RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 ADAM9Q13443 819 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 POMGNT1Q8WZA1 660 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 AP5M1Q9H0R1 490 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 VCXQ9H320 206 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 ARMCX3Q9UH62 379 aaPredicted RBP7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 LRFN2Q9ULH4 789 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 PCDHA4Q9UN74 947 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 ERBB4Q15303 1308 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 WDR17Q8IZU2 1322 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 PCP11498 1178 aaKnown RBP7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 GSPT1P15170 499 aaKnown RBP7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 PHKA1P46020 1223 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 ASPRV1Q53RT3 343 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 KAZNQ674X7 775 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 NXNQ6DKJ4 435 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 SLC17A8Q8NDX2 589 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 TRIM58Q8NG06 486 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 CLIC4Q9Y696 253 aa7.87□□□□□ -1.15
SYNPO2-205ENST00000504178 A6NJR5 290 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 PTPROQ16827 1216 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 LRCH2Q5VUJ6 765 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 ZNF772Q68DY9 489 aaPredicted RBP7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 C4orf50Q6ZRC1 276 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 RSPH3Q86UC2 560 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 CLIC6Q96NY7 704 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 LMBRD1Q9NUN5 540 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 RTEL1Q9NZ71 1219 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 FEZ2Q9UHY8 353 aaPredicted RBP7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 HYOU1Q9Y4L1 999 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 PCDHB4Q9Y5E5 795 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 TTLL1O95922 423 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 FGAP02671 866 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 ARMC9Q7Z3E5 817 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 RFX6Q8HWS3 928 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 ZSWIM6Q9HCJ5 1215 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 SHROOM2Q13796 1616 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 ARHGEF5Q12774 1597 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 A6NNZ2 444 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 PFDN6O15212 129 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 FMNL1O95466 1100 aaPredicted RBP7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 RXRBP28702 533 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 LTKP29376 864 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 ZNF445P59923 1031 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 SEPT6Q14141 434 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 TUBB8Q3ZCM7 444 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 LMNTD2Q8IXW0 634 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 C10orf67Q8IYJ2 551 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 SPICE1Q8N0Z3 855 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 PPM1KQ8N3J5 372 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 EAF2Q96CJ1 260 aaPredicted RBP7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 USP44Q9H0E7 712 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 KIF9Q9HAQ2 790 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 DISC1Q9NRI5 854 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 PCDHA1Q9Y5I3 950 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 SAR1BQ9Y6B6 198 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 GDF11O95390 407 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 SERPINB2P05120 415 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 PCK1P35558 622 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 MFAP3P55082 362 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 WHAMMP3Q1A5X7 153 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 METTL23Q86XA0 190 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 CEP120Q8N960 986 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 RETREG2Q8NC44 543 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 PUS3Q9BZE2 481 aaKnown RBP7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 DBNDD1Q9H9R9 158 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 KIAA1468Q9P260 1216 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 IPO11Q9UI26 975 aaKnown RBP7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 SYNMO15061 1565 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 UGGT1Q9NYU2 1555 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 PLEKHG1Q9ULL1 1385 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 TSPOAP1O95153 1857 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 RGS16O15492 202 aaPredicted RBP7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 FOSP01100 380 aaPredicted RBP7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 S100BP04271 92 aaPredicted RBP7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 DYNLL1P63167 89 aaKnown RBP7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 UBE3CQ15386 1083 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 POTEDQ86YR6 584 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 PI4K2BQ8TCG2 481 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 METTL14Q9HCE5 456 aaKnown RBP7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 KIAA1024Q9UPX6 916 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 NOC2LQ9Y3T9 749 aaKnown RBP7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 TTC36A6NLP5 189 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 TROVE2P10155 538 aaKnown RBP eCLIP7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 ATF2P15336 505 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 STX2P32856 288 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 CTNNA1P35221 906 aaKnown RBP7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 GARSP41250 739 aaKnown RBP7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 SF3A3Q12874 501 aaKnown RBP eCLIP7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 ARHGEF6Q15052 776 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 RPS6KA2Q15349 733 aa7.86□□□□□ -1.15
SYNPO2-205ENST00000504178 KIF1BO60333 1816 aa7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 THAP12O43422 761 aa7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 IFNB1P01574 187 aa7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 ADD1P35611 737 aaKnown RBP7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 CYP4A11Q02928 519 aa7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 MUM1L1Q5H9M0 696 aa7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 ABI1Q8IZP0 508 aa7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 CCDC127Q96BQ5 260 aa7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 AMNQ9BXJ7 453 aa7.85□□□□□ -1.15
SYNPO2-205ENST00000504178 GOLGA8CPA6NN73 597 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms