RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 NOB1Q9ULX3 412 aaKnown RBP7.3□□□□□ -1.24
GYPB-204ENST00000504951 MYH1P12882 1939 aa7.29□□□□□ -1.24
GYPB-204ENST00000504951 REV3LO60673 3130 aa7.29□□□□□ -1.24
GYPB-204ENST00000504951 TRIM6-TRIM34B2RNG4 842 aa7.29□□□□□ -1.24
GYPB-204ENST00000504951 LPXNO60711 386 aa7.29□□□□□ -1.24
GYPB-204ENST00000504951 PGK2P07205 417 aa7.29□□□□□ -1.24
GYPB-204ENST00000504951 SUPT20HL2P0C7V6 817 aa7.29□□□□□ -1.24
GYPB-204ENST00000504951 CYP7A1P22680 504 aa7.29□□□□□ -1.24
GYPB-204ENST00000504951 USP5P45974 858 aa7.29□□□□□ -1.24
GYPB-204ENST00000504951 G3BP1Q13283 466 aaKnown RBP eCLIP7.29□□□□□ -1.24
GYPB-204ENST00000504951 PLS1Q14651 629 aa7.29□□□□□ -1.24
GYPB-204ENST00000504951 LAPTM4AQ15012 233 aa7.29□□□□□ -1.24
GYPB-204ENST00000504951 LEXMQ3ZCV2 418 aa7.29□□□□□ -1.24
GYPB-204ENST00000504951 C6orf132Q5T0Z8 1188 aa7.29□□□□□ -1.24
GYPB-204ENST00000504951 OTOP2Q7RTS6 562 aa7.29□□□□□ -1.24
GYPB-204ENST00000504951 GJD3Q8N144 294 aa7.29□□□□□ -1.24
GYPB-204ENST00000504951 RIOK1Q9BRS2 568 aaKnown RBP7.29□□□□□ -1.24
GYPB-204ENST00000504951 KATNBL1Q9H079 304 aa7.29□□□□□ -1.24
GYPB-204ENST00000504951 ARHGEF10LQ9HCE6 1279 aa7.29□□□□□ -1.24
GYPB-204ENST00000504951 CD320Q9NPF0 282 aa7.29□□□□□ -1.24
GYPB-204ENST00000504951 TNNQ9UQP3 1299 aa7.29□□□□□ -1.24
GYPB-204ENST00000504951 MYO5AQ9Y4I1 1855 aaKnown RBP7.29□□□□□ -1.24
GYPB-204ENST00000504951 GRIN2DO15399 1336 aa7.28□□□□□ -1.24
GYPB-204ENST00000504951 TNKSO95271 1327 aa7.28□□□□□ -1.24
GYPB-204ENST00000504951 BRWD1Q9NSI6 2320 aa7.28□□□□□ -1.24
GYPB-204ENST00000504951 LRRC37A2A6NM11 1700 aa7.28□□□□□ -1.24
GYPB-204ENST00000504951 MYADML2A6NDP7 307 aa7.28□□□□□ -1.24
GYPB-204ENST00000504951 KIF28PB7ZC32 967 aa7.28□□□□□ -1.24
GYPB-204ENST00000504951 C6orf222P0C671 652 aaPredicted RBP7.28□□□□□ -1.24
GYPB-204ENST00000504951 RABGGTBP53611 331 aa7.28□□□□□ -1.24
GYPB-204ENST00000504951 DYNLL1P63167 89 aaKnown RBP7.28□□□□□ -1.24
GYPB-204ENST00000504951 TAP1Q03518 808 aa7.28□□□□□ -1.24
GYPB-204ENST00000504951 ITGA7Q13683 1181 aa7.28□□□□□ -1.24
GYPB-204ENST00000504951 SKIV2LQ15477 1246 aaKnown RBP7.28□□□□□ -1.24
GYPB-204ENST00000504951 PKN1Q16512 942 aa7.28□□□□□ -1.24
GYPB-204ENST00000504951 CCDC144BQ3MJ40 725 aa7.28□□□□□ -1.24
GYPB-204ENST00000504951 Q6ZNB5 142 aa7.28□□□□□ -1.24
GYPB-204ENST00000504951 PRRX2Q99811 253 aa7.28□□□□□ -1.24
GYPB-204ENST00000504951 TEX13BQ9BXU2 312 aa7.28□□□□□ -1.24
GYPB-204ENST00000504951 PPP1R12CQ9BZL4 782 aa7.28□□□□□ -1.24
GYPB-204ENST00000504951 KANSL2Q9H9L4 492 aa7.28□□□□□ -1.24
GYPB-204ENST00000504951 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.28□□□□□ -1.24
GYPB-204ENST00000504951 PRKAG3Q9UGI9 489 aa7.28□□□□□ -1.24
GYPB-204ENST00000504951 FBXO40Q9UH90 709 aa7.28□□□□□ -1.24
GYPB-204ENST00000504951 TSR3Q9UJK0 312 aaKnown RBP7.28□□□□□ -1.24
GYPB-204ENST00000504951 GNEQ9Y223 722 aaKnown RBP7.28□□□□□ -1.24
GYPB-204ENST00000504951 PARP14Q460N5 1801 aa7.27□□□□□ -1.25
GYPB-204ENST00000504951 ADCY6O43306 1168 aa7.27□□□□□ -1.25
GYPB-204ENST00000504951 ZEB2O60315 1214 aa7.27□□□□□ -1.25
GYPB-204ENST00000504951 BAIAP3O94812 1187 aa7.27□□□□□ -1.25
GYPB-204ENST00000504951 POLR3DP05423 398 aaPredicted RBP7.27□□□□□ -1.25
GYPB-204ENST00000504951 CA3P07451 260 aa7.27□□□□□ -1.25
GYPB-204ENST00000504951 FDX1P10109 184 aa7.27□□□□□ -1.25
GYPB-204ENST00000504951 ACTN1P12814 892 aa7.27□□□□□ -1.25
GYPB-204ENST00000504951 ZAP70P43403 619 aa7.27□□□□□ -1.25
GYPB-204ENST00000504951 OAZ1P54368 228 aa7.27□□□□□ -1.25
GYPB-204ENST00000504951 CAMK2BQ13554 666 aa7.27□□□□□ -1.25
GYPB-204ENST00000504951 COL19A1Q14993 1142 aa7.27□□□□□ -1.25
GYPB-204ENST00000504951 TNNI3KQ59H18 835 aa7.27□□□□□ -1.25
GYPB-204ENST00000504951 TTC39AQ5SRH9 613 aa7.27□□□□□ -1.25
GYPB-204ENST00000504951 IQSEC1Q6DN90 963 aa7.27□□□□□ -1.25
GYPB-204ENST00000504951 BMP8AQ7Z5Y6 402 aa7.27□□□□□ -1.25
GYPB-204ENST00000504951 CHST13Q8NET6 341 aa7.27□□□□□ -1.25
GYPB-204ENST00000504951 VTI1AQ96AJ9 217 aa7.27□□□□□ -1.25
GYPB-204ENST00000504951 DDX11Q96FC9 970 aa7.27□□□□□ -1.25
GYPB-204ENST00000504951 FGD4Q96M96 766 aa7.27□□□□□ -1.25
GYPB-204ENST00000504951 FBXL18Q96ME1 805 aa7.27□□□□□ -1.25
GYPB-204ENST00000504951 WNT8AQ9H1J5 351 aa7.27□□□□□ -1.25
GYPB-204ENST00000504951 PIH1D3Q9NQM4 214 aaKnown RBP7.27□□□□□ -1.25
GYPB-204ENST00000504951 SYNPO2Q9UMS6 1093 aa7.27□□□□□ -1.25
GYPB-204ENST00000504951 NOP58Q9Y2X3 529 aaKnown RBP7.27□□□□□ -1.25
GYPB-204ENST00000504951 FPGT-TNNI3KV9GXZ4 949 aa7.27□□□□□ -1.25
GYPB-204ENST00000504951 GBF1Q92538 1859 aa7.27□□□□□ -1.25
GYPB-204ENST00000504951 ZNF318Q5VUA4 2279 aa7.27□□□□□ -1.25
GYPB-204ENST00000504951 LOC102724159A0A0B4J2E5 919 aa7.26□□□□□ -1.25
GYPB-204ENST00000504951 GRXCR2A6NFK2 248 aa7.26□□□□□ -1.25
GYPB-204ENST00000504951 EPOPA6NHQ4 379 aa7.26□□□□□ -1.25
GYPB-204ENST00000504951 APBB1O00213 710 aa7.26□□□□□ -1.25
GYPB-204ENST00000504951 B4GALT4O60513 344 aa7.26□□□□□ -1.25
GYPB-204ENST00000504951 PARNO95453 639 aaKnown RBP7.26□□□□□ -1.25
GYPB-204ENST00000504951 GNAI2P04899 355 aa7.26□□□□□ -1.25
GYPB-204ENST00000504951 MYOGP15173 224 aa7.26□□□□□ -1.25
GYPB-204ENST00000504951 RARSP54136 660 aaKnown RBP7.26□□□□□ -1.25
GYPB-204ENST00000504951 ICA1Q05084 483 aa7.26□□□□□ -1.25
GYPB-204ENST00000504951 GRB10Q13322 594 aa7.26□□□□□ -1.25
GYPB-204ENST00000504951 PWP2Q15269 919 aaKnown RBP7.26□□□□□ -1.25
GYPB-204ENST00000504951 HERC6Q8IVU3 1022 aa7.26□□□□□ -1.25
GYPB-204ENST00000504951 PRPF38AQ8NAV1 312 aaKnown RBP7.26□□□□□ -1.25
GYPB-204ENST00000504951 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.26□□□□□ -1.25
GYPB-204ENST00000504951 NEK9Q8TD19 979 aa7.26□□□□□ -1.25
GYPB-204ENST00000504951 SSH3Q8TE77 659 aa7.26□□□□□ -1.25
GYPB-204ENST00000504951 LENG1Q96BZ8 264 aaPredicted RBP7.26□□□□□ -1.25
GYPB-204ENST00000504951 MFSD14AQ96MC6 490 aa7.26□□□□□ -1.25
GYPB-204ENST00000504951 DBNDD2Q9BQY9 259 aa7.26□□□□□ -1.25
GYPB-204ENST00000504951 CRNKL1Q9BZJ0 848 aaKnown RBP7.26□□□□□ -1.25
GYPB-204ENST00000504951 ALDH8A1Q9H2A2 487 aaPredicted RBP7.26□□□□□ -1.25
GYPB-204ENST00000504951 GOPCQ9HD26 462 aa7.26□□□□□ -1.25
GYPB-204ENST00000504951 DCP1AQ9NPI6 582 aaPredicted RBP7.26□□□□□ -1.25
GYPB-204ENST00000504951 SNRKQ9NRH2 765 aa7.26□□□□□ -1.25
GYPB-204ENST00000504951 ATP8A2Q9NTI2 1148 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms