RNA–Protein interactions for RNA: ENST00000506400.1

TRIM23-205, Transcript of tripartite motif containing 23, humanhuman

TSL 4

Gene TRIM23, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-205ENST00000506400 GJB2P29033 226 aa12.91□□□□□ -0.34
TRIM23-205ENST00000506400 SLC4A3P48751 1232 aa12.91□□□□□ -0.34
TRIM23-205ENST00000506400 Q3C1V9 767 aa12.91□□□□□ -0.34
TRIM23-205ENST00000506400 USH1GQ495M9 461 aa12.91□□□□□ -0.34
TRIM23-205ENST00000506400 NOM1Q5C9Z4 860 aaKnown RBP12.91□□□□□ -0.34
TRIM23-205ENST00000506400 WWC2Q6AWC2 1192 aa12.91□□□□□ -0.34
TRIM23-205ENST00000506400 HEATR3Q7Z4Q2 680 aa12.91□□□□□ -0.34
TRIM23-205ENST00000506400 TEX2Q8IWB9 1127 aa12.91□□□□□ -0.34
TRIM23-205ENST00000506400 CCAR1Q8IX12 1150 aaKnown RBP12.91□□□□□ -0.34
TRIM23-205ENST00000506400 CHST13Q8NET6 341 aa12.91□□□□□ -0.34
TRIM23-205ENST00000506400 CCDC148Q8NFR7 591 aa12.91□□□□□ -0.34
TRIM23-205ENST00000506400 COA7Q96BR5 231 aa12.91□□□□□ -0.34
TRIM23-205ENST00000506400 MROH8Q9H579 483 aa12.91□□□□□ -0.34
TRIM23-205ENST00000506400 RLFQ13129 1914 aa12.9□□□□□ -0.34
TRIM23-205ENST00000506400 MAPK4P31152 587 aa12.9□□□□□ -0.34
TRIM23-205ENST00000506400 NAPAP54920 295 aa12.9□□□□□ -0.34
TRIM23-205ENST00000506400 TRIM29Q14134 588 aa12.9□□□□□ -0.34
TRIM23-205ENST00000506400 NCAPG2Q86XI2 1143 aa12.9□□□□□ -0.34
TRIM23-205ENST00000506400 MCF2L2Q86YR7 1114 aa12.9□□□□□ -0.34
TRIM23-205ENST00000506400 SAMD3Q8N6K7 520 aa12.9□□□□□ -0.34
TRIM23-205ENST00000506400 JMYQ8N9B5 988 aa12.9□□□□□ -0.34
TRIM23-205ENST00000506400 GPKOWQ92917 476 aaPredicted RBP eCLIP12.9□□□□□ -0.34
TRIM23-205ENST00000506400 TRERF1Q96PN7 1200 aa12.9□□□□□ -0.34
TRIM23-205ENST00000506400 GLT8D2Q9H1C3 349 aa12.9□□□□□ -0.34
TRIM23-205ENST00000506400 CWC22Q9HCG8 908 aaKnown RBP12.9□□□□□ -0.34
TRIM23-205ENST00000506400 RNF146Q9NTX7 359 aa12.9□□□□□ -0.34
TRIM23-205ENST00000506400 WBP1LQ9NX94 342 aa12.9□□□□□ -0.34
TRIM23-205ENST00000506400 RIPK3Q9Y572 518 aa12.9□□□□□ -0.34
TRIM23-205ENST00000506400 PARP14Q460N5 1801 aa12.9□□□□□ -0.34
TRIM23-205ENST00000506400 ESYT2A0FGR8 921 aa12.89□□□□□ -0.35
TRIM23-205ENST00000506400 STXBP3O00186 592 aa12.89□□□□□ -0.35
TRIM23-205ENST00000506400 PEX10O60683 326 aa12.89□□□□□ -0.35
TRIM23-205ENST00000506400 ERCC3P19447 782 aa12.89□□□□□ -0.35
TRIM23-205ENST00000506400 PDCP20941 246 aa12.89□□□□□ -0.35
TRIM23-205ENST00000506400 SP3Q02447 781 aa12.89□□□□□ -0.35
TRIM23-205ENST00000506400 KIF22Q14807 665 aa12.89□□□□□ -0.35
TRIM23-205ENST00000506400 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.89□□□□□ -0.35
TRIM23-205ENST00000506400 RGS22Q8NE09 1264 aa12.89□□□□□ -0.35
TRIM23-205ENST00000506400 C8orf76Q96K31 380 aa12.89□□□□□ -0.35
TRIM23-205ENST00000506400 ACAD9Q9H845 621 aa12.89□□□□□ -0.35
TRIM23-205ENST00000506400 C6orf50Q9HD87 102 aa12.89□□□□□ -0.35
TRIM23-205ENST00000506400 MAP3K20Q9NYL2 800 aaKnown RBP12.89□□□□□ -0.35
TRIM23-205ENST00000506400 VPS54Q9P1Q0 977 aa12.89□□□□□ -0.35
TRIM23-205ENST00000506400 SMCO2A6NFE2 343 aa12.88□□□□□ -0.35
TRIM23-205ENST00000506400 GPR25O00155 361 aa12.88□□□□□ -0.35
TRIM23-205ENST00000506400 STRNO43815 780 aa12.88□□□□□ -0.35
TRIM23-205ENST00000506400 DTNBO60941 627 aa12.88□□□□□ -0.35
TRIM23-205ENST00000506400 PDIA4P13667 645 aaKnown RBP12.88□□□□□ -0.35
TRIM23-205ENST00000506400 CALML3P27482 149 aa12.88□□□□□ -0.35
TRIM23-205ENST00000506400 GNA11P29992 359 aa12.88□□□□□ -0.35
TRIM23-205ENST00000506400 MRPL12P52815 198 aaKnown RBP12.88□□□□□ -0.35
TRIM23-205ENST00000506400 NLRP5P59047 1200 aa12.88□□□□□ -0.35
TRIM23-205ENST00000506400 WDR78Q5VTH9 848 aa12.88□□□□□ -0.35
TRIM23-205ENST00000506400 GALNT17Q6IS24 598 aa12.88□□□□□ -0.35
TRIM23-205ENST00000506400 BICD2Q8TD16 824 aa12.88□□□□□ -0.35
TRIM23-205ENST00000506400 CLEC4DQ8WXI8 215 aa12.88□□□□□ -0.35
TRIM23-205ENST00000506400 PORCNQ9H237 461 aa12.88□□□□□ -0.35
TRIM23-205ENST00000506400 R3HDMLQ9H3Y0 253 aa12.88□□□□□ -0.35
TRIM23-205ENST00000506400 EFCC1Q9HA90 598 aa12.88□□□□□ -0.35
TRIM23-205ENST00000506400 FOXD4L1Q9NU39 408 aa12.88□□□□□ -0.35
TRIM23-205ENST00000506400 IVNS1ABPQ9Y6Y0 642 aa12.88□□□□□ -0.35
TRIM23-205ENST00000506400 GCOM1H8Y6P7 765 aaPredicted RBP12.87□□□□□ -0.35
TRIM23-205ENST00000506400 POLR2MP0CAP2 368 aa12.87□□□□□ -0.35
TRIM23-205ENST00000506400 FCER1AP12319 257 aa12.87□□□□□ -0.35
TRIM23-205ENST00000506400 ADCY7P51828 1080 aa12.87□□□□□ -0.35
TRIM23-205ENST00000506400 KCTD2Q14681 263 aa12.87□□□□□ -0.35
TRIM23-205ENST00000506400 ARHGEF6Q15052 776 aa12.87□□□□□ -0.35
TRIM23-205ENST00000506400 MUM1L1Q5H9M0 696 aa12.87□□□□□ -0.35
TRIM23-205ENST00000506400 LARP1BQ659C4 914 aaKnown RBP12.87□□□□□ -0.35
TRIM23-205ENST00000506400 MCTP2Q6DN12 878 aa12.87□□□□□ -0.35
TRIM23-205ENST00000506400 TYW1BQ6NUM6 668 aa12.87□□□□□ -0.35
TRIM23-205ENST00000506400 PLEKHH3Q7Z736 793 aa12.87□□□□□ -0.35
TRIM23-205ENST00000506400 ABRAQ8N0Z2 381 aa12.87□□□□□ -0.35
TRIM23-205ENST00000506400 CUL5Q93034 780 aa12.87□□□□□ -0.35
TRIM23-205ENST00000506400 AIFM3Q96NN9 605 aa12.87□□□□□ -0.35
TRIM23-205ENST00000506400 MMP19Q99542 508 aa12.87□□□□□ -0.35
TRIM23-205ENST00000506400 ZMYND12Q9H0C1 365 aa12.87□□□□□ -0.35
TRIM23-205ENST00000506400 PSTPIP2Q9H939 334 aa12.87□□□□□ -0.35
TRIM23-205ENST00000506400 BRMS1Q9HCU9 246 aa12.87□□□□□ -0.35
TRIM23-205ENST00000506400 RIC8AQ9NPQ8 531 aa12.87□□□□□ -0.35
TRIM23-205ENST00000506400 HOMER2Q9NSB8 354 aa12.87□□□□□ -0.35
TRIM23-205ENST00000506400 PFASO15067 1338 aa12.87□□□□□ -0.35
TRIM23-205ENST00000506400 PIK3CDO00329 1044 aa12.86□□□□□ -0.35
TRIM23-205ENST00000506400 NFIBO00712 420 aa12.86□□□□□ -0.35
TRIM23-205ENST00000506400 FKTNO75072 461 aa12.86□□□□□ -0.35
TRIM23-205ENST00000506400 CFBP00751 764 aa12.86□□□□□ -0.35
TRIM23-205ENST00000506400 TAL1P17542 331 aaPredicted RBP12.86□□□□□ -0.35
TRIM23-205ENST00000506400 PTPREP23469 700 aa12.86□□□□□ -0.35
TRIM23-205ENST00000506400 FCGRTP55899 365 aa12.86□□□□□ -0.35
TRIM23-205ENST00000506400 LACTBP83111 547 aaPredicted RBP12.86□□□□□ -0.35
TRIM23-205ENST00000506400 GHRHRQ02643 423 aa12.86□□□□□ -0.35
TRIM23-205ENST00000506400 SAFBQ15424 915 aaKnown RBP eCLIP12.86□□□□□ -0.35
TRIM23-205ENST00000506400 KRT40Q6A162 431 aa12.86□□□□□ -0.35
TRIM23-205ENST00000506400 RNF207Q6ZRF8 634 aa12.86□□□□□ -0.35
TRIM23-205ENST00000506400 GPR142Q7Z601 462 aa12.86□□□□□ -0.35
TRIM23-205ENST00000506400 ANKRD35Q8N283 1001 aa12.86□□□□□ -0.35
TRIM23-205ENST00000506400 SPRYD3Q8NCJ5 442 aa12.86□□□□□ -0.35
TRIM23-205ENST00000506400 FBXO18Q8NFZ0 1043 aa12.86□□□□□ -0.35
TRIM23-205ENST00000506400 ERO1AQ96HE7 468 aa12.86□□□□□ -0.35
TRIM23-205ENST00000506400 PHF20Q9BVI0 1012 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms