RNA–Protein interactions for RNA: ENST00000506443.5

COPS4-204, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 4

Gene COPS4, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-204ENST00000506443 CYP2C9P11712 490 aa10.78□□□□□ -0.68
COPS4-204ENST00000506443 CDK8P49336 464 aa10.78□□□□□ -0.68
COPS4-204ENST00000506443 GJA9P57773 515 aa10.78□□□□□ -0.68
COPS4-204ENST00000506443 ACVR2BQ13705 512 aa10.78□□□□□ -0.68
COPS4-204ENST00000506443 TTF1Q15361 905 aaPredicted RBP10.78□□□□□ -0.68
COPS4-204ENST00000506443 GNASQ5JWF2 1037 aa10.78□□□□□ -0.68
COPS4-204ENST00000506443 MAMDC4Q6UXC1 1216 aa10.78□□□□□ -0.68
COPS4-204ENST00000506443 DEFB128Q7Z7B8 93 aa10.78□□□□□ -0.68
COPS4-204ENST00000506443 CPXCR1Q8N123 301 aa10.78□□□□□ -0.68
COPS4-204ENST00000506443 GDPD5Q8WTR4 605 aa10.78□□□□□ -0.68
COPS4-204ENST00000506443 ARNTL2Q8WYA1 636 aa10.78□□□□□ -0.68
COPS4-204ENST00000506443 CCDC17Q96LX7 622 aa10.78□□□□□ -0.68
COPS4-204ENST00000506443 AGBL1Q96MI9 1066 aa10.78□□□□□ -0.68
COPS4-204ENST00000506443 PURBQ96QR8 312 aaKnown RBP10.78□□□□□ -0.68
COPS4-204ENST00000506443 RAVER2Q9HCJ3 691 aaKnown RBP10.78□□□□□ -0.68
COPS4-204ENST00000506443 IL1RAPL2Q9NP60 686 aa10.78□□□□□ -0.68
COPS4-204ENST00000506443 PDGFCQ9NRA1 345 aa10.78□□□□□ -0.68
COPS4-204ENST00000506443 HOMER2Q9NSB8 354 aa10.78□□□□□ -0.68
COPS4-204ENST00000506443 WDFY4Q6ZS81 3184 aa10.78□□□□□ -0.68
COPS4-204ENST00000506443 ZNF318Q5VUA4 2279 aa10.78□□□□□ -0.68
COPS4-204ENST00000506443 GOLIM4O00461 696 aa10.77□□□□□ -0.69
COPS4-204ENST00000506443 PYGBP11216 843 aa10.77□□□□□ -0.69
COPS4-204ENST00000506443 ATP2A2P16615 1042 aaKnown RBP10.77□□□□□ -0.69
COPS4-204ENST00000506443 ERC1Q8IUD2 1116 aa10.77□□□□□ -0.69
COPS4-204ENST00000506443 CCDC144CPQ8IYA2 1237 aa10.77□□□□□ -0.69
COPS4-204ENST00000506443 MSL3Q8N5Y2 521 aaKnown RBP10.77□□□□□ -0.69
COPS4-204ENST00000506443 SLC43A3Q8NBI5 491 aa10.77□□□□□ -0.69
COPS4-204ENST00000506443 RHPN1Q8TCX5 695 aa10.77□□□□□ -0.69
COPS4-204ENST00000506443 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.77□□□□□ -0.69
COPS4-204ENST00000506443 DNAJC2Q99543 621 aaKnown RBP10.77□□□□□ -0.69
COPS4-204ENST00000506443 SH2D4AQ9H788 454 aa10.77□□□□□ -0.69
COPS4-204ENST00000506443 KANSL2Q9H9L4 492 aa10.77□□□□□ -0.69
COPS4-204ENST00000506443 ATP8A2Q9NTI2 1148 aa10.77□□□□□ -0.69
COPS4-204ENST00000506443 TRMT13Q9NUP7 481 aaKnown RBP10.77□□□□□ -0.69
COPS4-204ENST00000506443 SLC4A7Q9Y6M7 1214 aa10.77□□□□□ -0.69
COPS4-204ENST00000506443 MROH7Q68CQ1 1323 aa10.77□□□□□ -0.69
COPS4-204ENST00000506443 USP17L12C9JPN9 530 aa10.76□□□□□ -0.69
COPS4-204ENST00000506443 USP17L21D6R901 530 aa10.76□□□□□ -0.69
COPS4-204ENST00000506443 NDUFB10O96000 172 aa10.76□□□□□ -0.69
COPS4-204ENST00000506443 TAP1Q03518 808 aa10.76□□□□□ -0.69
COPS4-204ENST00000506443 GRB10Q13322 594 aa10.76□□□□□ -0.69
COPS4-204ENST00000506443 TCTN1Q2MV58 587 aa10.76□□□□□ -0.69
COPS4-204ENST00000506443 C16orf86Q6ZW13 317 aa10.76□□□□□ -0.69
COPS4-204ENST00000506443 EEPD1Q7L9B9 569 aa10.76□□□□□ -0.69
COPS4-204ENST00000506443 TLK2Q86UE8 772 aa10.76□□□□□ -0.69
COPS4-204ENST00000506443 FBXO16Q8IX29 292 aaPredicted RBP10.76□□□□□ -0.69
COPS4-204ENST00000506443 PHOX2BQ99453 314 aa10.76□□□□□ -0.69
COPS4-204ENST00000506443 SLF1Q9BQI6 1058 aa10.76□□□□□ -0.69
COPS4-204ENST00000506443 TEX13BQ9BXU2 312 aa10.76□□□□□ -0.69
COPS4-204ENST00000506443 PCDHA11Q9Y5I1 949 aa10.76□□□□□ -0.69
COPS4-204ENST00000506443 SIP14410 1827 aa10.75□□□□□ -0.69
COPS4-204ENST00000506443 SOWAHBA6NEL2 793 aa10.75□□□□□ -0.69
COPS4-204ENST00000506443 TLR3O15455 904 aaKnown RBP10.75□□□□□ -0.69
COPS4-204ENST00000506443 SMPD1P17405 629 aa10.75□□□□□ -0.69
COPS4-204ENST00000506443 ADD2P35612 726 aa10.75□□□□□ -0.69
COPS4-204ENST00000506443 SNAP25P60880 206 aa10.75□□□□□ -0.69
COPS4-204ENST00000506443 NKX3-2P78367 333 aa10.75□□□□□ -0.69
COPS4-204ENST00000506443 ITGA7Q13683 1181 aa10.75□□□□□ -0.69
COPS4-204ENST00000506443 ITPRIPQ8IWB1 547 aa10.75□□□□□ -0.69
COPS4-204ENST00000506443 PCSK9Q8NBP7 692 aaKnown RBP10.75□□□□□ -0.69
COPS4-204ENST00000506443 DDX11Q96FC9 970 aa10.75□□□□□ -0.69
COPS4-204ENST00000506443 MTUS1Q9ULD2 1270 aa10.75□□□□□ -0.69
COPS4-204ENST00000506443 GNEQ9Y223 722 aaKnown RBP10.75□□□□□ -0.69
COPS4-204ENST00000506443 TRIP12Q14669 1992 aaPredicted RBP10.75□□□□□ -0.69
COPS4-204ENST00000506443 SCN10AQ9Y5Y9 1956 aa10.75□□□□□ -0.69
COPS4-204ENST00000506443 ZBED9Q6R2W3 1325 aa10.75□□□□□ -0.69
COPS4-204ENST00000506443 CCER2I3L3R5 266 aa10.74□□□□□ -0.69
COPS4-204ENST00000506443 ATP2A1O14983 1001 aa10.74□□□□□ -0.69
COPS4-204ENST00000506443 IL9P15248 144 aa10.74□□□□□ -0.69
COPS4-204ENST00000506443 COPB2P35606 906 aa10.74□□□□□ -0.69
COPS4-204ENST00000506443 MRE11P49959 708 aa10.74□□□□□ -0.69
COPS4-204ENST00000506443 FSCN1Q16658 493 aaKnown RBP10.74□□□□□ -0.69
COPS4-204ENST00000506443 CTR9Q6PD62 1173 aa10.74□□□□□ -0.69
COPS4-204ENST00000506443 CCDC174Q6PII3 467 aa10.74□□□□□ -0.69
COPS4-204ENST00000506443 NOL8Q76FK4 1167 aaKnown RBP10.74□□□□□ -0.69
COPS4-204ENST00000506443 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.74□□□□□ -0.69
COPS4-204ENST00000506443 ZNF467Q7Z7K2 595 aaPredicted RBP10.74□□□□□ -0.69
COPS4-204ENST00000506443 LRRC47Q8N1G4 583 aaKnown RBP10.74□□□□□ -0.69
COPS4-204ENST00000506443 KIFC2Q96AC6 838 aa10.74□□□□□ -0.69
COPS4-204ENST00000506443 F5H6K3 240 aa10.73□□□□□ -0.69
COPS4-204ENST00000506443 GPR37L1O60883 481 aa10.73□□□□□ -0.69
COPS4-204ENST00000506443 RASA1P20936 1047 aa10.73□□□□□ -0.69
COPS4-204ENST00000506443 KLRC3Q07444 240 aa10.73□□□□□ -0.69
COPS4-204ENST00000506443 SIRT2Q8IXJ6 389 aa10.73□□□□□ -0.69
COPS4-204ENST00000506443 FTSJ3Q8IY81 847 aaKnown RBP10.73□□□□□ -0.69
COPS4-204ENST00000506443 PRPF38AQ8NAV1 312 aaKnown RBP10.73□□□□□ -0.69
COPS4-204ENST00000506443 ALDH8A1Q9H2A2 487 aaPredicted RBP10.73□□□□□ -0.69
COPS4-204ENST00000506443 ABHD16BQ9H3Z7 469 aa10.73□□□□□ -0.69
COPS4-204ENST00000506443 GOPCQ9HD26 462 aa10.73□□□□□ -0.69
COPS4-204ENST00000506443 A1CFQ9NQ94 594 aaKnown RBP10.73□□□□□ -0.69
COPS4-204ENST00000506443 PAG1Q9NWQ8 432 aa10.73□□□□□ -0.69
COPS4-204ENST00000506443 DYNC1LI2O43237 492 aaPredicted RBP10.72□□□□□ -0.69
COPS4-204ENST00000506443 PRDM1O75626 825 aa10.72□□□□□ -0.69
COPS4-204ENST00000506443 ATP5JP18859 108 aa10.72□□□□□ -0.69
COPS4-204ENST00000506443 DEFB103AP81534 67 aa10.72□□□□□ -0.69
COPS4-204ENST00000506443 TNFAIP2Q03169 654 aa10.72□□□□□ -0.69
COPS4-204ENST00000506443 UBE3CQ15386 1083 aa10.72□□□□□ -0.69
COPS4-204ENST00000506443 HSP90AB4PQ58FF6 505 aa10.72□□□□□ -0.69
COPS4-204ENST00000506443 TMEM67Q5HYA8 995 aa10.72□□□□□ -0.69
COPS4-204ENST00000506443 ANKRD35Q8N283 1001 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms