RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 BIN2Q9UBW5 565 aaPredicted RBP8.5□□□□□ -1.05
GYPB-206ENST00000506516 GJD2Q9UKL4 321 aa8.5□□□□□ -1.05
GYPB-206ENST00000506516 PTPRFP10586 1907 aa8.5□□□□□ -1.05
GYPB-206ENST00000506516 MYH8P13535 1937 aa8.5□□□□□ -1.05
GYPB-206ENST00000506516 SLC15A5A6NIM6 579 aa8.49□□□□□ -1.05
GYPB-206ENST00000506516 ATP2A1O14983 1001 aa8.49□□□□□ -1.05
GYPB-206ENST00000506516 HMGB1P09429 215 aaKnown RBP8.49□□□□□ -1.05
GYPB-206ENST00000506516 PARP1P09874 1014 aaKnown RBP8.49□□□□□ -1.05
GYPB-206ENST00000506516 FCER1AP12319 257 aa8.49□□□□□ -1.05
GYPB-206ENST00000506516 XRCC5P13010 732 aaKnown RBP8.49□□□□□ -1.05
GYPB-206ENST00000506516 ERCC3P19447 782 aa8.49□□□□□ -1.05
GYPB-206ENST00000506516 CYP2B6P20813 491 aa8.49□□□□□ -1.05
GYPB-206ENST00000506516 RGS2P41220 211 aa8.49□□□□□ -1.05
GYPB-206ENST00000506516 SLC4A3P48751 1232 aa8.49□□□□□ -1.05
GYPB-206ENST00000506516 SEC23AQ15436 765 aa8.49□□□□□ -1.05
GYPB-206ENST00000506516 ASPRV1Q53RT3 343 aa8.49□□□□□ -1.05
GYPB-206ENST00000506516 TMEM67Q5HYA8 995 aa8.49□□□□□ -1.05
GYPB-206ENST00000506516 IFFO2Q5TF58 517 aa8.49□□□□□ -1.05
GYPB-206ENST00000506516 SNRNP48Q6IEG0 339 aaKnown RBP8.49□□□□□ -1.05
GYPB-206ENST00000506516 BTNL9Q6UXG8 535 aa8.49□□□□□ -1.05
GYPB-206ENST00000506516 STOX1Q6ZVD7 989 aa8.49□□□□□ -1.05
GYPB-206ENST00000506516 CHST3Q7LGC8 479 aa8.49□□□□□ -1.05
GYPB-206ENST00000506516 CATIPQ7Z7H3 387 aa8.49□□□□□ -1.05
GYPB-206ENST00000506516 DPP9Q86TI2 863 aa8.49□□□□□ -1.05
GYPB-206ENST00000506516 METTL3Q86U44 580 aaKnown RBP8.49□□□□□ -1.05
GYPB-206ENST00000506516 RIOX2Q8IUF8 465 aa8.49□□□□□ -1.05
GYPB-206ENST00000506516 MB21D2Q8IYB1 491 aaPredicted RBP8.49□□□□□ -1.05
GYPB-206ENST00000506516 ABRAQ8N0Z2 381 aa8.49□□□□□ -1.05
GYPB-206ENST00000506516 CPXCR1Q8N123 301 aa8.49□□□□□ -1.05
GYPB-206ENST00000506516 NKX2-3Q8TAU0 364 aa8.49□□□□□ -1.05
GYPB-206ENST00000506516 ARMC5Q96C12 935 aa8.49□□□□□ -1.05
GYPB-206ENST00000506516 TMEM87BQ96K49 555 aa8.49□□□□□ -1.05
GYPB-206ENST00000506516 NEK1Q96PY6 1258 aa8.49□□□□□ -1.05
GYPB-206ENST00000506516 TEX13BQ9BXU2 312 aa8.49□□□□□ -1.05
GYPB-206ENST00000506516 GPCPD1Q9NPB8 672 aa8.49□□□□□ -1.05
GYPB-206ENST00000506516 PNMA2Q9UL42 364 aa8.49□□□□□ -1.05
GYPB-206ENST00000506516 ZNF214Q9UL59 606 aaPredicted RBP8.49□□□□□ -1.05
GYPB-206ENST00000506516 PRR12Q9ULL5 1215 aa8.49□□□□□ -1.05
GYPB-206ENST00000506516 ADGRG1Q9Y653 693 aa8.49□□□□□ -1.05
GYPB-206ENST00000506516 FRMPD2Q68DX3 1309 aaPredicted RBP8.49□□□□□ -1.05
GYPB-206ENST00000506516 PRC1O43663 620 aa8.48□□□□□ -1.05
GYPB-206ENST00000506516 SNHG28P0DPA3 235 aa8.48□□□□□ -1.05
GYPB-206ENST00000506516 HSPA4P34932 840 aa8.48□□□□□ -1.05
GYPB-206ENST00000506516 SLC16A2P36021 539 aa8.48□□□□□ -1.05
GYPB-206ENST00000506516 ZNF543Q08ER8 600 aa8.48□□□□□ -1.05
GYPB-206ENST00000506516 GRB14Q14449 540 aa8.48□□□□□ -1.05
GYPB-206ENST00000506516 KCTD2Q14681 263 aa8.48□□□□□ -1.05
GYPB-206ENST00000506516 MORN1Q5T089 497 aa8.48□□□□□ -1.05
GYPB-206ENST00000506516 SYDE2Q5VT97 1194 aa8.48□□□□□ -1.05
GYPB-206ENST00000506516 TTBK2Q6IQ55 1244 aa8.48□□□□□ -1.05
GYPB-206ENST00000506516 SYNE3Q6ZMZ3 975 aa8.48□□□□□ -1.05
GYPB-206ENST00000506516 NFXL1Q6ZNB6 911 aa8.48□□□□□ -1.05
GYPB-206ENST00000506516 DHX32Q7L7V1 743 aaKnown RBP8.48□□□□□ -1.05
GYPB-206ENST00000506516 REPS2Q8NFH8 660 aa8.48□□□□□ -1.05
GYPB-206ENST00000506516 IGDCC4Q8TDY8 1250 aa8.48□□□□□ -1.05
GYPB-206ENST00000506516 SH3TC2Q8TF17 1288 aa8.48□□□□□ -1.05
GYPB-206ENST00000506516 PHOX2BQ99453 314 aa8.48□□□□□ -1.05
GYPB-206ENST00000506516 MMP19Q99542 508 aa8.48□□□□□ -1.05
GYPB-206ENST00000506516 RAVER2Q9HCJ3 691 aaKnown RBP8.48□□□□□ -1.05
GYPB-206ENST00000506516 FBXO40Q9UH90 709 aa8.48□□□□□ -1.05
GYPB-206ENST00000506516 TAF6LQ9Y6J9 622 aa8.48□□□□□ -1.05
GYPB-206ENST00000506516 GREB1LQ9C091 1923 aaPredicted RBP8.48□□□□□ -1.05
GYPB-206ENST00000506516 CCDC69A6NI79 296 aa8.47□□□□□ -1.05
GYPB-206ENST00000506516 GOLGA8HP0CJ92 632 aa8.47□□□□□ -1.05
GYPB-206ENST00000506516 CALM1P0DP23 149 aa8.47□□□□□ -1.05
GYPB-206ENST00000506516 CALM2P0DP24 149 aa8.47□□□□□ -1.05
GYPB-206ENST00000506516 CALM3P0DP25 149 aa8.47□□□□□ -1.05
GYPB-206ENST00000506516 PSMA5P28066 241 aa8.47□□□□□ -1.05
GYPB-206ENST00000506516 ADORA2AP29274 412 aa8.47□□□□□ -1.05
GYPB-206ENST00000506516 LIFRP42702 1097 aa8.47□□□□□ -1.05
GYPB-206ENST00000506516 FGD1P98174 961 aa8.47□□□□□ -1.05
GYPB-206ENST00000506516 TKFCQ3LXA3 575 aa8.47□□□□□ -1.05
GYPB-206ENST00000506516 CCDC174Q6PII3 467 aa8.47□□□□□ -1.05
GYPB-206ENST00000506516 ANKRD35Q8N283 1001 aa8.47□□□□□ -1.05
GYPB-206ENST00000506516 CHST13Q8NET6 341 aa8.47□□□□□ -1.05
GYPB-206ENST00000506516 USP6NLQ92738 828 aa8.47□□□□□ -1.05
GYPB-206ENST00000506516 KCNB2Q92953 911 aa8.47□□□□□ -1.05
GYPB-206ENST00000506516 DDX11Q96FC9 970 aa8.47□□□□□ -1.05
GYPB-206ENST00000506516 ZNF333Q96JL9 665 aa8.47□□□□□ -1.05
GYPB-206ENST00000506516 MAP3K14Q99558 947 aa8.47□□□□□ -1.05
GYPB-206ENST00000506516 USP26Q9BXU7 913 aa8.47□□□□□ -1.05
GYPB-206ENST00000506516 UBA5Q9GZZ9 404 aa8.47□□□□□ -1.05
GYPB-206ENST00000506516 RANBP17Q9H2T7 1088 aaKnown RBP8.47□□□□□ -1.05
GYPB-206ENST00000506516 DAXXQ9UER7 740 aaPredicted RBP8.47□□□□□ -1.05
GYPB-206ENST00000506516 PALM3A6NDB9 673 aaPredicted RBP8.46□□□□□ -1.06
GYPB-206ENST00000506516 KLRF2D3W0D1 207 aa8.46□□□□□ -1.06
GYPB-206ENST00000506516 DHX16O60231 1041 aaKnown RBP8.46□□□□□ -1.06
GYPB-206ENST00000506516 HMGCRP04035 888 aa8.46□□□□□ -1.06
GYPB-206ENST00000506516 ICAM1P05362 532 aa8.46□□□□□ -1.06
GYPB-206ENST00000506516 HOXC6P09630 235 aa8.46□□□□□ -1.06
GYPB-206ENST00000506516 ALAS1P13196 640 aa8.46□□□□□ -1.06
GYPB-206ENST00000506516 ELNP15502 786 aa8.46□□□□□ -1.06
GYPB-206ENST00000506516 CLCN1P35523 988 aa8.46□□□□□ -1.06
GYPB-206ENST00000506516 ANTXR2P58335 489 aa8.46□□□□□ -1.06
GYPB-206ENST00000506516 SNAP25P60880 206 aa8.46□□□□□ -1.06
GYPB-206ENST00000506516 MFSD14CQ5VZR4 134 aa8.46□□□□□ -1.06
GYPB-206ENST00000506516 CTCFLQ8NI51 663 aaPredicted RBP8.46□□□□□ -1.06
GYPB-206ENST00000506516 NUP133Q8WUM0 1156 aa8.46□□□□□ -1.06
GYPB-206ENST00000506516 AGBL1Q96MI9 1066 aa8.46□□□□□ -1.06
GYPB-206ENST00000506516 APBA2Q99767 749 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms