RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 ARMCX2Q7L311 632 aa19.06■□□□□ 0.64
PDLIM7-213ENST00000505074 ANKRD35Q8N283 1001 aa19.06■□□□□ 0.64
PDLIM7-213ENST00000505074 ZNF287Q9HBT7 754 aa19.06■□□□□ 0.64
PDLIM7-213ENST00000505074 CTDP1Q9Y5B0 961 aaPredicted RBP19.06■□□□□ 0.64
PDLIM7-213ENST00000505074 PCDHB15Q9Y5E8 787 aa19.06■□□□□ 0.64
PDLIM7-213ENST00000505074 XIRP2A4UGR9 3374 aa19.06■□□□□ 0.64
PDLIM7-213ENST00000505074 RFXAPO00287 272 aa19.05■□□□□ 0.64
PDLIM7-213ENST00000505074 CTAGE5O15320 804 aa19.05■□□□□ 0.64
PDLIM7-213ENST00000505074 PRDM1O75626 825 aa19.05■□□□□ 0.64
PDLIM7-213ENST00000505074 NOL8Q76FK4 1167 aaKnown RBP19.05■□□□□ 0.64
PDLIM7-213ENST00000505074 ZNF444Q8N0Y2 327 aaPredicted RBP19.05■□□□□ 0.64
PDLIM7-213ENST00000505074 NUP88Q99567 741 aaPredicted RBP19.05■□□□□ 0.64
PDLIM7-213ENST00000505074 NOC4LQ9BVI4 516 aaKnown RBP19.05■□□□□ 0.64
PDLIM7-213ENST00000505074 NACAP1Q9BZK3 213 aa19.05■□□□□ 0.64
PDLIM7-213ENST00000505074 EPB41L4AQ9HCS5 686 aaPredicted RBP19.05■□□□□ 0.64
PDLIM7-213ENST00000505074 ISY1Q9ULR0 285 aaKnown RBP19.05■□□□□ 0.64
PDLIM7-213ENST00000505074 RRP1P56182 461 aaKnown RBP19.04■□□□□ 0.64
PDLIM7-213ENST00000505074 TNFAIP2Q03169 654 aa19.04■□□□□ 0.64
PDLIM7-213ENST00000505074 ALYREFQ86V81 257 aaKnown RBP19.04■□□□□ 0.64
PDLIM7-213ENST00000505074 CPXCR1Q8N123 301 aa19.04■□□□□ 0.64
PDLIM7-213ENST00000505074 PRPF38AQ8NAV1 312 aaKnown RBP19.04■□□□□ 0.64
PDLIM7-213ENST00000505074 OTUD7AQ8TE49 926 aaPredicted RBP19.04■□□□□ 0.64
PDLIM7-213ENST00000505074 HLA-CQ95604 372 aa19.04■□□□□ 0.64
PDLIM7-213ENST00000505074 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.04■□□□□ 0.64
PDLIM7-213ENST00000505074 WNT8AQ9H1J5 351 aa19.04■□□□□ 0.64
PDLIM7-213ENST00000505074 CLIP2Q9UDT6 1046 aa19.04■□□□□ 0.64
PDLIM7-213ENST00000505074 TRANK1O15050 2925 aa19.03■□□□□ 0.64
PDLIM7-213ENST00000505074 ATP2A1O14983 1001 aa19.03■□□□□ 0.64
PDLIM7-213ENST00000505074 ZEB2O60315 1214 aa19.03■□□□□ 0.64
PDLIM7-213ENST00000505074 ZBED4O75132 1171 aa19.03■□□□□ 0.64
PDLIM7-213ENST00000505074 CA3P07451 260 aa19.03■□□□□ 0.64
PDLIM7-213ENST00000505074 PFKMP08237 780 aa19.03■□□□□ 0.64
PDLIM7-213ENST00000505074 MX1P20591 662 aa19.03■□□□□ 0.64
PDLIM7-213ENST00000505074 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.03■□□□□ 0.64
PDLIM7-213ENST00000505074 CCDC144CPQ8IYA2 1237 aa19.03■□□□□ 0.64
PDLIM7-213ENST00000505074 FGD4Q96M96 766 aa19.03■□□□□ 0.64
PDLIM7-213ENST00000505074 SEC62Q99442 399 aaKnown RBP19.03■□□□□ 0.64
PDLIM7-213ENST00000505074 TRPV6Q9H1D0 765 aa19.03■□□□□ 0.64
PDLIM7-213ENST00000505074 CERS4Q9HA82 394 aa19.03■□□□□ 0.64
PDLIM7-213ENST00000505074 C11orf16Q9NQ32 467 aa19.03■□□□□ 0.64
PDLIM7-213ENST00000505074 FBXO40Q9UH90 709 aa19.03■□□□□ 0.64
PDLIM7-213ENST00000505074 FAM86C2PA6NEL3 165 aa19.02■□□□□ 0.64
PDLIM7-213ENST00000505074 PATL2C9JE40 543 aaKnown RBP19.02■□□□□ 0.64
PDLIM7-213ENST00000505074 F5H6K3 240 aa19.02■□□□□ 0.64
PDLIM7-213ENST00000505074 B4GALT4O60513 344 aa19.02■□□□□ 0.64
PDLIM7-213ENST00000505074 KLRC3Q07444 240 aa19.02■□□□□ 0.64
PDLIM7-213ENST00000505074 IFNL3Q8IZI9 196 aa19.02■□□□□ 0.64
PDLIM7-213ENST00000505074 PI4K2BQ8TCG2 481 aa19.02■□□□□ 0.64
PDLIM7-213ENST00000505074 SCLYQ96I15 445 aa19.02■□□□□ 0.64
PDLIM7-213ENST00000505074 KATNBL1Q9H079 304 aa19.02■□□□□ 0.64
PDLIM7-213ENST00000505074 AP5M1Q9H0R1 490 aa19.02■□□□□ 0.64
PDLIM7-213ENST00000505074 NAPBQ9H115 298 aa19.02■□□□□ 0.64
PDLIM7-213ENST00000505074 NYAP2Q9P242 653 aa19.02■□□□□ 0.64
PDLIM7-213ENST00000505074 SCN5AQ14524 2016 aa19.01■□□□□ 0.63
PDLIM7-213ENST00000505074 NDUFB10O96000 172 aa19.01■□□□□ 0.63
PDLIM7-213ENST00000505074 SLC3A2P08195 630 aaKnown RBP19.01■□□□□ 0.63
PDLIM7-213ENST00000505074 TSPY3P0CV98 308 aa19.01■□□□□ 0.63
PDLIM7-213ENST00000505074 TSPY8P0CW00 308 aa19.01■□□□□ 0.63
PDLIM7-213ENST00000505074 PDE4BQ07343 736 aa19.01■□□□□ 0.63
PDLIM7-213ENST00000505074 FSCN1Q16658 493 aaKnown RBP19.01■□□□□ 0.63
PDLIM7-213ENST00000505074 TLK2Q86UE8 772 aa19.01■□□□□ 0.63
PDLIM7-213ENST00000505074 CHST13Q8NET6 341 aa19.01■□□□□ 0.63
PDLIM7-213ENST00000505074 KHSRPQ92945 711 aaKnown RBP eCLIP19.01■□□□□ 0.63
PDLIM7-213ENST00000505074 CRBNQ96SW2 442 aa19.01■□□□□ 0.63
PDLIM7-213ENST00000505074 RAVER2Q9HCJ3 691 aaKnown RBP19.01■□□□□ 0.63
PDLIM7-213ENST00000505074 ASTN1O14525 1302 aa19■□□□□ 0.63
PDLIM7-213ENST00000505074 GRIN2DO15399 1336 aa19■□□□□ 0.63
PDLIM7-213ENST00000505074 C11orf97A0A1B0GVM6 126 aaPredicted RBP19■□□□□ 0.63
PDLIM7-213ENST00000505074 PI4K2BG5E9Z4 385 aa19■□□□□ 0.63
PDLIM7-213ENST00000505074 ACTN1P12814 892 aa19■□□□□ 0.63
PDLIM7-213ENST00000505074 TTLL4Q14679 1199 aa19■□□□□ 0.63
PDLIM7-213ENST00000505074 ANKRD45Q5TZF3 282 aa19■□□□□ 0.63
PDLIM7-213ENST00000505074 KRT40Q6A162 431 aa19■□□□□ 0.63
PDLIM7-213ENST00000505074 LRRC47Q8N1G4 583 aaKnown RBP19■□□□□ 0.63
PDLIM7-213ENST00000505074 ARNTL2Q8WYA1 636 aa19■□□□□ 0.63
PDLIM7-213ENST00000505074 KIFC2Q96AC6 838 aa19■□□□□ 0.63
PDLIM7-213ENST00000505074 CEP95Q96GE4 821 aa19■□□□□ 0.63
PDLIM7-213ENST00000505074 AGBL1Q96MI9 1066 aa19■□□□□ 0.63
PDLIM7-213ENST00000505074 GNEQ9Y223 722 aaKnown RBP19■□□□□ 0.63
PDLIM7-213ENST00000505074 MUC6Q6W4X9 2439 aa19■□□□□ 0.63
PDLIM7-213ENST00000505074 EPOPA6NHQ4 379 aa18.99■□□□□ 0.63
PDLIM7-213ENST00000505074 VWCEQ96DN2 955 aa18.99■□□□□ 0.63
PDLIM7-213ENST00000505074 YTHDC1Q96MU7 727 aaKnown RBP18.99■□□□□ 0.63
PDLIM7-213ENST00000505074 SLC9A7Q96T83 725 aa18.99■□□□□ 0.63
PDLIM7-213ENST00000505074 PIEZO1Q92508 2521 aa18.98■□□□□ 0.63
PDLIM7-213ENST00000505074 DYNC1LI2O43237 492 aaPredicted RBP18.98■□□□□ 0.63
PDLIM7-213ENST00000505074 TTLL1O95922 423 aa18.98■□□□□ 0.63
PDLIM7-213ENST00000505074 SUPT20HL2P0C7V6 817 aa18.98■□□□□ 0.63
PDLIM7-213ENST00000505074 PPARAQ07869 468 aa18.98■□□□□ 0.63
PDLIM7-213ENST00000505074 IKQ13123 557 aaPredicted RBP18.98■□□□□ 0.63
PDLIM7-213ENST00000505074 ZMYM1Q5SVZ6 1142 aa18.98■□□□□ 0.63
PDLIM7-213ENST00000505074 DEFB128Q7Z7B8 93 aa18.98■□□□□ 0.63
PDLIM7-213ENST00000505074 PHOSPHO2Q8TCD6 241 aa18.98■□□□□ 0.63
PDLIM7-213ENST00000505074 CHMP4CQ96CF2 233 aa18.98■□□□□ 0.63
PDLIM7-213ENST00000505074 SLC38A10Q9HBR0 1119 aa18.98■□□□□ 0.63
PDLIM7-213ENST00000505074 IGKV6D-41A0A0C4DH26 115 aa18.97■□□□□ 0.63
PDLIM7-213ENST00000505074 ASB14A6NK59 587 aa18.97■□□□□ 0.63
PDLIM7-213ENST00000505074 KIF28PB7ZC32 967 aa18.97■□□□□ 0.63
PDLIM7-213ENST00000505074 OAZ1P54368 228 aa18.97■□□□□ 0.63
PDLIM7-213ENST00000505074 PSMC6P62333 389 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms