RNA–Protein interactions for RNA: ENST00000504643.5

MATR3-210, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 2,560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-210ENST00000504643 FAM161BQ96MY7 647 aa9.18□□□□□ -0.94
MATR3-210ENST00000504643 SEC62Q99442 399 aaKnown RBP9.18□□□□□ -0.94
MATR3-210ENST00000504643 HOMER2Q9NSB8 354 aa9.18□□□□□ -0.94
MATR3-210ENST00000504643 CYP39A1Q9NYL5 469 aa9.18□□□□□ -0.94
MATR3-210ENST00000504643 MSRAQ9UJ68 235 aa9.18□□□□□ -0.94
MATR3-210ENST00000504643 CCPG1Q9ULG6 757 aa9.18□□□□□ -0.94
MATR3-210ENST00000504643 PRR12Q9ULL5 1215 aa9.18□□□□□ -0.94
MATR3-210ENST00000504643 GNEQ9Y223 722 aaKnown RBP9.18□□□□□ -0.94
MATR3-210ENST00000504643 PCDHB15Q9Y5E8 787 aa9.18□□□□□ -0.94
MATR3-210ENST00000504643 ZNF536O15090 1300 aa9.17□□□□□ -0.94
MATR3-210ENST00000504643 ITGB8P26012 769 aa9.17□□□□□ -0.94
MATR3-210ENST00000504643 TLK2Q86UE8 772 aa9.17□□□□□ -0.94
MATR3-210ENST00000504643 FAM126BQ8IXS8 530 aa9.17□□□□□ -0.94
MATR3-210ENST00000504643 FGD4Q96M96 766 aa9.17□□□□□ -0.94
MATR3-210ENST00000504643 KATNBL1Q9H079 304 aa9.17□□□□□ -0.94
MATR3-210ENST00000504643 IL23AQ9NPF7 189 aa9.17□□□□□ -0.94
MATR3-210ENST00000504643 RAD50Q92878 1312 aa9.17□□□□□ -0.94
MATR3-210ENST00000504643 LTBP2Q14767 1821 aa9.17□□□□□ -0.94
MATR3-210ENST00000504643 SOWAHBA6NEL2 793 aa9.17□□□□□ -0.94
MATR3-210ENST00000504643 CD4P01730 458 aa9.17□□□□□ -0.94
MATR3-210ENST00000504643 FGBP02675 491 aa9.17□□□□□ -0.94
MATR3-210ENST00000504643 PFKMP08237 780 aa9.17□□□□□ -0.94
MATR3-210ENST00000504643 CNTN2Q02246 1040 aa9.17□□□□□ -0.94
MATR3-210ENST00000504643 ITGA7Q13683 1181 aa9.17□□□□□ -0.94
MATR3-210ENST00000504643 CCDC96Q2M329 555 aa9.17□□□□□ -0.94
MATR3-210ENST00000504643 RGS22Q8NE09 1264 aa9.17□□□□□ -0.94
MATR3-210ENST00000504643 GAS2L1Q99501 681 aaPredicted RBP9.17□□□□□ -0.94
MATR3-210ENST00000504643 RANBP17Q9H2T7 1088 aaKnown RBP9.17□□□□□ -0.94
MATR3-210ENST00000504643 IL17RBQ9NRM6 502 aa9.17□□□□□ -0.94
MATR3-210ENST00000504643 TOMM22Q9NS69 142 aa9.17□□□□□ -0.94
MATR3-210ENST00000504643 COL11A1P12107 1806 aaPredicted RBP9.16□□□□□ -0.94
MATR3-210ENST00000504643 PLXNA1Q9UIW2 1896 aa9.16□□□□□ -0.94
MATR3-210ENST00000504643 DYNC1LI2O43237 492 aaPredicted RBP9.16□□□□□ -0.94
MATR3-210ENST00000504643 DNAJB2P25686 324 aa9.16□□□□□ -0.94
MATR3-210ENST00000504643 CPT1AP50416 773 aa9.16□□□□□ -0.94
MATR3-210ENST00000504643 DUSP28Q4G0W2 176 aa9.16□□□□□ -0.94
MATR3-210ENST00000504643 TMEM240Q5SV17 173 aa9.16□□□□□ -0.94
MATR3-210ENST00000504643 RASIP1Q5U651 963 aa9.16□□□□□ -0.94
MATR3-210ENST00000504643 SYDE2Q5VT97 1194 aa9.16□□□□□ -0.94
MATR3-210ENST00000504643 MFSD6Q6ZSS7 791 aa9.16□□□□□ -0.94
MATR3-210ENST00000504643 KCTD1Q719H9 257 aa9.16□□□□□ -0.94
MATR3-210ENST00000504643 DNERQ8NFT8 737 aa9.16□□□□□ -0.94
MATR3-210ENST00000504643 HERVK_113Q902F9 699 aa9.16□□□□□ -0.94
MATR3-210ENST00000504643 TIFAQ96CG3 184 aa9.16□□□□□ -0.94
MATR3-210ENST00000504643 ZNF576Q9H609 170 aa9.16□□□□□ -0.94
MATR3-210ENST00000504643 GPHNQ9NQX3 736 aaPredicted RBP9.16□□□□□ -0.94
MATR3-210ENST00000504643 SMCHD1A6NHR9 2005 aa9.16□□□□□ -0.94
MATR3-210ENST00000504643 HIP1O00291 1037 aa9.16□□□□□ -0.94
MATR3-210ENST00000504643 FGAP02671 866 aa9.16□□□□□ -0.94
MATR3-210ENST00000504643 PDE1AP54750 535 aa9.16□□□□□ -0.94
MATR3-210ENST00000504643 CTDSPL2Q05D32 466 aa9.16□□□□□ -0.94
MATR3-210ENST00000504643 GPATCH4Q5T3I0 446 aaKnown RBP9.16□□□□□ -0.94
MATR3-210ENST00000504643 NSMFQ6X4W1 530 aa9.16□□□□□ -0.94
MATR3-210ENST00000504643 KIAA1211Q6ZU35 1233 aa9.16□□□□□ -0.94
MATR3-210ENST00000504643 LENG1Q96BZ8 264 aaPredicted RBP9.16□□□□□ -0.94
MATR3-210ENST00000504643 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.16□□□□□ -0.945e-7■□□□□ 10.8
MATR3-210ENST00000504643 TTYH1Q9H313 450 aaPredicted RBP9.16□□□□□ -0.94
MATR3-210ENST00000504643 RWDD1Q9H446 243 aaPredicted RBP9.16□□□□□ -0.94
MATR3-210ENST00000504643 WDR19Q8NEZ3 1342 aa9.15□□□□□ -0.94
MATR3-210ENST00000504643 SALL3Q9BXA9 1300 aa9.15□□□□□ -0.94
MATR3-210ENST00000504643 MYADML2A6NDP7 307 aa9.15□□□□□ -0.94
MATR3-210ENST00000504643 EPHB4P54760 987 aa9.15□□□□□ -0.94
MATR3-210ENST00000504643 PTPN11Q06124 597 aaPredicted RBP9.15□□□□□ -0.94
MATR3-210ENST00000504643 AKNAD1Q5T1N1 836 aa9.15□□□□□ -0.94
MATR3-210ENST00000504643 TAPT1Q6NXT6 567 aa9.15□□□□□ -0.94
MATR3-210ENST00000504643 MYLIPQ8WY64 445 aa9.15□□□□□ -0.94
MATR3-210ENST00000504643 ESR2Q92731 530 aa9.15□□□□□ -0.94
MATR3-210ENST00000504643 COL25A1Q9BXS0 654 aaPredicted RBP9.15□□□□□ -0.94
MATR3-210ENST00000504643 HIPK3Q9H422 1215 aa9.15□□□□□ -0.94
MATR3-210ENST00000504643 RBM47A0AV96 593 aaKnown RBP9.15□□□□□ -0.95
MATR3-210ENST00000504643 CTAGE5O15320 804 aa9.15□□□□□ -0.95
MATR3-210ENST00000504643 SMPD1P17405 629 aa9.15□□□□□ -0.95
MATR3-210ENST00000504643 RRP1P56182 461 aaKnown RBP9.15□□□□□ -0.95
MATR3-210ENST00000504643 CXCL17Q6UXB2 119 aa9.15□□□□□ -0.95
MATR3-210ENST00000504643 DGKHQ86XP1 1220 aa9.15□□□□□ -0.95
MATR3-210ENST00000504643 SZT2Q5T011 3432 aa9.14□□□□□ -0.95
MATR3-210ENST00000504643 CSF2RAP15509 400 aa9.14□□□□□ -0.95
MATR3-210ENST00000504643 RFC2P35250 354 aa9.14□□□□□ -0.95
MATR3-210ENST00000504643 ZNF365Q70YC5 407 aa9.14□□□□□ -0.95
MATR3-210ENST00000504643 IQCA1Q86XH1 822 aa9.14□□□□□ -0.95
MATR3-210ENST00000504643 TMEM47Q9BQJ4 181 aa9.14□□□□□ -0.95
MATR3-210ENST00000504643 WDR11Q9BZH6 1224 aa9.14□□□□□ -0.95
MATR3-210ENST00000504643 TSPYL2Q9H2G4 693 aaPredicted RBP9.14□□□□□ -0.95
MATR3-210ENST00000504643 MYH4Q9Y623 1939 aa9.14□□□□□ -0.95
MATR3-210ENST00000504643 PTPDC1A2A3K4 754 aa9.14□□□□□ -0.95
MATR3-210ENST00000504643 HSPD1P10809 573 aaKnown RBP9.14□□□□□ -0.95
MATR3-210ENST00000504643 ACTN1P12814 892 aa9.14□□□□□ -0.95
MATR3-210ENST00000504643 ALDH5A1P51649 535 aaPredicted RBP9.14□□□□□ -0.95
MATR3-210ENST00000504643 BEX3Q00994 111 aa9.14□□□□□ -0.95
MATR3-210ENST00000504643 PDE4DQ08499 809 aa9.14□□□□□ -0.95
MATR3-210ENST00000504643 TRAF1Q13077 416 aa9.14□□□□□ -0.95
MATR3-210ENST00000504643 BAATQ14032 418 aaPredicted RBP9.14□□□□□ -0.95
MATR3-210ENST00000504643 MUM1L1Q5H9M0 696 aa9.14□□□□□ -0.95
MATR3-210ENST00000504643 RNF207Q6ZRF8 634 aa9.14□□□□□ -0.95
MATR3-210ENST00000504643 MCF2L2Q86YR7 1114 aa9.14□□□□□ -0.95
MATR3-210ENST00000504643 SCFD2Q8WU76 684 aa9.14□□□□□ -0.95
MATR3-210ENST00000504643 MTG1Q9BT17 334 aaPredicted RBP9.14□□□□□ -0.95
MATR3-210ENST00000504643 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.13□□□□□ -0.95
MATR3-210ENST00000504643 TRIM6-TRIM34B2RNG4 842 aa9.13□□□□□ -0.95
MATR3-210ENST00000504643 ZNF213O14771 459 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms