RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 RPN1P04843 607 aaKnown RBP19.49■□□□□ 0.71
TRAPPC11-204ENST00000505676 ATP1A3P13637 1013 aa19.49■□□□□ 0.71
TRAPPC11-204ENST00000505676 FMR1Q06787 632 aaKnown RBP eCLIP19.49■□□□□ 0.71
TRAPPC11-204ENST00000505676 LRMPQ12912 555 aa19.49■□□□□ 0.71
TRAPPC11-204ENST00000505676 DLGAP5Q15398 846 aa19.49■□□□□ 0.71
TRAPPC11-204ENST00000505676 CABP7Q86V35 215 aa19.49■□□□□ 0.71
TRAPPC11-204ENST00000505676 CALML4Q96GE6 196 aa19.49■□□□□ 0.71
TRAPPC11-204ENST00000505676 LRRC27Q9C0I9 530 aa19.49■□□□□ 0.71
TRAPPC11-204ENST00000505676 BIN2Q9UBW5 565 aaPredicted RBP19.49■□□□□ 0.71
TRAPPC11-204ENST00000505676 STK17AQ9UEE5 414 aa19.49■□□□□ 0.71
TRAPPC11-204ENST00000505676 R3HCC1Q9Y3T6 440 aaKnown RBP19.49■□□□□ 0.71
TRAPPC11-204ENST00000505676 KIF2AO00139 706 aaPredicted RBP19.48■□□□□ 0.71
TRAPPC11-204ENST00000505676 TUBB4AP04350 444 aa19.48■□□□□ 0.71
TRAPPC11-204ENST00000505676 CACNB3P54284 484 aa19.48■□□□□ 0.71
TRAPPC11-204ENST00000505676 CCZ1BP86790 482 aa19.48■□□□□ 0.71
TRAPPC11-204ENST00000505676 CCZ1P86791 482 aaPredicted RBP19.48■□□□□ 0.71
TRAPPC11-204ENST00000505676 AP3B2Q13367 1082 aa19.48■□□□□ 0.71
TRAPPC11-204ENST00000505676 STIM1Q13586 685 aa19.48■□□□□ 0.71
TRAPPC11-204ENST00000505676 CALCRLQ16602 461 aa19.48■□□□□ 0.71
TRAPPC11-204ENST00000505676 JAKMIP3Q5VZ66 844 aa19.48■□□□□ 0.71
TRAPPC11-204ENST00000505676 MOXD1Q6UVY6 613 aa19.48■□□□□ 0.71
TRAPPC11-204ENST00000505676 COA7Q96BR5 231 aa19.48■□□□□ 0.71
TRAPPC11-204ENST00000505676 MTMR9Q96QG7 549 aa19.48■□□□□ 0.71
TRAPPC11-204ENST00000505676 ZNRF3Q9ULT6 936 aa19.48■□□□□ 0.71
TRAPPC11-204ENST00000505676 PPP1R3GB7ZBB8 358 aa19.48■□□□□ 0.71
TRAPPC11-204ENST00000505676 KARSQ15046 597 aaKnown RBP19.48■□□□□ 0.71
TRAPPC11-204ENST00000505676 NIM1KQ8IY84 436 aa19.48■□□□□ 0.71
TRAPPC11-204ENST00000505676 PRMT6Q96LA8 375 aaPredicted RBP19.48■□□□□ 0.71
TRAPPC11-204ENST00000505676 CSRNP1Q96S65 589 aa19.48■□□□□ 0.71
TRAPPC11-204ENST00000505676 PSTPIP2Q9H939 334 aa19.48■□□□□ 0.71
TRAPPC11-204ENST00000505676 TBC1D12O60347 775 aa19.47■□□□□ 0.71
TRAPPC11-204ENST00000505676 BTNL9Q6UXG8 535 aa19.47■□□□□ 0.71
TRAPPC11-204ENST00000505676 FAM83AQ86UY5 434 aa19.47■□□□□ 0.71
TRAPPC11-204ENST00000505676 CCDC125Q86Z20 511 aa19.47■□□□□ 0.71
TRAPPC11-204ENST00000505676 CLEC10AQ8IUN9 316 aa19.47■□□□□ 0.71
TRAPPC11-204ENST00000505676 ANKRD20A12PQ8NF67 263 aa19.47■□□□□ 0.71
TRAPPC11-204ENST00000505676 ARHGEF10LQ9HCE6 1279 aa19.47■□□□□ 0.71
TRAPPC11-204ENST00000505676 DPEP1P16444 411 aa19.47■□□□□ 0.71
TRAPPC11-204ENST00000505676 KCNA3P22001 575 aa19.47■□□□□ 0.71
TRAPPC11-204ENST00000505676 SEPT2Q15019 361 aa19.47■□□□□ 0.71
TRAPPC11-204ENST00000505676 SPDYE2Q495Y8 402 aa19.47■□□□□ 0.71
TRAPPC11-204ENST00000505676 FILIP1LQ4L180 1135 aa19.47■□□□□ 0.71
TRAPPC11-204ENST00000505676 ARFGEF1Q9Y6D6 1849 aa19.46■□□□□ 0.71
TRAPPC11-204ENST00000505676 USP17L10C9JJH3 530 aa19.46■□□□□ 0.71
TRAPPC11-204ENST00000505676 USP11P51784 963 aa19.46■□□□□ 0.71
TRAPPC11-204ENST00000505676 PAK1Q13153 545 aa19.46■□□□□ 0.71
TRAPPC11-204ENST00000505676 NAALADL2Q58DX5 795 aa19.46■□□□□ 0.71
TRAPPC11-204ENST00000505676 CDKAL1Q5VV42 579 aa19.46■□□□□ 0.71
TRAPPC11-204ENST00000505676 TTBK2Q6IQ55 1244 aa19.46■□□□□ 0.71
TRAPPC11-204ENST00000505676 KCTD1Q719H9 257 aa19.46■□□□□ 0.71
TRAPPC11-204ENST00000505676 PCDHAC2Q9Y5I4 1007 aa19.46■□□□□ 0.71
TRAPPC11-204ENST00000505676 F5H6K3 240 aa19.45■□□□□ 0.7
TRAPPC11-204ENST00000505676 PSMD14O00487 310 aa19.45■□□□□ 0.7
TRAPPC11-204ENST00000505676 RHOBTB3O94955 611 aa19.45■□□□□ 0.7
TRAPPC11-204ENST00000505676 KLRC3Q07444 240 aa19.45■□□□□ 0.7
TRAPPC11-204ENST00000505676 FCHSD1Q86WN1 690 aa19.45■□□□□ 0.7
TRAPPC11-204ENST00000505676 MTRQ99707 1265 aa19.45■□□□□ 0.7
TRAPPC11-204ENST00000505676 AMNQ9BXJ7 453 aa19.45■□□□□ 0.7
TRAPPC11-204ENST00000505676 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.45■□□□□ 0.7
TRAPPC11-204ENST00000505676 PIM2Q9P1W9 311 aa19.45■□□□□ 0.7
TRAPPC11-204ENST00000505676 ZNF70Q9UC06 446 aaPredicted RBP19.45■□□□□ 0.7
TRAPPC11-204ENST00000505676 ATF5Q9Y2D1 282 aaPredicted RBP19.45■□□□□ 0.7
TRAPPC11-204ENST00000505676 A0A1B0GTH6 734 aa19.45■□□□□ 0.7
TRAPPC11-204ENST00000505676 PSDA5PKW4 1024 aaPredicted RBP19.45■□□□□ 0.7
TRAPPC11-204ENST00000505676 FOSP01100 380 aaPredicted RBP19.45■□□□□ 0.7
TRAPPC11-204ENST00000505676 CDC37Q16543 378 aaPredicted RBP19.45■□□□□ 0.7
TRAPPC11-204ENST00000505676 TPD52L1Q16890 204 aaPredicted RBP19.45■□□□□ 0.7
TRAPPC11-204ENST00000505676 QRICH1Q2TAL8 776 aa19.45■□□□□ 0.7
TRAPPC11-204ENST00000505676 COBLL1Q53SF7 1204 aa19.45■□□□□ 0.7
TRAPPC11-204ENST00000505676 SPECC1LQ69YQ0 1117 aa19.45■□□□□ 0.7
TRAPPC11-204ENST00000505676 NOC3LQ8WTT2 800 aaKnown RBP19.45■□□□□ 0.7
TRAPPC11-204ENST00000505676 C7orf25Q9BPX7 421 aa19.45■□□□□ 0.7
TRAPPC11-204ENST00000505676 SH2D4AQ9H788 454 aa19.45■□□□□ 0.7
TRAPPC11-204ENST00000505676 STK24Q9Y6E0 443 aa19.45■□□□□ 0.7
TRAPPC11-204ENST00000505676 PPP1R11O60927 126 aaPredicted RBP19.44■□□□□ 0.7
TRAPPC11-204ENST00000505676 TMEM260Q9NX78 707 aa19.44■□□□□ 0.7
TRAPPC11-204ENST00000505676 BMP3P12645 472 aa19.44■□□□□ 0.7
TRAPPC11-204ENST00000505676 SIAH1Q8IUQ4 282 aa19.44■□□□□ 0.7
TRAPPC11-204ENST00000505676 GOPCQ9HD26 462 aa19.44■□□□□ 0.7
TRAPPC11-204ENST00000505676 PCDHA1Q9Y5I3 950 aa19.44■□□□□ 0.7
TRAPPC11-204ENST00000505676 H7C1D1 291 aa19.43■□□□□ 0.7
TRAPPC11-204ENST00000505676 NDUFB10O96000 172 aa19.43■□□□□ 0.7
TRAPPC11-204ENST00000505676 CD44P16070 742 aaKnown RBP19.43■□□□□ 0.7
TRAPPC11-204ENST00000505676 PLCG1P19174 1290 aa19.43■□□□□ 0.7
TRAPPC11-204ENST00000505676 TNNI2P48788 182 aa19.43■□□□□ 0.7
TRAPPC11-204ENST00000505676 NR1I3Q14994 352 aa19.43■□□□□ 0.7
TRAPPC11-204ENST00000505676 SYDE2Q5VT97 1194 aa19.43■□□□□ 0.7
TRAPPC11-204ENST00000505676 ARMCX5Q6P1M9 558 aa19.43■□□□□ 0.7
TRAPPC11-204ENST00000505676 POTEDQ86YR6 584 aa19.43■□□□□ 0.7
TRAPPC11-204ENST00000505676 BLZF1Q9H2G9 400 aa19.43■□□□□ 0.7
TRAPPC11-204ENST00000505676 LRWD1Q9UFC0 647 aa19.43■□□□□ 0.7
TRAPPC11-204ENST00000505676 PAXBP1Q9Y5B6 917 aa19.43■□□□□ 0.7
TRAPPC11-204ENST00000505676 GH2P01242 217 aa19.43■□□□□ 0.7
TRAPPC11-204ENST00000505676 SLC16A2P36021 539 aa19.43■□□□□ 0.7
TRAPPC11-204ENST00000505676 TBX2Q13207 712 aaPredicted RBP19.43■□□□□ 0.7
TRAPPC11-204ENST00000505676 CNNM4Q6P4Q7 775 aa19.43■□□□□ 0.7
TRAPPC11-204ENST00000505676 TRMT44Q8IYL2 757 aaKnown RBP19.43■□□□□ 0.7
TRAPPC11-204ENST00000505676 DPF2Q92785 391 aa19.43■□□□□ 0.7
TRAPPC11-204ENST00000505676 MED15Q96RN5 788 aa19.43■□□□□ 0.7
TRAPPC11-204ENST00000505676 KDM3AQ9Y4C1 1321 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms