 aa16.29■□□□□ 0.2
RNF4-208ENST00000507247 DIS3L2Q8IYB7 885 aaKnown RBP16.29■□□□□ 0.2
RNF4-208ENST00000507247 BLIDQ8IZY5 108 aa16.29■□□□□ 0.2
RNF4-208ENST00000507247 RASGRP4Q8TDF6 673 aa16.29■□□□□ 0.2
RNF4-208ENST00000507247 FOXD4L4Q8WXT5 416 aaPredicted RBP16.29■□□□□ 0.2
RNF4-208ENST00000507247 CUL5Q93034 780 aa16.29■□□□□ 0.2
RNF4-208ENST00000507247 PORCNQ9H237 461 aa16.29■□□□□ 0.2
RNF4-208ENST00000507247 PSTPIP2Q9H939 334 aa16.29■□□□□ 0.2
RNF4-208ENST00000507247 C6orf50Q9HD87 102 aa16.29■□□□□ 0.2
RNF4-208ENST00000507247 CIZ1Q9ULV3 898 aaPredicted RBP16.29■□□□□ 0.2
RNF4-208ENST00000507247 MYH7BA7E2Y1 1941 aa16.28■□□□□ 0.2
RNF4-208ENST00000507247 BTBD18B2RXH4 712 aa16.28■□□□□ 0.2
RNF4-208ENST00000507247 SLC25A27O95847 323 aa16.28■□□□□ 0.2
RNF4-208ENST00000507247 ZSCAN22P10073 491 aaPredicted RBP16.28■□□□□ 0.2
RNF4-208ENST00000507247 HSPA8P11142 646 aaKnown RBP16.28■□□□□ 0.2
RNF4-208ENST00000507247 CALML3P27482 149 aa16.28■□□□□ 0.2
RNF4-208ENST00000507247 GNA11P29992 359 aa16.28■□□□□ 0.2
RNF4-208ENST00000507247 CTCFP49711 727 aaPredicted RBP16.28■□□□□ 0.2
RNF4-208ENST00000507247 CLK2P49760 499 aaKnown RBP16.28■□□□□ 0.2
RNF4-208ENST00000507247 NOM1Q5C9Z4 860 aaKnown RBP16.28■□□□□ 0.2
RNF4-208ENST00000507247 MCTP1Q6DN14 999 aa16.28■□□□□ 0.2
RNF4-208ENST00000507247 GALNT17Q6IS24 598 aa16.28■□□□□ 0.2
RNF4-208ENST00000507247 USP17L6PQ6QN14 398 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms