RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 RLBP1P12271 317 aa10.88□□□□□ -0.67
DHFR-202ENST00000504396 EEF2P13639 858 aaKnown RBP10.88□□□□□ -0.67
DHFR-202ENST00000504396 STAT3P40763 770 aa10.88□□□□□ -0.67
DHFR-202ENST00000504396 FAM83BQ5T0W9 1011 aa10.88□□□□□ -0.67
DHFR-202ENST00000504396 CCDC129Q6ZRS4 1044 aa10.88□□□□□ -0.67
DHFR-202ENST00000504396 RIOX2Q8IUF8 465 aa10.88□□□□□ -0.67
DHFR-202ENST00000504396 NUP133Q8WUM0 1156 aa10.88□□□□□ -0.67
DHFR-202ENST00000504396 CCDC17Q96LX7 622 aa10.88□□□□□ -0.67
DHFR-202ENST00000504396 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.88□□□□□ -0.67
DHFR-202ENST00000504396 SLC27A5Q9Y2P5 690 aa10.88□□□□□ -0.67
DHFR-202ENST00000504396 ROBO3Q96MS0 1386 aa10.88□□□□□ -0.67
DHFR-202ENST00000504396 SYNRGQ9UMZ2 1314 aa10.87□□□□□ -0.67
DHFR-202ENST00000504396 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.87□□□□□ -0.67
DHFR-202ENST00000504396 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.87□□□□□ -0.67
DHFR-202ENST00000504396 VWA5AO00534 786 aa10.87□□□□□ -0.67
DHFR-202ENST00000504396 KIAA0355O15063 1070 aa10.87□□□□□ -0.67
DHFR-202ENST00000504396 S1PR4O95977 384 aa10.87□□□□□ -0.67
DHFR-202ENST00000504396 COPB2P35606 906 aa10.87□□□□□ -0.67
DHFR-202ENST00000504396 CDK8P49336 464 aa10.87□□□□□ -0.67
DHFR-202ENST00000504396 GRIN2CQ14957 1233 aa10.87□□□□□ -0.67
DHFR-202ENST00000504396 SLFNL1Q499Z3 407 aa10.87□□□□□ -0.67
DHFR-202ENST00000504396 STK11IPQ8N1F8 1099 aa10.87□□□□□ -0.67
DHFR-202ENST00000504396 TIFAQ96CG3 184 aa10.87□□□□□ -0.67
DHFR-202ENST00000504396 DDX11Q96FC9 970 aa10.87□□□□□ -0.67
DHFR-202ENST00000504396 ATP8A2Q9NTI2 1148 aa10.87□□□□□ -0.67
DHFR-202ENST00000504396 PAG1Q9NWQ8 432 aa10.87□□□□□ -0.67
DHFR-202ENST00000504396 PPP1R9AQ9ULJ8 1098 aa10.87□□□□□ -0.67
DHFR-202ENST00000504396 DIS3Q9Y2L1 958 aaKnown RBP10.87□□□□□ -0.67
DHFR-202ENST00000504396 MYH7P12883 1935 aa10.87□□□□□ -0.67
DHFR-202ENST00000504396 SMCHD1A6NHR9 2005 aa10.87□□□□□ -0.67
DHFR-202ENST00000504396 TCRBV5S4A2TA0A5A2 114 aa10.86□□□□□ -0.67
DHFR-202ENST00000504396 USP17L12C9JPN9 530 aa10.86□□□□□ -0.67
DHFR-202ENST00000504396 USP17L21D6R901 530 aa10.86□□□□□ -0.67
DHFR-202ENST00000504396 KDM4AO75164 1064 aa10.86□□□□□ -0.67
DHFR-202ENST00000504396 C6orf222P0C671 652 aaPredicted RBP10.86□□□□□ -0.67
DHFR-202ENST00000504396 ZNF865P0CJ78 1059 aaPredicted RBP10.86□□□□□ -0.67
DHFR-202ENST00000504396 ACLYP53396 1101 aa10.86□□□□□ -0.67
DHFR-202ENST00000504396 FAAP100Q0VG06 881 aa10.86□□□□□ -0.67
DHFR-202ENST00000504396 AMHR2Q16671 573 aa10.86□□□□□ -0.67
DHFR-202ENST00000504396 ZNF792Q3KQV3 632 aa10.86□□□□□ -0.67
DHFR-202ENST00000504396 SNRNP48Q6IEG0 339 aaKnown RBP10.86□□□□□ -0.67
DHFR-202ENST00000504396 CCDC174Q6PII3 467 aa10.86□□□□□ -0.67
DHFR-202ENST00000504396 SIAH1Q8IUQ4 282 aa10.86□□□□□ -0.67
DHFR-202ENST00000504396 USP38Q8NB14 1042 aa10.86□□□□□ -0.67
DHFR-202ENST00000504396 KIF1BPQ96EK5 621 aa10.86□□□□□ -0.67
DHFR-202ENST00000504396 GLT1D1Q96MS3 346 aa10.86□□□□□ -0.67
DHFR-202ENST00000504396 GAS2L1Q99501 681 aaPredicted RBP10.86□□□□□ -0.67
DHFR-202ENST00000504396 NUP88Q99567 741 aaPredicted RBP10.86□□□□□ -0.67
DHFR-202ENST00000504396 SPSB2Q99619 263 aa10.86□□□□□ -0.67
DHFR-202ENST00000504396 BOLA2Q9H3K6 86 aa10.86□□□□□ -0.67
DHFR-202ENST00000504396 ZNF576Q9H609 170 aa10.86□□□□□ -0.67
DHFR-202ENST00000504396 KANSL2Q9H9L4 492 aa10.86□□□□□ -0.67
DHFR-202ENST00000504396 FAM184BQ9ULE4 1060 aa10.86□□□□□ -0.67
DHFR-202ENST00000504396 ISY1Q9ULR0 285 aaKnown RBP10.86□□□□□ -0.67
DHFR-202ENST00000504396 SLC4A4Q9Y6R1 1079 aa10.86□□□□□ -0.67
DHFR-202ENST00000504396 MROH7Q68CQ1 1323 aa10.86□□□□□ -0.67
DHFR-202ENST00000504396 MOXD2PA6NHM9 499 aa10.85□□□□□ -0.67
DHFR-202ENST00000504396 RNF223E7ERA6 249 aa10.85□□□□□ -0.67
DHFR-202ENST00000504396 SMIM22K7EJ46 135 aa10.85□□□□□ -0.67
DHFR-202ENST00000504396 ADAMTS4O75173 837 aa10.85□□□□□ -0.67
DHFR-202ENST00000504396 MS4A1P11836 297 aa10.85□□□□□ -0.67
DHFR-202ENST00000504396 ADD2P35612 726 aa10.85□□□□□ -0.67
DHFR-202ENST00000504396 PPIGQ13427 754 aaKnown RBP eCLIP10.85□□□□□ -0.67
DHFR-202ENST00000504396 KCNA10Q16322 511 aa10.85□□□□□ -0.67
DHFR-202ENST00000504396 C12orf60Q5U649 245 aa10.85□□□□□ -0.67
DHFR-202ENST00000504396 C16orf86Q6ZW13 317 aa10.85□□□□□ -0.67
DHFR-202ENST00000504396 CPXCR1Q8N123 301 aa10.85□□□□□ -0.67
DHFR-202ENST00000504396 PANK1Q8TE04 598 aa10.85□□□□□ -0.67
DHFR-202ENST00000504396 SLF1Q9BQI6 1058 aa10.85□□□□□ -0.67
DHFR-202ENST00000504396 TSEN34Q9BSV6 310 aaKnown RBP10.85□□□□□ -0.67
DHFR-202ENST00000504396 TEX13BQ9BXU2 312 aa10.85□□□□□ -0.67
DHFR-202ENST00000504396 PPP1R12CQ9BZL4 782 aa10.85□□□□□ -0.67
DHFR-202ENST00000504396 PRKD2Q9BZL6 878 aa10.85□□□□□ -0.67
DHFR-202ENST00000504396 SPC25Q9HBM1 224 aa10.85□□□□□ -0.67
DHFR-202ENST00000504396 ADAMTS5Q9UNA0 930 aa10.85□□□□□ -0.67
DHFR-202ENST00000504396 VCANP13611 3396 aa10.85□□□□□ -0.67
DHFR-202ENST00000504396 CDH23Q9H251 3354 aa10.85□□□□□ -0.67
DHFR-202ENST00000504396 MYADML2A6NDP7 307 aa10.84□□□□□ -0.67
DHFR-202ENST00000504396 TNFRSF10AO00220 468 aa10.84□□□□□ -0.67
DHFR-202ENST00000504396 TRIM66O15016 1216 aa10.84□□□□□ -0.67
DHFR-202ENST00000504396 HMMRO75330 724 aa10.84□□□□□ -0.67
DHFR-202ENST00000504396 TIMP1P01033 207 aa10.84□□□□□ -0.67
DHFR-202ENST00000504396 HNRNPUQ00839 825 aaKnown RBP eCLIP10.84□□□□□ -0.676e-6■■■■□ 19.8
DHFR-202ENST00000504396 ANKRD33Q7Z3H0 272 aa10.84□□□□□ -0.67
DHFR-202ENST00000504396 MSL3Q8N5Y2 521 aaKnown RBP10.84□□□□□ -0.67
DHFR-202ENST00000504396 IL27Q8NEV9 243 aa10.84□□□□□ -0.67
DHFR-202ENST00000504396 TOX2Q96NM4 488 aa10.84□□□□□ -0.67
DHFR-202ENST00000504396 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.84□□□□□ -0.672e-6■■■□□ 15
DHFR-202ENST00000504396 ZNF214Q9UL59 606 aaPredicted RBP10.84□□□□□ -0.67
DHFR-202ENST00000504396 PRUNE2Q8WUY3 3088 aa10.84□□□□□ -0.67
DHFR-202ENST00000504396 GRXCR1A8MXD5 290 aa10.84□□□□□ -0.67
DHFR-202ENST00000504396 TLR3O15455 904 aaKnown RBP10.84□□□□□ -0.67
DHFR-202ENST00000504396 IGFBP4P22692 258 aa10.84□□□□□ -0.67
DHFR-202ENST00000504396 SSTR3P32745 418 aaPredicted RBP10.84□□□□□ -0.67
DHFR-202ENST00000504396 NOL8Q76FK4 1167 aaKnown RBP10.84□□□□□ -0.67
DHFR-202ENST00000504396 RPAP2Q8IXW5 612 aaPredicted RBP10.84□□□□□ -0.67
DHFR-202ENST00000504396 ANKRD35Q8N283 1001 aa10.84□□□□□ -0.67
DHFR-202ENST00000504396 TMEM199Q8N511 208 aa10.84□□□□□ -0.67
DHFR-202ENST00000504396 PCSK9Q8NBP7 692 aaKnown RBP10.84□□□□□ -0.67
DHFR-202ENST00000504396 KIFC2Q96AC6 838 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms