RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 FAM161BQ96MY7 647 aa29.11■■■□□ 2.25
HERC4-212ENST00000505760 TMEM47Q9BQJ4 181 aa29.11■■■□□ 2.25
HERC4-212ENST00000505760 MROH7Q68CQ1 1323 aa29.11■■■□□ 2.25
HERC4-212ENST00000505760 ICAM1P05362 532 aa29.1■■■□□ 2.25
HERC4-212ENST00000505760 MFAP1P55081 439 aaKnown RBP29.1■■■□□ 2.25
HERC4-212ENST00000505760 TNFAIP2Q03169 654 aa29.1■■■□□ 2.25
HERC4-212ENST00000505760 NSMFQ6X4W1 530 aa29.1■■■□□ 2.25
HERC4-212ENST00000505760 TCP11L1Q9NUJ3 509 aa29.1■■■□□ 2.25
HERC4-212ENST00000505760 CYP39A1Q9NYL5 469 aa29.1■■■□□ 2.25
HERC4-212ENST00000505760 SLC16A2P36021 539 aa29.09■■■□□ 2.25
HERC4-212ENST00000505760 FPGSQ05932 587 aa29.09■■■□□ 2.25
HERC4-212ENST00000505760 TTBK2Q6IQ55 1244 aa29.09■■■□□ 2.25
HERC4-212ENST00000505760 MFSD6Q6ZSS7 791 aa29.09■■■□□ 2.25
HERC4-212ENST00000505760 AKNAD1Q5T1N1 836 aa29.08■■■□□ 2.25
HERC4-212ENST00000505760 SYDE2Q5VT97 1194 aa29.08■■■□□ 2.25
HERC4-212ENST00000505760 CHD1LQ86WJ1 897 aa29.08■■■□□ 2.25
HERC4-212ENST00000505760 RANBP17Q9H2T7 1088 aaKnown RBP29.08■■■□□ 2.25
HERC4-212ENST00000505760 GPCPD1Q9NPB8 672 aa29.08■■■□□ 2.25
HERC4-212ENST00000505760 A0A0U1RQG5 324 aaPredicted RBP29.07■■■□□ 2.24
HERC4-212ENST00000505760 C11orf97A0A1B0GVM6 126 aaPredicted RBP29.07■■■□□ 2.24
HERC4-212ENST00000505760 PCP11498 1178 aaKnown RBP29.07■■■□□ 2.24
HERC4-212ENST00000505760 FRMPD2Q68DX3 1309 aaPredicted RBP29.07■■■□□ 2.24
HERC4-212ENST00000505760 BTNL9Q6UXG8 535 aa29.07■■■□□ 2.24
HERC4-212ENST00000505760 RNPC3Q96LT9 517 aaKnown RBP29.07■■■□□ 2.24
HERC4-212ENST00000505760 LRRC37A2A6NM11 1700 aa29.06■■■□□ 2.24
HERC4-212ENST00000505760 SDSP20132 328 aa29.06■■■□□ 2.24
HERC4-212ENST00000505760 EPHB4P54760 987 aa29.06■■■□□ 2.24
HERC4-212ENST00000505760 GUCD1Q96NT3 240 aa29.06■■■□□ 2.24
HERC4-212ENST00000505760 RNF41Q9H4P4 317 aaPredicted RBP29.06■■■□□ 2.24
HERC4-212ENST00000505760 ASTN1O14525 1302 aa29.05■■■□□ 2.24
HERC4-212ENST00000505760 LCTP09848 1927 aa29.05■■■□□ 2.24
HERC4-212ENST00000505760 CDK7P50613 346 aa29.05■■■□□ 2.24
HERC4-212ENST00000505760 SMAD3P84022 425 aaKnown RBP29.05■■■□□ 2.24
HERC4-212ENST00000505760 BEX3Q00994 111 aa29.05■■■□□ 2.24
HERC4-212ENST00000505760 EEPD1Q7L9B9 569 aa29.05■■■□□ 2.24
HERC4-212ENST00000505760 TLK2Q86UE8 772 aa29.05■■■□□ 2.24
HERC4-212ENST00000505760 PLEKHM2Q8IWE5 1019 aa29.05■■■□□ 2.24
HERC4-212ENST00000505760 TTC14Q96N46 770 aa29.05■■■□□ 2.24
HERC4-212ENST00000505760 AP5M1Q9H0R1 490 aa29.05■■■□□ 2.24
HERC4-212ENST00000505760 DDX49Q9Y6V7 483 aaKnown RBP29.05■■■□□ 2.24
HERC4-212ENST00000505760 ARVCFO00192 962 aa29.04■■■□□ 2.24
HERC4-212ENST00000505760 CTAGE5O15320 804 aa29.04■■■□□ 2.24
HERC4-212ENST00000505760 TIMP1P01033 207 aa29.04■■■□□ 2.24
HERC4-212ENST00000505760 NKX3-2P78367 333 aa29.04■■■□□ 2.24
HERC4-212ENST00000505760 NUCB1Q02818 461 aa29.04■■■□□ 2.24
HERC4-212ENST00000505760 FBXO16Q8IX29 292 aaPredicted RBP29.04■■■□□ 2.24
HERC4-212ENST00000505760 TBX21Q9UL17 535 aa29.04■■■□□ 2.24
HERC4-212ENST00000505760 GNEQ9Y223 722 aaKnown RBP29.04■■■□□ 2.24
HERC4-212ENST00000505760 UNC80Q8N2C7 3258 aa29.04■■■□□ 2.24
HERC4-212ENST00000505760 IGHDP01880 384 aa29.03■■■□□ 2.24
HERC4-212ENST00000505760 PDHBP11177 359 aa29.03■■■□□ 2.24
HERC4-212ENST00000505760 BAATQ14032 418 aaPredicted RBP29.03■■■□□ 2.24
HERC4-212ENST00000505760 TBC1D10CQ8IV04 446 aa29.03■■■□□ 2.24
HERC4-212ENST00000505760 ESR2Q92731 530 aa29.03■■■□□ 2.24
HERC4-212ENST00000505760 PURBQ96QR8 312 aaKnown RBP29.03■■■□□ 2.24
HERC4-212ENST00000505760 OSBPL3Q9H4L5 887 aa29.03■■■□□ 2.24
HERC4-212ENST00000505760 ADD3Q9UEY8 706 aaKnown RBP29.03■■■□□ 2.24
HERC4-212ENST00000505760 DLL1O00548 723 aa29.02■■■□□ 2.24
HERC4-212ENST00000505760 ZNF213O14771 459 aa29.02■■■□□ 2.24
HERC4-212ENST00000505760 TLR3O15455 904 aaKnown RBP29.02■■■□□ 2.24
HERC4-212ENST00000505760 SMPD1P17405 629 aa29.02■■■□□ 2.24
HERC4-212ENST00000505760 FSCN1Q16658 493 aaKnown RBP29.02■■■□□ 2.24
HERC4-212ENST00000505760 IQSEC1Q6DN90 963 aa29.02■■■□□ 2.24
HERC4-212ENST00000505760 VTA1Q9NP79 307 aa29.02■■■□□ 2.24
HERC4-212ENST00000505760 PDGFCQ9NRA1 345 aa29.02■■■□□ 2.24
HERC4-212ENST00000505760 DIAPH3Q9NSV4 1193 aa29.02■■■□□ 2.24
HERC4-212ENST00000505760 PTPDC1A2A3K4 754 aa29.01■■■□□ 2.23
HERC4-212ENST00000505760 NFIBO00712 420 aa29.01■■■□□ 2.23
HERC4-212ENST00000505760 DYNC1LI2O43237 492 aaPredicted RBP29.01■■■□□ 2.23
HERC4-212ENST00000505760 ZNF543Q08ER8 600 aa29.01■■■□□ 2.23
HERC4-212ENST00000505760 MFSD5Q6N075 450 aa29.01■■■□□ 2.23
HERC4-212ENST00000505760 TAPT1Q6NXT6 567 aa29.01■■■□□ 2.23
HERC4-212ENST00000505760 CWC27Q6UX04 472 aaKnown RBP29.01■■■□□ 2.23
HERC4-212ENST00000505760 CXCL17Q6UXB2 119 aa29.01■■■□□ 2.23
HERC4-212ENST00000505760 EXOC6Q8TAG9 804 aa29.01■■■□□ 2.23
HERC4-212ENST00000505760 SEMA6BQ9H3T3 888 aa29.01■■■□□ 2.23
HERC4-212ENST00000505760 PNMA2Q9UL42 364 aa29.01■■■□□ 2.23
HERC4-212ENST00000505760 LAMA4Q16363 1823 aa29■■■□□ 2.23
HERC4-212ENST00000505760 ZEB2O60315 1214 aa29■■■□□ 2.23
HERC4-212ENST00000505760 CABYRO75952 493 aa29■■■□□ 2.23
HERC4-212ENST00000505760 FAM126BQ8IXS8 530 aa29■■■□□ 2.23
HERC4-212ENST00000505760 NEDD4P46934 1319 aa28.99■■■□□ 2.23
HERC4-212ENST00000505760 KIAA1211Q6ZU35 1233 aa28.99■■■□□ 2.23
HERC4-212ENST00000505760 MORC4Q8TE76 937 aa28.99■■■□□ 2.23
HERC4-212ENST00000505760 ZKSCAN3Q9BRR0 538 aa28.99■■■□□ 2.23
HERC4-212ENST00000505760 Q9Y3F1 56 aa28.99■■■□□ 2.23
HERC4-212ENST00000505760 EYSQ5T1H1 3165 aa28.98■■■□□ 2.23
HERC4-212ENST00000505760 HIP1O00291 1037 aa28.98■■■□□ 2.23
HERC4-212ENST00000505760 SNHG28P0DPA3 235 aa28.98■■■□□ 2.23
HERC4-212ENST00000505760 PTGS1P23219 599 aa28.98■■■□□ 2.23
HERC4-212ENST00000505760 ALDH5A1P51649 535 aaPredicted RBP28.98■■■□□ 2.23
HERC4-212ENST00000505760 PPIGQ13427 754 aaKnown RBP eCLIP28.98■■■□□ 2.23
HERC4-212ENST00000505760 CDX2Q99626 313 aaPredicted RBP28.98■■■□□ 2.23
HERC4-212ENST00000505760 PPP1R12CQ9BZL4 782 aa28.98■■■□□ 2.23
HERC4-212ENST00000505760 CDH23Q9H251 3354 aa28.97■■■□□ 2.23
HERC4-212ENST00000505760 CALML3P27482 149 aa28.97■■■□□ 2.23
HERC4-212ENST00000505760 GPATCH4Q5T3I0 446 aaKnown RBP28.97■■■□□ 2.23
HERC4-212ENST00000505760 DGKHQ86XP1 1220 aa28.97■■■□□ 2.23
HERC4-212ENST00000505760 TMEM199Q8N511 208 aa28.97■■■□□ 2.23
HERC4-212ENST00000505760 LOC102724159A0A0B4J2E5 919 aa28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms