RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 BTDP43251 543 aa4.24□□□□□ -1.73
TCOF1-208ENST00000506063 CNGB1Q14028 1251 aaPredicted RBP4.24□□□□□ -1.73
TCOF1-208ENST00000506063 ZYXQ15942 572 aaKnown RBP4.24□□□□□ -1.73
TCOF1-208ENST00000506063 CCDC144BQ3MJ40 725 aa4.24□□□□□ -1.73
TCOF1-208ENST00000506063 LRRC24Q50LG9 513 aa4.24□□□□□ -1.73
TCOF1-208ENST00000506063 CAVIN4Q5BKX8 364 aa4.24□□□□□ -1.73
TCOF1-208ENST00000506063 KIAA1755Q5JYT7 1200 aa4.24□□□□□ -1.73
TCOF1-208ENST00000506063 DTWD2Q8NBA8 298 aa4.24□□□□□ -1.73
TCOF1-208ENST00000506063 KREMEN2Q8NCW0 462 aa4.24□□□□□ -1.73
TCOF1-208ENST00000506063 KCNG4Q8TDN1 519 aa4.24□□□□□ -1.73
TCOF1-208ENST00000506063 ACER1Q8TDN7 264 aa4.24□□□□□ -1.73
TCOF1-208ENST00000506063 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.24□□□□□ -1.73
TCOF1-208ENST00000506063 VTI1AQ96AJ9 217 aa4.24□□□□□ -1.73
TCOF1-208ENST00000506063 HNRNPABQ99729 332 aaKnown RBP4.24□□□□□ -1.73
TCOF1-208ENST00000506063 KIAA1683Q9H0B3 1180 aa4.24□□□□□ -1.73
TCOF1-208ENST00000506063 RPAP3Q9H6T3 665 aaPredicted RBP4.24□□□□□ -1.73
TCOF1-208ENST00000506063 INCENPQ9NQS7 918 aa4.24□□□□□ -1.73
TCOF1-208ENST00000506063 MBIPQ9NS73 344 aa4.24□□□□□ -1.73
TCOF1-208ENST00000506063 GINM1Q9NU53 330 aa4.24□□□□□ -1.73
TCOF1-208ENST00000506063 SLC5A4Q9NY91 659 aa4.24□□□□□ -1.73
TCOF1-208ENST00000506063 ANGPTL2Q9UKU9 493 aa4.24□□□□□ -1.73
TCOF1-208ENST00000506063 GNEQ9Y223 722 aaKnown RBP4.24□□□□□ -1.73
TCOF1-208ENST00000506063 MROH7-TTC4A0A0A0MT08 1334 aa4.23□□□□□ -1.73
TCOF1-208ENST00000506063 MIA3Q5JRA6 1907 aa4.23□□□□□ -1.73
TCOF1-208ENST00000506063 SRRM3A6NNA2 597 aaPredicted RBP4.23□□□□□ -1.73
TCOF1-208ENST00000506063 GRM6O15303 877 aa4.23□□□□□ -1.73
TCOF1-208ENST00000506063 KALRNO60229 2985 aa4.23□□□□□ -1.73
TCOF1-208ENST00000506063 NBNO60934 754 aa4.23□□□□□ -1.73
TCOF1-208ENST00000506063 CABYRO75952 493 aa4.23□□□□□ -1.73
TCOF1-208ENST00000506063 CXCL10P02778 98 aa4.23□□□□□ -1.73
TCOF1-208ENST00000506063 FCER1AP12319 257 aa4.23□□□□□ -1.73
TCOF1-208ENST00000506063 ATF7P17544 494 aaPredicted RBP4.23□□□□□ -1.73
TCOF1-208ENST00000506063 SDHBP21912 280 aa4.23□□□□□ -1.73
TCOF1-208ENST00000506063 GUCY1A2P33402 732 aa4.23□□□□□ -1.73
TCOF1-208ENST00000506063 NEXNQ0ZGT2 675 aa4.23□□□□□ -1.73
TCOF1-208ENST00000506063 GPM6BQ13491 265 aa4.23□□□□□ -1.73
TCOF1-208ENST00000506063 ACVR2BQ13705 512 aa4.23□□□□□ -1.73
TCOF1-208ENST00000506063 TMEM132BQ14DG7 1078 aa4.23□□□□□ -1.73
TCOF1-208ENST00000506063 CCDC57Q2TAC2 916 aa4.23□□□□□ -1.73
TCOF1-208ENST00000506063 PRR23BQ6ZRT6 265 aa4.23□□□□□ -1.73
TCOF1-208ENST00000506063 NCAPG2Q86XI2 1143 aa4.23□□□□□ -1.73
TCOF1-208ENST00000506063 MSL3Q8N5Y2 521 aaKnown RBP4.23□□□□□ -1.73
TCOF1-208ENST00000506063 C8orf58Q8NAV2 365 aa4.23□□□□□ -1.73
TCOF1-208ENST00000506063 ADAM32Q8TC27 787 aa4.23□□□□□ -1.73
TCOF1-208ENST00000506063 RPGRIP1Q96KN7 1286 aa4.23□□□□□ -1.73
TCOF1-208ENST00000506063 BBC3Q96PG8 261 aaPredicted RBP4.23□□□□□ -1.73
TCOF1-208ENST00000506063 SEZ6LQ9BYH1 1024 aa4.23□□□□□ -1.73
TCOF1-208ENST00000506063 PARD6AQ9NPB6 346 aa4.23□□□□□ -1.73
TCOF1-208ENST00000506063 CACNA2D2Q9NY47 1150 aa4.23□□□□□ -1.73
TCOF1-208ENST00000506063 ZHX1Q9UKY1 873 aaPredicted RBP4.23□□□□□ -1.73
TCOF1-208ENST00000506063 CDV3Q9UKY7 258 aaKnown RBP4.23□□□□□ -1.73
TCOF1-208ENST00000506063 ADAMTS5Q9UNA0 930 aa4.23□□□□□ -1.73
TCOF1-208ENST00000506063 LHX6Q9UPM6 363 aa4.23□□□□□ -1.73
TCOF1-208ENST00000506063 CNPY2Q9Y2B0 182 aa4.23□□□□□ -1.73
TCOF1-208ENST00000506063 CHMP3Q9Y3E7 222 aa4.23□□□□□ -1.73
TCOF1-208ENST00000506063 COL12A1Q99715 3063 aa4.23□□□□□ -1.73
TCOF1-208ENST00000506063 DOPEY1Q5JWR5 2465 aa4.22□□□□□ -1.73
TCOF1-208ENST00000506063 DOCK8Q8NF50 2099 aa4.22□□□□□ -1.73
TCOF1-208ENST00000506063 A0A1W2PRG0 241 aa4.22□□□□□ -1.73
TCOF1-208ENST00000506063 PRR5-ARHGAP8B1AHC4 643 aa4.22□□□□□ -1.73
TCOF1-208ENST00000506063 C5orf67F2Z3F1 127 aa4.22□□□□□ -1.73
TCOF1-208ENST00000506063 ELL2O00472 640 aaPredicted RBP4.22□□□□□ -1.73
TCOF1-208ENST00000506063 SLC30A4O14863 429 aa4.22□□□□□ -1.73
TCOF1-208ENST00000506063 LGR5O75473 907 aa4.22□□□□□ -1.73
TCOF1-208ENST00000506063 GH2P01242 217 aa4.22□□□□□ -1.73
TCOF1-208ENST00000506063 HOXD8P13378 290 aaPredicted RBP4.22□□□□□ -1.73
TCOF1-208ENST00000506063 KCNJ6P48051 423 aa4.22□□□□□ -1.73
TCOF1-208ENST00000506063 ARHGAP8P85298 464 aa4.22□□□□□ -1.73
TCOF1-208ENST00000506063 ZNF200P98182 395 aaPredicted RBP4.22□□□□□ -1.73
TCOF1-208ENST00000506063 LMNB2Q03252 620 aa4.22□□□□□ -1.73
TCOF1-208ENST00000506063 COG2Q14746 738 aa4.22□□□□□ -1.73
TCOF1-208ENST00000506063 TMEM63BQ5T3F8 832 aa4.22□□□□□ -1.73
TCOF1-208ENST00000506063 FAM117BQ6P1L5 589 aa4.22□□□□□ -1.73
TCOF1-208ENST00000506063 TRAF7Q6Q0C0 670 aa4.22□□□□□ -1.73
TCOF1-208ENST00000506063 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.22□□□□□ -1.73
TCOF1-208ENST00000506063 ADGRD2Q7Z7M1 963 aa4.22□□□□□ -1.73
TCOF1-208ENST00000506063 FBXO11Q86XK2 927 aa4.22□□□□□ -1.73
TCOF1-208ENST00000506063 TMEM192Q8IY95 271 aa4.22□□□□□ -1.73
TCOF1-208ENST00000506063 UBALD2Q8IYN6 164 aa4.22□□□□□ -1.73
TCOF1-208ENST00000506063 ZGPATQ8N5A5 531 aaKnown RBP4.22□□□□□ -1.73
TCOF1-208ENST00000506063 TSPYL6Q8N831 410 aa4.22□□□□□ -1.73
TCOF1-208ENST00000506063 REPS2Q8NFH8 660 aa4.22□□□□□ -1.73
TCOF1-208ENST00000506063 VN1R2Q8NFZ6 395 aa4.22□□□□□ -1.73
TCOF1-208ENST00000506063 LINS1Q8NG48 757 aa4.22□□□□□ -1.73
TCOF1-208ENST00000506063 ATG4CQ96DT6 458 aa4.22□□□□□ -1.73
TCOF1-208ENST00000506063 MMP19Q99542 508 aa4.22□□□□□ -1.73
TCOF1-208ENST00000506063 HINFPQ9BQA5 517 aa4.22□□□□□ -1.73
TCOF1-208ENST00000506063 ZBED2Q9BTP6 218 aa4.22□□□□□ -1.73
TCOF1-208ENST00000506063 FTOQ9C0B1 505 aaKnown RBP eCLIP4.22□□□□□ -1.73
TCOF1-208ENST00000506063 SIL1Q9H173 461 aa4.22□□□□□ -1.73
TCOF1-208ENST00000506063 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.22□□□□□ -1.73
TCOF1-208ENST00000506063 PI4KBQ9UBF8 816 aa4.22□□□□□ -1.73
TCOF1-208ENST00000506063 BARX2Q9UMQ3 279 aaPredicted RBP4.22□□□□□ -1.73
TCOF1-208ENST00000506063 SORCS3Q9UPU3 1222 aa4.22□□□□□ -1.73
TCOF1-208ENST00000506063 WASF3Q9UPY6 502 aa4.22□□□□□ -1.73
TCOF1-208ENST00000506063 LAS1LQ9Y4W2 734 aaKnown RBP4.22□□□□□ -1.73
TCOF1-208ENST00000506063 INSL6Q9Y581 213 aa4.22□□□□□ -1.73
TCOF1-208ENST00000506063 MYH7BA7E2Y1 1941 aa4.22□□□□□ -1.73
TCOF1-208ENST00000506063 MYH8P13535 1937 aa4.22□□□□□ -1.73
TCOF1-208ENST00000506063 GREB1Q4ZG55 1949 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms