RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 RIOK1Q9BRS2 568 aaKnown RBP11.41□□□□□ -0.58
CLCN3-205ENST00000506924 FSD1Q9BTV5 496 aa11.41□□□□□ -0.58
CLCN3-205ENST00000506924 STAP2Q9UGK3 403 aa11.41□□□□□ -0.58
CLCN3-205ENST00000506924 PALD1Q9ULE6 856 aa11.41□□□□□ -0.58
CLCN3-205ENST00000506924 MYH7P12883 1935 aa11.41□□□□□ -0.58
CLCN3-205ENST00000506924 FLT1P17948 1338 aa11.4□□□□□ -0.58
CLCN3-205ENST00000506924 OTOFQ9HC10 1997 aa11.4□□□□□ -0.58
CLCN3-205ENST00000506924 PRKAB2O43741 272 aa11.4□□□□□ -0.58
CLCN3-205ENST00000506924 MBD4O95243 580 aa11.4□□□□□ -0.58
CLCN3-205ENST00000506924 NEFLP07196 543 aa11.4□□□□□ -0.58
CLCN3-205ENST00000506924 INPP5BP32019 993 aa11.4□□□□□ -0.58
CLCN3-205ENST00000506924 KIF23Q02241 960 aaPredicted RBP11.4□□□□□ -0.58
CLCN3-205ENST00000506924 VGLL4Q14135 290 aa11.4□□□□□ -0.58
CLCN3-205ENST00000506924 MAP3K11Q16584 847 aa11.4□□□□□ -0.58
CLCN3-205ENST00000506924 C11orf91Q3C1V1 193 aa11.4□□□□□ -0.58
CLCN3-205ENST00000506924 ARSJQ5FYB0 599 aaPredicted RBP11.4□□□□□ -0.58
CLCN3-205ENST00000506924 DCAF15Q66K64 600 aa11.4□□□□□ -0.58
CLCN3-205ENST00000506924 FIGNL1Q6PIW4 674 aa11.4□□□□□ -0.58
CLCN3-205ENST00000506924 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.4□□□□□ -0.58
CLCN3-205ENST00000506924 ANKRD13AQ8IZ07 590 aa11.4□□□□□ -0.58
CLCN3-205ENST00000506924 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.4□□□□□ -0.58
CLCN3-205ENST00000506924 SDR42E1Q8WUS8 393 aa11.4□□□□□ -0.58
CLCN3-205ENST00000506924 MKNK1Q9BUB5 465 aa11.4□□□□□ -0.58
CLCN3-205ENST00000506924 ZNF341Q9BYN7 854 aa11.4□□□□□ -0.58
CLCN3-205ENST00000506924 PUS7LQ9H0K6 701 aaKnown RBP11.4□□□□□ -0.58
CLCN3-205ENST00000506924 PCNTO95613 3336 aa11.4□□□□□ -0.59
CLCN3-205ENST00000506924 RPAP1Q9BWH6 1393 aaPredicted RBP11.4□□□□□ -0.59
CLCN3-205ENST00000506924 A0A1W2PNR3 127 aa11.39□□□□□ -0.59
CLCN3-205ENST00000506924 RNF113AO15541 343 aaKnown RBP11.39□□□□□ -0.59
CLCN3-205ENST00000506924 HSPA1AP0DMV8 641 aaKnown RBP11.39□□□□□ -0.59
CLCN3-205ENST00000506924 HSPA1BP0DMV9 641 aaKnown RBP11.39□□□□□ -0.59
CLCN3-205ENST00000506924 COX20Q5RI15 118 aa11.39□□□□□ -0.59
CLCN3-205ENST00000506924 ZSCAN25Q6NSZ9 544 aa11.39□□□□□ -0.59
CLCN3-205ENST00000506924 SKAP1Q86WV1 359 aa11.39□□□□□ -0.59
CLCN3-205ENST00000506924 HELQQ8TDG4 1101 aa11.39□□□□□ -0.59
CLCN3-205ENST00000506924 RILPL2Q969X0 211 aa11.39□□□□□ -0.59
CLCN3-205ENST00000506924 HOOK2Q96ED9 719 aa11.39□□□□□ -0.59
CLCN3-205ENST00000506924 NUCKS1Q9H1E3 243 aaKnown RBP11.39□□□□□ -0.59
CLCN3-205ENST00000506924 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.39□□□□□ -0.59
CLCN3-205ENST00000506924 GPAMQ9HCL2 828 aa11.39□□□□□ -0.59
CLCN3-205ENST00000506924 CSADQ9Y600 493 aa11.39□□□□□ -0.59
CLCN3-205ENST00000506924 FOCADQ5VW36 1801 aa11.38□□□□□ -0.59
CLCN3-205ENST00000506924 M0R2C6 588 aa11.38□□□□□ -0.59
CLCN3-205ENST00000506924 IGSF3O75054 1194 aa11.38□□□□□ -0.59
CLCN3-205ENST00000506924 NOGQ13253 232 aa11.38□□□□□ -0.59
CLCN3-205ENST00000506924 UBE3CQ15386 1083 aa11.38□□□□□ -0.59
CLCN3-205ENST00000506924 RIPOR1Q6ZS17 1223 aa11.38□□□□□ -0.59
CLCN3-205ENST00000506924 OSBP2Q969R2 916 aa11.38□□□□□ -0.59
CLCN3-205ENST00000506924 OPTNQ96CV9 577 aa11.38□□□□□ -0.59
CLCN3-205ENST00000506924 WNK4Q96J92 1243 aa11.38□□□□□ -0.59
CLCN3-205ENST00000506924 SEC62Q99442 399 aaKnown RBP11.38□□□□□ -0.59
CLCN3-205ENST00000506924 CRNKL1Q9BZJ0 848 aaKnown RBP11.38□□□□□ -0.59
CLCN3-205ENST00000506924 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.38□□□□□ -0.59
CLCN3-205ENST00000506924 SNCAIPQ9Y6H5 919 aa11.38□□□□□ -0.59
CLCN3-205ENST00000506924 ATRNL1Q5VV63 1379 aa11.38□□□□□ -0.59
CLCN3-205ENST00000506924 MYH1P12882 1939 aa11.37□□□□□ -0.59
CLCN3-205ENST00000506924 PHF20L1A8MW92 1017 aa11.37□□□□□ -0.59
CLCN3-205ENST00000506924 H3BM21 787 aa11.37□□□□□ -0.59
CLCN3-205ENST00000506924 TGFBR3LH3BV60 316 aa11.37□□□□□ -0.59
CLCN3-205ENST00000506924 VSIG8P0DPA2 414 aa11.37□□□□□ -0.59
CLCN3-205ENST00000506924 CYP2D6P10635 497 aa11.37□□□□□ -0.59
CLCN3-205ENST00000506924 MAP2K2P36507 400 aa11.37□□□□□ -0.59
CLCN3-205ENST00000506924 APPBP2Q92624 585 aa11.37□□□□□ -0.59
CLCN3-205ENST00000506924 RUBCNLQ9H714 662 aa11.37□□□□□ -0.59
CLCN3-205ENST00000506924 NEUROD4Q9HD90 331 aa11.37□□□□□ -0.59
CLCN3-205ENST00000506924 MCM9Q9NXL9 1143 aa11.37□□□□□ -0.59
CLCN3-205ENST00000506924 SEPT3Q9UH03 358 aa11.37□□□□□ -0.59
CLCN3-205ENST00000506924 LRFN2Q9ULH4 789 aa11.37□□□□□ -0.59
CLCN3-205ENST00000506924 SLC4A4Q9Y6R1 1079 aa11.37□□□□□ -0.59
CLCN3-205ENST00000506924 CYP2D7A0A087X1C5 515 aa11.36□□□□□ -0.59
CLCN3-205ENST00000506924 SMIM22K7EJ46 135 aa11.36□□□□□ -0.59
CLCN3-205ENST00000506924 FOXN1O15353 648 aa11.36□□□□□ -0.59
CLCN3-205ENST00000506924 POLR3DP05423 398 aaPredicted RBP11.36□□□□□ -0.59
CLCN3-205ENST00000506924 BRD2P25440 801 aaKnown RBP11.36□□□□□ -0.59
CLCN3-205ENST00000506924 PLCD1P51178 756 aa11.36□□□□□ -0.59
CLCN3-205ENST00000506924 MAP2K1Q02750 393 aaPredicted RBP11.36□□□□□ -0.59
CLCN3-205ENST00000506924 RRP1BQ14684 758 aaKnown RBP11.36□□□□□ -0.59
CLCN3-205ENST00000506924 DBN1Q16643 649 aa11.36□□□□□ -0.59
CLCN3-205ENST00000506924 SHROOM1Q2M3G4 852 aaPredicted RBP11.36□□□□□ -0.59
CLCN3-205ENST00000506924 TMED8Q6PL24 325 aaPredicted RBP11.36□□□□□ -0.59
CLCN3-205ENST00000506924 CCDC129Q6ZRS4 1044 aa11.36□□□□□ -0.59
CLCN3-205ENST00000506924 CAPN12Q6ZSI9 719 aa11.36□□□□□ -0.59
CLCN3-205ENST00000506924 CCDC84Q86UT8 332 aaPredicted RBP11.36□□□□□ -0.59
CLCN3-205ENST00000506924 CERS3Q8IU89 383 aa11.36□□□□□ -0.59
CLCN3-205ENST00000506924 CRACR2BQ8N4Y2 399 aaPredicted RBP11.36□□□□□ -0.59
CLCN3-205ENST00000506924 EVI5LQ96CN4 794 aa11.36□□□□□ -0.59
CLCN3-205ENST00000506924 ZNF837Q96EG3 531 aaPredicted RBP11.36□□□□□ -0.59
CLCN3-205ENST00000506924 CCDC136Q96JN2 1154 aa11.36□□□□□ -0.59
CLCN3-205ENST00000506924 SUSD3Q96L08 255 aa11.36□□□□□ -0.59
CLCN3-205ENST00000506924 STRBPQ96SI9 672 aaKnown RBP11.36□□□□□ -0.59
CLCN3-205ENST00000506924 PI4KBQ9UBF8 816 aa11.36□□□□□ -0.59
CLCN3-205ENST00000506924 ZNF112Q9UJU3 913 aa11.36□□□□□ -0.59
CLCN3-205ENST00000506924 SIPA1L1O43166 1804 aa11.36□□□□□ -0.59
CLCN3-205ENST00000506924 THSD7BQ9C0I4 1608 aa11.35□□□□□ -0.59
CLCN3-205ENST00000506924 TERTO14746 1132 aaKnown RBP11.35□□□□□ -0.59
CLCN3-205ENST00000506924 GPAA1O43292 621 aa11.35□□□□□ -0.59
CLCN3-205ENST00000506924 HLA-DOAP06340 250 aa11.35□□□□□ -0.59
CLCN3-205ENST00000506924 ZFYP08048 801 aaPredicted RBP11.35□□□□□ -0.59
CLCN3-205ENST00000506924 FOXR1Q6PIV2 292 aa11.35□□□□□ -0.59
CLCN3-205ENST00000506924 STK11IPQ8N1F8 1099 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms