RNA–Protein interactions for RNA: ENST00000506734.5

SMN2-206, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 1,550 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-206ENST00000506734 SUPT20HL1Q3ZLR7 823 aa21.02■□□□□ 0.96
SMN2-206ENST00000506734 USP49Q70CQ1 688 aa21.02■□□□□ 0.96
SMN2-206ENST00000506734 ANP32BQ92688 251 aaKnown RBP21.02■□□□□ 0.96
SMN2-206ENST00000506734 SYMPKQ92797 1274 aaKnown RBP21.02■□□□□ 0.96
SMN2-206ENST00000506734 TMEM60Q9H2L4 133 aa21.02■□□□□ 0.96
SMN2-206ENST00000506734 SRCAPQ6ZRS2 3230 aa21.02■□□□□ 0.96
SMN2-206ENST00000506734 POLR2DO15514 142 aaKnown RBP21.02■□□□□ 0.95
SMN2-206ENST00000506734 NEMFO60524 1076 aa21.02■□□□□ 0.95
SMN2-206ENST00000506734 SNAP25P60880 206 aa21.02■□□□□ 0.95
SMN2-206ENST00000506734 AP3B2Q13367 1082 aa21.02■□□□□ 0.95
SMN2-206ENST00000506734 ANO6Q4KMQ2 910 aa21.02■□□□□ 0.95
SMN2-206ENST00000506734 CNNM3Q8NE01 707 aa21.02■□□□□ 0.95
SMN2-206ENST00000506734 EPSTI1Q96J88 318 aa21.02■□□□□ 0.95
SMN2-206ENST00000506734 WRNIP1Q96S55 665 aa21.02■□□□□ 0.95
SMN2-206ENST00000506734 EDIL3O43854 480 aa21.01■□□□□ 0.95
SMN2-206ENST00000506734 OR52Z1P0C646 297 aa21.01■□□□□ 0.95
SMN2-206ENST00000506734 USP14P54578 494 aa21.01■□□□□ 0.95
SMN2-206ENST00000506734 NOL9Q5SY16 702 aaKnown RBP21.01■□□□□ 0.95
SMN2-206ENST00000506734 PRAMEF18Q5VWM3 479 aa21.01■□□□□ 0.95
SMN2-206ENST00000506734 DPY19L2Q6NUT2 758 aa21.01■□□□□ 0.95
SMN2-206ENST00000506734 KANK3Q6NY19 840 aa21.01■□□□□ 0.95
SMN2-206ENST00000506734 DTHD1Q6ZMT9 781 aa21.01■□□□□ 0.95
SMN2-206ENST00000506734 KLRG1Q96E93 195 aa21.01■□□□□ 0.95
SMN2-206ENST00000506734 PYM1Q9BRP8 204 aaKnown RBP21.01■□□□□ 0.95
SMN2-206ENST00000506734 ANO10Q9NW15 660 aa21.01■□□□□ 0.95
SMN2-206ENST00000506734 USP25Q9UHP3 1055 aa21.01■□□□□ 0.95
SMN2-206ENST00000506734 HOOK1Q9UJC3 728 aaKnown RBP21.01■□□□□ 0.95
SMN2-206ENST00000506734 TUBE1Q9UJT0 475 aa21.01■□□□□ 0.95
SMN2-206ENST00000506734 MEIS2O14770 477 aa21■□□□□ 0.95
SMN2-206ENST00000506734 ACTN4O43707 911 aaKnown RBP21■□□□□ 0.95
SMN2-206ENST00000506734 MDM2Q00987 491 aaPredicted RBP21■□□□□ 0.95
SMN2-206ENST00000506734 PPP4R3AQ6IN85 833 aa21■□□□□ 0.95
SMN2-206ENST00000506734 NAP1L4Q99733 375 aaKnown RBP21■□□□□ 0.95
SMN2-206ENST00000506734 AS3MTQ9HBK9 375 aa21■□□□□ 0.95
SMN2-206ENST00000506734 POLR2AP24928 1970 aaKnown RBP21■□□□□ 0.95
SMN2-206ENST00000506734 PTPRAP18433 802 aa20.99■□□□□ 0.95
SMN2-206ENST00000506734 USH1GQ495M9 461 aa20.99■□□□□ 0.95
SMN2-206ENST00000506734 KIFC2Q96AC6 838 aa20.99■□□□□ 0.95
SMN2-206ENST00000506734 PICK1Q9NRD5 415 aa20.99■□□□□ 0.95
SMN2-206ENST00000506734 A0A087X0B3 334 aa20.98■□□□□ 0.95
SMN2-206ENST00000506734 USP17L15C9J2P7 530 aa20.98■□□□□ 0.95
SMN2-206ENST00000506734 USP17L13C9JLJ4 530 aa20.98■□□□□ 0.95
SMN2-206ENST00000506734 USP17L11C9JVI0 530 aa20.98■□□□□ 0.95
SMN2-206ENST00000506734 USP17L18D6R9N7 530 aa20.98■□□□□ 0.95
SMN2-206ENST00000506734 USP17L22D6RA61 530 aa20.98■□□□□ 0.95
SMN2-206ENST00000506734 USP17L17D6RBQ6 530 aa20.98■□□□□ 0.95
SMN2-206ENST00000506734 USP17L19D6RCP7 530 aa20.98■□□□□ 0.95
SMN2-206ENST00000506734 USP17L20D6RJB6 530 aa20.98■□□□□ 0.95
SMN2-206ENST00000506734 PIK3CDO00329 1044 aa20.98■□□□□ 0.95
SMN2-206ENST00000506734 OPLAHO14841 1288 aa20.98■□□□□ 0.95
SMN2-206ENST00000506734 FOSP01100 380 aaPredicted RBP20.98■□□□□ 0.95
SMN2-206ENST00000506734 GCFC2P16383 781 aaKnown RBP20.98■□□□□ 0.95
SMN2-206ENST00000506734 CCDC173Q0VFZ6 552 aa20.98■□□□□ 0.95
SMN2-206ENST00000506734 USP17L24Q0WX57 530 aa20.98■□□□□ 0.95
SMN2-206ENST00000506734 USP17L6PQ6QN14 398 aa20.98■□□□□ 0.95
SMN2-206ENST00000506734 DCPSQ96C86 337 aaKnown RBP20.98■□□□□ 0.95
SMN2-206ENST00000506734 PPP1R9BQ96SB3 815 aa20.98■□□□□ 0.95
SMN2-206ENST00000506734 DNAJC25Q9H1X3 360 aa20.98■□□□□ 0.95
SMN2-206ENST00000506734 SERTAD1Q9UHV2 236 aa20.98■□□□□ 0.95
SMN2-206ENST00000506734 PHIPQ8WWQ0 1821 aa20.98■□□□□ 0.95
SMN2-206ENST00000506734 MYH7BA7E2Y1 1941 aa20.98■□□□□ 0.95
SMN2-206ENST00000506734 SLFN14P0C7P3 912 aa20.97■□□□□ 0.95
SMN2-206ENST00000506734 USP50Q70EL3 339 aaPredicted RBP20.97■□□□□ 0.95
SMN2-206ENST00000506734 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.97■□□□□ 0.95
SMN2-206ENST00000506734 ERCC4Q92889 916 aaPredicted RBP20.97■□□□□ 0.95
SMN2-206ENST00000506734 ZKSCAN4Q969J2 545 aaPredicted RBP20.97■□□□□ 0.95
SMN2-206ENST00000506734 CCDC34Q96HJ3 373 aa20.97■□□□□ 0.95
SMN2-206ENST00000506734 AK8Q96MA6 479 aa20.97■□□□□ 0.95
SMN2-206ENST00000506734 MTMR9Q96QG7 549 aa20.97■□□□□ 0.95
SMN2-206ENST00000506734 ANO3Q9BYT9 981 aa20.97■□□□□ 0.95
SMN2-206ENST00000506734 CBX8Q9HC52 389 aa20.97■□□□□ 0.95
SMN2-206ENST00000506734 TXLNAP40222 546 aa20.97■□□□□ 0.95
SMN2-206ENST00000506734 ZNF165P49910 485 aa20.97■□□□□ 0.95
SMN2-206ENST00000506734 USP11P51784 963 aa20.97■□□□□ 0.95
SMN2-206ENST00000506734 BACE1P56817 501 aa20.97■□□□□ 0.95
SMN2-206ENST00000506734 PNOCQ13519 176 aa20.97■□□□□ 0.95
SMN2-206ENST00000506734 MTMR2Q13614 643 aa20.97■□□□□ 0.95
SMN2-206ENST00000506734 POSTNQ15063 836 aa20.97■□□□□ 0.95
SMN2-206ENST00000506734 MOXD1Q6UVY6 613 aa20.97■□□□□ 0.95
SMN2-206ENST00000506734 SULF1Q8IWU6 871 aa20.97■□□□□ 0.95
SMN2-206ENST00000506734 PDILTQ8N807 584 aa20.97■□□□□ 0.95
SMN2-206ENST00000506734 PRPF38AQ8NAV1 312 aaKnown RBP20.97■□□□□ 0.95
SMN2-206ENST00000506734 ZNF280CQ8ND82 737 aa20.97■□□□□ 0.95
SMN2-206ENST00000506734 CRYGNQ8WXF5 182 aa20.97■□□□□ 0.95
SMN2-206ENST00000506734 SLF1Q9BQI6 1058 aa20.97■□□□□ 0.95
SMN2-206ENST00000506734 EMILIN3Q9NT22 766 aa20.97■□□□□ 0.95
SMN2-206ENST00000506734 FBXO28Q9NVF7 368 aa20.97■□□□□ 0.95
SMN2-206ENST00000506734 GRIN3BO60391 1043 aa20.96■□□□□ 0.95
SMN2-206ENST00000506734 TDP2O95551 362 aa20.96■□□□□ 0.95
SMN2-206ENST00000506734 VCAM1P19320 739 aa20.96■□□□□ 0.95
SMN2-206ENST00000506734 NLRP12P59046 1061 aa20.96■□□□□ 0.95
SMN2-206ENST00000506734 ZRSR1Q15695 479 aaKnown RBP20.96■□□□□ 0.95
SMN2-206ENST00000506734 E2F4Q16254 413 aa20.96■□□□□ 0.95
SMN2-206ENST00000506734 GPR162Q16538 588 aa20.96■□□□□ 0.95
SMN2-206ENST00000506734 SH3RF1Q7Z6J0 888 aa20.96■□□□□ 0.95
SMN2-206ENST00000506734 ZC3H15Q8WU90 426 aaKnown RBP20.96■□□□□ 0.95
SMN2-206ENST00000506734 DHX58Q96C10 678 aa20.96■□□□□ 0.95
SMN2-206ENST00000506734 C12orf42Q96LP6 360 aa20.96■□□□□ 0.95
SMN2-206ENST00000506734 CCSER1Q9C0I3 900 aa20.96■□□□□ 0.95
SMN2-206ENST00000506734 PAPPA2Q9BXP8 1791 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms