RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 CATIPQ7Z7H3 387 aa16.06■□□□□ 0.16
SERF1B-204ENST00000506542 NCAPG2Q86XI2 1143 aa16.06■□□□□ 0.16
SERF1B-204ENST00000506542 CCDC144CPQ8IYA2 1237 aa16.06■□□□□ 0.16
SERF1B-204ENST00000506542 GTF3C2Q8WUA4 911 aaPredicted RBP16.06■□□□□ 0.16
SERF1B-204ENST00000506542 ZNF214Q9UL59 606 aaPredicted RBP16.06■□□□□ 0.16
SERF1B-204ENST00000506542 DDX11L8A8MPP1 907 aa16.05■□□□□ 0.16
SERF1B-204ENST00000506542 CALM1P0DP23 149 aa16.05■□□□□ 0.16
SERF1B-204ENST00000506542 CALM2P0DP24 149 aa16.05■□□□□ 0.16
SERF1B-204ENST00000506542 CALM3P0DP25 149 aa16.05■□□□□ 0.16
SERF1B-204ENST00000506542 TOP1P11387 765 aaKnown RBP16.05■□□□□ 0.16
SERF1B-204ENST00000506542 TROAPQ12815 778 aa16.05■□□□□ 0.16
SERF1B-204ENST00000506542 IKQ13123 557 aaPredicted RBP16.05■□□□□ 0.16
SERF1B-204ENST00000506542 MORN1Q5T089 497 aa16.05■□□□□ 0.16
SERF1B-204ENST00000506542 FANCBQ8NB91 859 aa16.05■□□□□ 0.16
SERF1B-204ENST00000506542 TRIB2Q92519 343 aa16.05■□□□□ 0.16
SERF1B-204ENST00000506542 GMCL1Q96IK5 515 aa16.05■□□□□ 0.16
SERF1B-204ENST00000506542 RAVER2Q9HCJ3 691 aaKnown RBP16.05■□□□□ 0.16
SERF1B-204ENST00000506542 FLRT1Q9NZU1 646 aa16.05■□□□□ 0.16
SERF1B-204ENST00000506542 CCDC196A0A1B0GTZ2 297 aa16.05■□□□□ 0.16
SERF1B-204ENST00000506542 INHAP05111 366 aa16.05■□□□□ 0.16
SERF1B-204ENST00000506542 PRMT2P55345 433 aa16.05■□□□□ 0.16
SERF1B-204ENST00000506542 NUP133Q8WUM0 1156 aa16.05■□□□□ 0.16
SERF1B-204ENST00000506542 USP6NLQ92738 828 aa16.05■□□□□ 0.16
SERF1B-204ENST00000506542 ORC3Q9UBD5 711 aaPredicted RBP16.05■□□□□ 0.16
SERF1B-204ENST00000506542 PDHBP11177 359 aa16.04■□□□□ 0.16
SERF1B-204ENST00000506542 IFNAR1P17181 557 aa16.04■□□□□ 0.16
SERF1B-204ENST00000506542 STAT2P52630 851 aa16.04■□□□□ 0.16
SERF1B-204ENST00000506542 CCNA1P78396 465 aa16.04■□□□□ 0.16
SERF1B-204ENST00000506542 SNRNP48Q6IEG0 339 aaKnown RBP16.04■□□□□ 0.16
SERF1B-204ENST00000506542 PRPF38AQ8NAV1 312 aaKnown RBP16.04■□□□□ 0.16
SERF1B-204ENST00000506542 NPLOC4Q8TAT6 608 aa16.04■□□□□ 0.16
SERF1B-204ENST00000506542 NUDT12Q9BQG2 462 aa16.04■□□□□ 0.16
SERF1B-204ENST00000506542 UNC93B1Q9H1C4 597 aa16.04■□□□□ 0.16
SERF1B-204ENST00000506542 FEM1BQ9UK73 627 aa16.04■□□□□ 0.16
SERF1B-204ENST00000506542 PLXNA1Q9UIW2 1896 aa16.04■□□□□ 0.16
SERF1B-204ENST00000506542 STK36Q9NRP7 1315 aa16.03■□□□□ 0.16
SERF1B-204ENST00000506542 RBBP6Q7Z6E9 1792 aaKnown RBP16.03■□□□□ 0.16
SERF1B-204ENST00000506542 PPFIA3O75145 1194 aa16.03■□□□□ 0.16
SERF1B-204ENST00000506542 PGK2P07205 417 aa16.03■□□□□ 0.16
SERF1B-204ENST00000506542 EN2P19622 333 aaPredicted RBP16.03■□□□□ 0.16
SERF1B-204ENST00000506542 PTPREP23469 700 aa16.03■□□□□ 0.16
SERF1B-204ENST00000506542 STAT3P40763 770 aa16.03■□□□□ 0.16
SERF1B-204ENST00000506542 IRF5Q13568 498 aa16.03■□□□□ 0.16
SERF1B-204ENST00000506542 CCDC174Q6PII3 467 aa16.03■□□□□ 0.16
SERF1B-204ENST00000506542 MB21D1Q8N884 522 aa16.03■□□□□ 0.16
SERF1B-204ENST00000506542 AGBL1Q96MI9 1066 aa16.03■□□□□ 0.16
SERF1B-204ENST00000506542 HOMER2Q9NSB8 354 aa16.03■□□□□ 0.16
SERF1B-204ENST00000506542 PRR12Q9ULL5 1215 aa16.03■□□□□ 0.16
SERF1B-204ENST00000506542 SYNPO2Q9UMS6 1093 aa16.03■□□□□ 0.16
SERF1B-204ENST00000506542 ATP6V1DQ9Y5K8 247 aa16.03■□□□□ 0.16
SERF1B-204ENST00000506542 GOLGA6L22H0YM25 854 aa16.02■□□□□ 0.16
SERF1B-204ENST00000506542 H3BQV1 296 aa16.02■□□□□ 0.16
SERF1B-204ENST00000506542 COBLO75128 1261 aa16.02■□□□□ 0.16
SERF1B-204ENST00000506542 ADORA2AP29274 412 aa16.02■□□□□ 0.16
SERF1B-204ENST00000506542 NBPF11Q86T75 865 aa16.02■□□□□ 0.16
SERF1B-204ENST00000506542 SLAIN1Q8ND83 568 aa16.02■□□□□ 0.16
SERF1B-204ENST00000506542 PNMA1Q8ND90 353 aa16.02■□□□□ 0.16
SERF1B-204ENST00000506542 RGS22Q8NE09 1264 aa16.02■□□□□ 0.16
SERF1B-204ENST00000506542 KAT14Q9H8E8 782 aa16.02■□□□□ 0.16
SERF1B-204ENST00000506542 SLC38A10Q9HBR0 1119 aa16.02■□□□□ 0.16
SERF1B-204ENST00000506542 RBM28Q9NW13 759 aaKnown RBP16.02■□□□□ 0.16
SERF1B-204ENST00000506542 BAZ2BQ9UIF8 2168 aaKnown RBP16.02■□□□□ 0.15
SERF1B-204ENST00000506542 ZNF536O15090 1300 aa16.02■□□□□ 0.15
SERF1B-204ENST00000506542 CCL5P13501 91 aa16.02■□□□□ 0.15
SERF1B-204ENST00000506542 MAP2K5Q13163 448 aa16.02■□□□□ 0.15
SERF1B-204ENST00000506542 GRB14Q14449 540 aa16.02■□□□□ 0.15
SERF1B-204ENST00000506542 RIOX2Q8IUF8 465 aa16.02■□□□□ 0.15
SERF1B-204ENST00000506542 DCAF4Q8WV16 495 aa16.02■□□□□ 0.15
SERF1B-204ENST00000506542 PHKBQ93100 1093 aa16.02■□□□□ 0.15
SERF1B-204ENST00000506542 MAP3K14Q99558 947 aa16.02■□□□□ 0.15
SERF1B-204ENST00000506542 UBA5Q9GZZ9 404 aa16.02■□□□□ 0.15
SERF1B-204ENST00000506542 IVNS1ABPQ9Y6Y0 642 aa16.02■□□□□ 0.15
SERF1B-204ENST00000506542 PTMSP20962 102 aa16.01■□□□□ 0.15
SERF1B-204ENST00000506542 SSRP1Q08945 709 aaKnown RBP16.01■□□□□ 0.15
SERF1B-204ENST00000506542 MCTP1Q6DN14 999 aa16.01■□□□□ 0.15
SERF1B-204ENST00000506542 CTCFLQ8NI51 663 aaPredicted RBP16.01■□□□□ 0.15
SERF1B-204ENST00000506542 SOCS4Q8WXH5 440 aa16.01■□□□□ 0.15
SERF1B-204ENST00000506542 CHAMP1Q96JM3 812 aa16.01■□□□□ 0.15
SERF1B-204ENST00000506542 RNF208Q9H0X6 261 aa16.01■□□□□ 0.15
SERF1B-204ENST00000506542 ZNF236Q9UL36 1845 aa16■□□□□ 0.15
SERF1B-204ENST00000506542 SLC15A5A6NIM6 579 aa16■□□□□ 0.15
SERF1B-204ENST00000506542 ZBED4O75132 1171 aa16■□□□□ 0.15
SERF1B-204ENST00000506542 RGS2P41220 211 aa16■□□□□ 0.15
SERF1B-204ENST00000506542 ZNF543Q08ER8 600 aa16■□□□□ 0.15
SERF1B-204ENST00000506542 PPP4R3BQ5MIZ7 849 aa16■□□□□ 0.15
SERF1B-204ENST00000506542 TRIM22Q8IYM9 498 aa16■□□□□ 0.15
SERF1B-204ENST00000506542 STAG2Q8N3U4 1231 aa16■□□□□ 0.15
SERF1B-204ENST00000506542 PXYLP1Q8TE99 480 aa16■□□□□ 0.15
SERF1B-204ENST00000506542 C8orf76Q96K31 380 aa16■□□□□ 0.15
SERF1B-204ENST00000506542 APBA2Q99767 749 aa16■□□□□ 0.15
SERF1B-204ENST00000506542 SLC26A6Q9BXS9 759 aa16■□□□□ 0.15
SERF1B-204ENST00000506542 TEX13BQ9BXU2 312 aa16■□□□□ 0.15
SERF1B-204ENST00000506542 MCM3APO60318 1980 aa16■□□□□ 0.15
SERF1B-204ENST00000506542 SNHG28P0DPA3 235 aa15.99■□□□□ 0.15
SERF1B-204ENST00000506542 CYP2C19P33261 490 aa15.99■□□□□ 0.15
SERF1B-204ENST00000506542 FOSBP53539 338 aa15.99■□□□□ 0.15
SERF1B-204ENST00000506542 FUT2Q10981 343 aa15.99■□□□□ 0.15
SERF1B-204ENST00000506542 TMTC3Q6ZXV5 915 aa15.99■□□□□ 0.15
SERF1B-204ENST00000506542 FERMT3Q86UX7 667 aa15.99■□□□□ 0.15
SERF1B-204ENST00000506542 SHCBP1Q8NEM2 672 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms