RNA–Protein interactions for RNA: ENST00000505331.1

CPNE4-204, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-204ENST00000505331 RRP1P56182 461 aaKnown RBP5.28□□□□□ -1.56
CPNE4-204ENST00000505331 JAG1P78504 1218 aa5.28□□□□□ -1.56
CPNE4-204ENST00000505331 DEFB103AP81534 67 aa5.28□□□□□ -1.56
CPNE4-204ENST00000505331 COASYQ13057 564 aa5.28□□□□□ -1.56
CPNE4-204ENST00000505331 ADAM15Q13444 863 aa5.28□□□□□ -1.56
CPNE4-204ENST00000505331 CNGB1Q14028 1251 aaPredicted RBP5.28□□□□□ -1.56
CPNE4-204ENST00000505331 COG2Q14746 738 aa5.28□□□□□ -1.56
CPNE4-204ENST00000505331 LRRFIP1Q32MZ4 808 aaKnown RBP5.28□□□□□ -1.56
CPNE4-204ENST00000505331 LMBR1LQ6UX01 489 aa5.28□□□□□ -1.56
CPNE4-204ENST00000505331 KDF1Q8NAX2 398 aaPredicted RBP5.28□□□□□ -1.56
CPNE4-204ENST00000505331 KREMEN2Q8NCW0 462 aa5.28□□□□□ -1.56
CPNE4-204ENST00000505331 BORCS6Q96GS4 357 aa5.28□□□□□ -1.56
CPNE4-204ENST00000505331 MMP19Q99542 508 aa5.28□□□□□ -1.56
CPNE4-204ENST00000505331 RTP3Q9BQQ7 232 aa5.28□□□□□ -1.56
CPNE4-204ENST00000505331 KIAA1683Q9H0B3 1180 aa5.28□□□□□ -1.56
CPNE4-204ENST00000505331 LMAN2LQ9H0V9 348 aa5.28□□□□□ -1.56
CPNE4-204ENST00000505331 RPAP3Q9H6T3 665 aaPredicted RBP5.28□□□□□ -1.56
CPNE4-204ENST00000505331 INCENPQ9NQS7 918 aa5.28□□□□□ -1.56
CPNE4-204ENST00000505331 NCDNQ9UBB6 729 aa5.28□□□□□ -1.56
CPNE4-204ENST00000505331 PI4KBQ9UBF8 816 aa5.28□□□□□ -1.56
CPNE4-204ENST00000505331 ZBTB21Q9ULJ3 1066 aa5.28□□□□□ -1.56
CPNE4-204ENST00000505331 SORCS3Q9UPU3 1222 aa5.28□□□□□ -1.56
CPNE4-204ENST00000505331 USP15Q9Y4E8 981 aaPredicted RBP5.28□□□□□ -1.56
CPNE4-204ENST00000505331 LAS1LQ9Y4W2 734 aaKnown RBP5.28□□□□□ -1.56
CPNE4-204ENST00000505331 MAST4O15021 2626 aa5.28□□□□□ -1.56
CPNE4-204ENST00000505331 SPEGQ15772 3267 aa5.28□□□□□ -1.56
CPNE4-204ENST00000505331 GBF1Q92538 1859 aa5.28□□□□□ -1.56
CPNE4-204ENST00000505331 FLNBO75369 2602 aaKnown RBP5.27□□□□□ -1.57
CPNE4-204ENST00000505331 ABHD14A-ACY1A0A1B0GW23 586 aa5.27□□□□□ -1.57
CPNE4-204ENST00000505331 CCER2I3L3R5 266 aa5.27□□□□□ -1.57
CPNE4-204ENST00000505331 PDE8BO95263 885 aa5.27□□□□□ -1.57
CPNE4-204ENST00000505331 IFIT1P09914 478 aaKnown RBP5.27□□□□□ -1.57
CPNE4-204ENST00000505331 BTDP43251 543 aa5.27□□□□□ -1.57
CPNE4-204ENST00000505331 MAP1BP46821 2468 aaKnown RBP5.27□□□□□ -1.57
CPNE4-204ENST00000505331 ZNF200P98182 395 aaPredicted RBP5.27□□□□□ -1.57
CPNE4-204ENST00000505331 ACVR2BQ13705 512 aa5.27□□□□□ -1.57
CPNE4-204ENST00000505331 PLS1Q14651 629 aa5.27□□□□□ -1.57
CPNE4-204ENST00000505331 ZYXQ15942 572 aaKnown RBP5.27□□□□□ -1.57
CPNE4-204ENST00000505331 VARS2Q5ST30 1063 aaKnown RBP5.27□□□□□ -1.57
CPNE4-204ENST00000505331 ERICH6BQ5W0A0 696 aa5.27□□□□□ -1.57
CPNE4-204ENST00000505331 CWF19L1Q69YN2 538 aaKnown RBP5.27□□□□□ -1.57
CPNE4-204ENST00000505331 MAMDC4Q6UXC1 1216 aa5.27□□□□□ -1.57
CPNE4-204ENST00000505331 SUMF1Q8NBK3 374 aa5.27□□□□□ -1.57
CPNE4-204ENST00000505331 DDX1Q92499 740 aaKnown RBP5.27□□□□□ -1.57
CPNE4-204ENST00000505331 SECISBP2LQ93073 1101 aaKnown RBP5.27□□□□□ -1.57
CPNE4-204ENST00000505331 DHX36Q9H2U1 1008 aaKnown RBP5.27□□□□□ -1.57
CPNE4-204ENST00000505331 TRMT13Q9NUP7 481 aaKnown RBP5.27□□□□□ -1.57
CPNE4-204ENST00000505331 BOLA1Q9Y3E2 137 aa5.27□□□□□ -1.57
CPNE4-204ENST00000505331 WDR87Q6ZQQ6 2873 aa5.27□□□□□ -1.57
CPNE4-204ENST00000505331 SPEF2Q9C093 1822 aa5.27□□□□□ -1.57
CPNE4-204ENST00000505331 A0A1B0GUL6 1792 aa5.27□□□□□ -1.57
CPNE4-204ENST00000505331 TMEM8BA6NDV4 472 aa5.26□□□□□ -1.57
CPNE4-204ENST00000505331 SLC30A4O14863 429 aa5.26□□□□□ -1.57
CPNE4-204ENST00000505331 LINC01565O15544 149 aa5.26□□□□□ -1.57
CPNE4-204ENST00000505331 ADCY6O43306 1168 aa5.26□□□□□ -1.57
CPNE4-204ENST00000505331 PI15O43692 258 aa5.26□□□□□ -1.57
CPNE4-204ENST00000505331 GDF11O95390 407 aa5.26□□□□□ -1.57
CPNE4-204ENST00000505331 BRD1O95696 1058 aa5.26□□□□□ -1.57
CPNE4-204ENST00000505331 NEFLP07196 543 aa5.26□□□□□ -1.57
CPNE4-204ENST00000505331 HSPA5P11021 654 aaKnown RBP5.26□□□□□ -1.57
CPNE4-204ENST00000505331 RHBDL3P58872 404 aa5.26□□□□□ -1.57
CPNE4-204ENST00000505331 HTRA4P83105 476 aaPredicted RBP5.26□□□□□ -1.57
CPNE4-204ENST00000505331 BEX3Q00994 111 aa5.26□□□□□ -1.57
CPNE4-204ENST00000505331 BFSP2Q13515 415 aa5.26□□□□□ -1.57
CPNE4-204ENST00000505331 FSCN1Q16658 493 aaKnown RBP5.26□□□□□ -1.57
CPNE4-204ENST00000505331 CCDC144BQ3MJ40 725 aa5.26□□□□□ -1.57
CPNE4-204ENST00000505331 METTL24Q5JXM2 366 aa5.26□□□□□ -1.57
CPNE4-204ENST00000505331 CCDC30Q5VVM6 783 aa5.26□□□□□ -1.57
CPNE4-204ENST00000505331 CNKSR3Q6P9H4 555 aa5.26□□□□□ -1.57
CPNE4-204ENST00000505331 UNQ6494/PRO21346Q6UXR6 183 aa5.26□□□□□ -1.57
CPNE4-204ENST00000505331 METTL16Q86W50 562 aaKnown RBP5.26□□□□□ -1.57
CPNE4-204ENST00000505331 FBXO11Q86XK2 927 aa5.26□□□□□ -1.57
CPNE4-204ENST00000505331 DZIP1Q86YF9 867 aaKnown RBP5.26□□□□□ -1.57
CPNE4-204ENST00000505331 FOXP4Q8IVH2 680 aaPredicted RBP5.26□□□□□ -1.57
CPNE4-204ENST00000505331 TMEM192Q8IY95 271 aa5.26□□□□□ -1.57
CPNE4-204ENST00000505331 FLCNQ8NFG4 579 aa5.26□□□□□ -1.57
CPNE4-204ENST00000505331 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.26□□□□□ -1.57
CPNE4-204ENST00000505331 PPP2R3CQ969Q6 453 aa5.26□□□□□ -1.57
CPNE4-204ENST00000505331 TRIM34Q9BYJ4 488 aa5.26□□□□□ -1.57
CPNE4-204ENST00000505331 PUS3Q9BZE2 481 aaKnown RBP5.26□□□□□ -1.57
CPNE4-204ENST00000505331 ABHD16BQ9H3Z7 469 aa5.26□□□□□ -1.57
CPNE4-204ENST00000505331 IGFLR1Q9H665 355 aa5.26□□□□□ -1.57
CPNE4-204ENST00000505331 TSHZ2Q9NRE2 1034 aa5.26□□□□□ -1.57
CPNE4-204ENST00000505331 CLEC1BQ9P126 229 aa5.26□□□□□ -1.57
CPNE4-204ENST00000505331 MYO9BQ13459 2157 aa5.26□□□□□ -1.57
CPNE4-204ENST00000505331 GPR75-ASB3A0A0A6YYF3 556 aa5.25□□□□□ -1.57
CPNE4-204ENST00000505331 SRRM3A6NNA2 597 aaPredicted RBP5.25□□□□□ -1.57
CPNE4-204ENST00000505331 C1QTNF9BB2RNN3 333 aa5.25□□□□□ -1.57
CPNE4-204ENST00000505331 KINO60870 393 aaKnown RBP5.25□□□□□ -1.57
CPNE4-204ENST00000505331 PARNO95453 639 aaKnown RBP5.25□□□□□ -1.57
CPNE4-204ENST00000505331 RB1P06400 928 aa5.25□□□□□ -1.57
CPNE4-204ENST00000505331 C1QTNF9P0C862 333 aa5.25□□□□□ -1.57
CPNE4-204ENST00000505331 SMPD1P17405 629 aa5.25□□□□□ -1.57
CPNE4-204ENST00000505331 PPP2R1AP30153 589 aa5.25□□□□□ -1.57
CPNE4-204ENST00000505331 GTF2F1P35269 517 aaKnown RBP eCLIP5.25□□□□□ -1.57
CPNE4-204ENST00000505331 COPB2P35606 906 aa5.25□□□□□ -1.57
CPNE4-204ENST00000505331 PSMC6P62333 389 aa5.25□□□□□ -1.57
CPNE4-204ENST00000505331 IKBKEQ14164 716 aa5.25□□□□□ -1.57
CPNE4-204ENST00000505331 PUM3Q15397 648 aaKnown RBP5.25□□□□□ -1.57
CPNE4-204ENST00000505331 SHROOM1Q2M3G4 852 aaPredicted RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms