RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 FAM126BQ8IXS8 530 aa6.98□□□□□ -1.29
GYPB-205ENST00000505583 ZNF444Q8N0Y2 327 aaPredicted RBP6.98□□□□□ -1.29
GYPB-205ENST00000505583 ANKRD35Q8N283 1001 aa6.98□□□□□ -1.29
GYPB-205ENST00000505583 MSL3Q8N5Y2 521 aaKnown RBP6.98□□□□□ -1.29
GYPB-205ENST00000505583 FAM133AQ8N9E0 248 aa6.98□□□□□ -1.29
GYPB-205ENST00000505583 GMCL1P1Q8NEA9 526 aa6.98□□□□□ -1.29
GYPB-205ENST00000505583 PI4K2BQ8TCG2 481 aa6.98□□□□□ -1.29
GYPB-205ENST00000505583 AGBL1Q96MI9 1066 aa6.98□□□□□ -1.29
GYPB-205ENST00000505583 TOX2Q96NM4 488 aa6.98□□□□□ -1.29
GYPB-205ENST00000505583 PURBQ96QR8 312 aaKnown RBP6.98□□□□□ -1.29
GYPB-205ENST00000505583 UPF3AQ9H1J1 476 aaKnown RBP6.98□□□□□ -1.29
GYPB-205ENST00000505583 PRDM6Q9NQX0 595 aa6.98□□□□□ -1.29
GYPB-205ENST00000505583 IL17RBQ9NRM6 502 aa6.98□□□□□ -1.29
GYPB-205ENST00000505583 PCDHB15Q9Y5E8 787 aa6.98□□□□□ -1.29
GYPB-205ENST00000505583 PRUNE2Q8WUY3 3088 aa6.98□□□□□ -1.29
GYPB-205ENST00000505583 GRIN2DO15399 1336 aa6.98□□□□□ -1.29
GYPB-205ENST00000505583 UMODL1Q5DID0 1318 aa6.98□□□□□ -1.29
GYPB-205ENST00000505583 TMEM232C9JQI7 657 aa6.97□□□□□ -1.29
GYPB-205ENST00000505583 RBAK-RBAKDNI3L0D1 243 aa6.97□□□□□ -1.29
GYPB-205ENST00000505583 TTLL1O95922 423 aa6.97□□□□□ -1.29
GYPB-205ENST00000505583 BMP3P12645 472 aa6.97□□□□□ -1.29
GYPB-205ENST00000505583 DNAJB2P25686 324 aa6.97□□□□□ -1.29
GYPB-205ENST00000505583 CYP2C18P33260 490 aa6.97□□□□□ -1.29
GYPB-205ENST00000505583 GJA9P57773 515 aa6.97□□□□□ -1.29
GYPB-205ENST00000505583 TFAP4Q01664 338 aa6.97□□□□□ -1.29
GYPB-205ENST00000505583 MUM1L1Q5H9M0 696 aa6.97□□□□□ -1.29
GYPB-205ENST00000505583 GNASQ5JWF2 1037 aa6.97□□□□□ -1.29
GYPB-205ENST00000505583 TMEM240Q5SV17 173 aa6.97□□□□□ -1.29
GYPB-205ENST00000505583 RASIP1Q5U651 963 aa6.97□□□□□ -1.29
GYPB-205ENST00000505583 VPS53Q5VIR6 699 aa6.97□□□□□ -1.29
GYPB-205ENST00000505583 MFSD5Q6N075 450 aa6.97□□□□□ -1.29
GYPB-205ENST00000505583 CXCL17Q6UXB2 119 aa6.97□□□□□ -1.29
GYPB-205ENST00000505583 CCDC129Q6ZRS4 1044 aa6.97□□□□□ -1.29
GYPB-205ENST00000505583 KCTD1Q719H9 257 aa6.97□□□□□ -1.29
GYPB-205ENST00000505583 CHST13Q8NET6 341 aa6.97□□□□□ -1.29
GYPB-205ENST00000505583 NEDD1Q8NHV4 660 aa6.97□□□□□ -1.29
GYPB-205ENST00000505583 KCNV2Q8TDN2 545 aa6.97□□□□□ -1.29
GYPB-205ENST00000505583 NUP133Q8WUM0 1156 aa6.97□□□□□ -1.29
GYPB-205ENST00000505583 GLT1D1Q96MS3 346 aa6.97□□□□□ -1.29
GYPB-205ENST00000505583 PPP1R12CQ9BZL4 782 aa6.97□□□□□ -1.29
GYPB-205ENST00000505583 ABHD16BQ9H3Z7 469 aa6.97□□□□□ -1.29
GYPB-205ENST00000505583 ZNF576Q9H609 170 aa6.97□□□□□ -1.29
GYPB-205ENST00000505583 A1CFQ9NQ94 594 aaKnown RBP6.97□□□□□ -1.29
GYPB-205ENST00000505583 PDGFCQ9NRA1 345 aa6.97□□□□□ -1.29
GYPB-205ENST00000505583 CXXC1Q9P0U4 656 aaPredicted RBP6.97□□□□□ -1.29
GYPB-205ENST00000505583 FEM1BQ9UK73 627 aa6.97□□□□□ -1.29
GYPB-205ENST00000505583 ELP1O95163 1332 aa6.97□□□□□ -1.29
GYPB-205ENST00000505583 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.96□□□□□ -1.3
GYPB-205ENST00000505583 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.96□□□□□ -1.3
GYPB-205ENST00000505583 ARVCFO00192 962 aa6.96□□□□□ -1.3
GYPB-205ENST00000505583 CD4P01730 458 aa6.96□□□□□ -1.3
GYPB-205ENST00000505583 ZFYP08048 801 aaPredicted RBP6.96□□□□□ -1.3
GYPB-205ENST00000505583 TSPY3P0CV98 308 aa6.96□□□□□ -1.3
GYPB-205ENST00000505583 TSPY8P0CW00 308 aa6.96□□□□□ -1.3
GYPB-205ENST00000505583 SMPD1P17405 629 aa6.96□□□□□ -1.3
GYPB-205ENST00000505583 GNAT2P19087 354 aa6.96□□□□□ -1.3
GYPB-205ENST00000505583 MCCP23508 829 aa6.96□□□□□ -1.3
GYPB-205ENST00000505583 OAZ1P54368 228 aa6.96□□□□□ -1.3
GYPB-205ENST00000505583 NKX3-2P78367 333 aa6.96□□□□□ -1.3
GYPB-205ENST00000505583 TNFAIP2Q03169 654 aa6.96□□□□□ -1.3
GYPB-205ENST00000505583 CTDSPL2Q05D32 466 aa6.96□□□□□ -1.3
GYPB-205ENST00000505583 PPARAQ07869 468 aa6.96□□□□□ -1.3
GYPB-205ENST00000505583 ZMYM1Q5SVZ6 1142 aa6.96□□□□□ -1.3
GYPB-205ENST00000505583 CCDC174Q6PII3 467 aa6.96□□□□□ -1.3
GYPB-205ENST00000505583 ZNF365Q70YC5 407 aa6.96□□□□□ -1.3
GYPB-205ENST00000505583 EEPD1Q7L9B9 569 aa6.96□□□□□ -1.3
GYPB-205ENST00000505583 VTI1AQ96AJ9 217 aa6.96□□□□□ -1.3
GYPB-205ENST00000505583 TIFAQ96CG3 184 aa6.96□□□□□ -1.3
GYPB-205ENST00000505583 VWCEQ96DN2 955 aa6.96□□□□□ -1.3
GYPB-205ENST00000505583 PBX4Q9BYU1 374 aa6.96□□□□□ -1.3
GYPB-205ENST00000505583 CHMP4BQ9H444 224 aaKnown RBP6.96□□□□□ -1.3
GYPB-205ENST00000505583 RNF146Q9NTX7 359 aa6.96□□□□□ -1.3
GYPB-205ENST00000505583 GNEQ9Y223 722 aaKnown RBP6.96□□□□□ -1.3
GYPB-205ENST00000505583 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.96□□□□□ -1.3
GYPB-205ENST00000505583 SCN5AQ14524 2016 aa6.96□□□□□ -1.3
GYPB-205ENST00000505583 SALL3Q9BXA9 1300 aa6.96□□□□□ -1.3
GYPB-205ENST00000505583 TMEM265A0A087WTH1 108 aa6.95□□□□□ -1.3
GYPB-205ENST00000505583 A0A0U1RQG5 324 aaPredicted RBP6.95□□□□□ -1.3
GYPB-205ENST00000505583 ALAS1P13196 640 aa6.95□□□□□ -1.3
GYPB-205ENST00000505583 SLC16A2P36021 539 aa6.95□□□□□ -1.3
GYPB-205ENST00000505583 SLC1A4P43007 532 aa6.95□□□□□ -1.3
GYPB-205ENST00000505583 STAT2P52630 851 aa6.95□□□□□ -1.3
GYPB-205ENST00000505583 PSMC6P62333 389 aa6.95□□□□□ -1.3
GYPB-205ENST00000505583 ADGRE1Q14246 886 aa6.95□□□□□ -1.3
GYPB-205ENST00000505583 TTBK2Q6IQ55 1244 aa6.95□□□□□ -1.3
GYPB-205ENST00000505583 TAPT1Q6NXT6 567 aa6.95□□□□□ -1.3
GYPB-205ENST00000505583 TLK2Q86UE8 772 aa6.95□□□□□ -1.3
GYPB-205ENST00000505583 FBXO16Q8IX29 292 aaPredicted RBP6.95□□□□□ -1.3
GYPB-205ENST00000505583 SLC43A3Q8NBI5 491 aa6.95□□□□□ -1.3
GYPB-205ENST00000505583 PCSK9Q8NBP7 692 aaKnown RBP6.95□□□□□ -1.3
GYPB-205ENST00000505583 PPP1R13LQ8WUF5 828 aa6.95□□□□□ -1.3
GYPB-205ENST00000505583 STAG1Q8WVM7 1258 aa6.95□□□□□ -1.3
GYPB-205ENST00000505583 GPATCH3Q96I76 525 aa6.95□□□□□ -1.3
GYPB-205ENST00000505583 GMCL1Q96IK5 515 aa6.95□□□□□ -1.3
GYPB-205ENST00000505583 TRERF1Q96PN7 1200 aa6.95□□□□□ -1.3
GYPB-205ENST00000505583 FSD1Q9BTV5 496 aa6.95□□□□□ -1.3
GYPB-205ENST00000505583 NAPBQ9H115 298 aa6.95□□□□□ -1.3
GYPB-205ENST00000505583 TRPV6Q9H1D0 765 aa6.95□□□□□ -1.3
GYPB-205ENST00000505583 PRDM12Q9H4Q4 367 aa6.95□□□□□ -1.3
GYPB-205ENST00000505583 ACAD9Q9H845 621 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms