RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 ZNF384Q8TF68 577 aa4.51□□□□□ -1.69
USP46-205ENST00000504078 TRIM43Q96BQ3 446 aaPredicted RBP4.51□□□□□ -1.69
USP46-205ENST00000504078 UHRF1Q96T88 793 aaPredicted RBP4.51□□□□□ -1.69
USP46-205ENST00000504078 GAS2L1Q99501 681 aaPredicted RBP4.51□□□□□ -1.69
USP46-205ENST00000504078 P2RX7Q99572 595 aaKnown RBP4.51□□□□□ -1.69
USP46-205ENST00000504078 FEZ1Q99689 392 aa4.51□□□□□ -1.69
USP46-205ENST00000504078 NUCKS1Q9H1E3 243 aaKnown RBP4.51□□□□□ -1.69
USP46-205ENST00000504078 PRDM12Q9H4Q4 367 aa4.51□□□□□ -1.69
USP46-205ENST00000504078 TMOD4Q9NZQ9 345 aa4.51□□□□□ -1.69
USP46-205ENST00000504078 THEGQ9P2T0 379 aa4.51□□□□□ -1.69
USP46-205ENST00000504078 MORF4L1Q9UBU8 362 aa4.51□□□□□ -1.69
USP46-205ENST00000504078 DDX20Q9UHI6 824 aaKnown RBP4.51□□□□□ -1.69
USP46-205ENST00000504078 PHF24Q9UPV7 400 aa4.51□□□□□ -1.69
USP46-205ENST00000504078 SUGT1Q9Y2Z0 365 aa4.51□□□□□ -1.69
USP46-205ENST00000504078 GPSM3Q9Y4H4 160 aa4.51□□□□□ -1.69
USP46-205ENST00000504078 LRRC37A2A6NM11 1700 aa4.51□□□□□ -1.69
USP46-205ENST00000504078 GBF1Q92538 1859 aa4.51□□□□□ -1.69
USP46-205ENST00000504078 COL4A4P53420 1690 aaPredicted RBP4.51□□□□□ -1.69
USP46-205ENST00000504078 NAV1Q8NEY1 1877 aa4.5□□□□□ -1.69
USP46-205ENST00000504078 PLXNA1Q9UIW2 1896 aa4.5□□□□□ -1.69
USP46-205ENST00000504078 USP17L5A8MUK1 530 aa4.5□□□□□ -1.69
USP46-205ENST00000504078 KBTBD13C9JR72 458 aa4.5□□□□□ -1.69
USP46-205ENST00000504078 EYA2O00167 538 aa4.5□□□□□ -1.69
USP46-205ENST00000504078 APBB1O00213 710 aa4.5□□□□□ -1.69
USP46-205ENST00000504078 DNM1LO00429 736 aa4.5□□□□□ -1.69
USP46-205ENST00000504078 TRIM66O15016 1216 aa4.5□□□□□ -1.69
USP46-205ENST00000504078 CNMDO75829 334 aa4.5□□□□□ -1.69
USP46-205ENST00000504078 ALDH1L1O75891 902 aa4.5□□□□□ -1.69
USP46-205ENST00000504078 IGFBP4P22692 258 aa4.5□□□□□ -1.69
USP46-205ENST00000504078 CAP2P40123 477 aa4.5□□□□□ -1.69
USP46-205ENST00000504078 ADCYAP1R1P41586 468 aa4.5□□□□□ -1.69
USP46-205ENST00000504078 RFX5P48382 616 aaPredicted RBP4.5□□□□□ -1.69
USP46-205ENST00000504078 KCNQ1P51787 676 aa4.5□□□□□ -1.69
USP46-205ENST00000504078 MECOMQ03112 1051 aa4.5□□□□□ -1.69
USP46-205ENST00000504078 TFF2Q03403 129 aa4.5□□□□□ -1.69
USP46-205ENST00000504078 PABPC4Q13310 644 aaKnown RBP eCLIP4.5□□□□□ -1.69
USP46-205ENST00000504078 FOXD4L6Q3SYB3 417 aaPredicted RBP4.5□□□□□ -1.69
USP46-205ENST00000504078 PRAMEF19Q5SWL8 479 aa4.5□□□□□ -1.69
USP46-205ENST00000504078 MFSD14CQ5VZR4 134 aa4.5□□□□□ -1.69
USP46-205ENST00000504078 FOXD4L3Q6VB84 417 aaPredicted RBP4.5□□□□□ -1.69
USP46-205ENST00000504078 CCDC129Q6ZRS4 1044 aa4.5□□□□□ -1.69
USP46-205ENST00000504078 TBC1D9Q6ZT07 1266 aa4.5□□□□□ -1.69
USP46-205ENST00000504078 ATG9AQ7Z3C6 839 aa4.5□□□□□ -1.69
USP46-205ENST00000504078 MAPKAPK5Q8IW41 473 aa4.5□□□□□ -1.69
USP46-205ENST00000504078 TEX11Q8IYF3 940 aa4.5□□□□□ -1.69
USP46-205ENST00000504078 IL27Q8NEV9 243 aa4.5□□□□□ -1.69
USP46-205ENST00000504078 GPRC5AQ8NFJ5 357 aa4.5□□□□□ -1.69
USP46-205ENST00000504078 SH3RF3Q8TEJ3 882 aaPredicted RBP4.5□□□□□ -1.69
USP46-205ENST00000504078 LPIN2Q92539 896 aa4.5□□□□□ -1.69
USP46-205ENST00000504078 IDI2Q9BXS1 227 aa4.5□□□□□ -1.69
USP46-205ENST00000504078 KRTAP4-7Q9BYR0 210 aa4.5□□□□□ -1.69
USP46-205ENST00000504078 OSBPL5Q9H0X9 879 aaPredicted RBP4.5□□□□□ -1.69
USP46-205ENST00000504078 PRKRIP1Q9H875 184 aaPredicted RBP4.5□□□□□ -1.69
USP46-205ENST00000504078 TMPRSS4Q9NRS4 437 aa4.5□□□□□ -1.69
USP46-205ENST00000504078 RBPJLQ9UBG7 517 aa4.5□□□□□ -1.69
USP46-205ENST00000504078 ZBTB21Q9ULJ3 1066 aa4.5□□□□□ -1.69
USP46-205ENST00000504078 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.5□□□□□ -1.69
USP46-205ENST00000504078 TCF20Q9UGU0 1960 aaKnown RBP4.5□□□□□ -1.69
USP46-205ENST00000504078 FOCADQ5VW36 1801 aa4.5□□□□□ -1.69
USP46-205ENST00000504078 ZNF236Q9UL36 1845 aa4.5□□□□□ -1.69
USP46-205ENST00000504078 KIF16BQ96L93 1317 aa4.49□□□□□ -1.69
USP46-205ENST00000504078 CACNA1FO60840 1977 aa4.49□□□□□ -1.69
USP46-205ENST00000504078 PGK1P00558 417 aa4.49□□□□□ -1.69
USP46-205ENST00000504078 F11P03951 625 aa4.49□□□□□ -1.69
USP46-205ENST00000504078 ACRP10323 421 aa4.49□□□□□ -1.69
USP46-205ENST00000504078 CYBAP13498 195 aa4.49□□□□□ -1.69
USP46-205ENST00000504078 MAPK4P31152 587 aa4.49□□□□□ -1.69
USP46-205ENST00000504078 SMAD3P84022 425 aaKnown RBP4.49□□□□□ -1.69
USP46-205ENST00000504078 ATP2B2Q01814 1243 aa4.49□□□□□ -1.69
USP46-205ENST00000504078 TLE2Q04725 743 aa4.49□□□□□ -1.69
USP46-205ENST00000504078 ADGRE1Q14246 886 aa4.49□□□□□ -1.69
USP46-205ENST00000504078 SKIV2LQ15477 1246 aaKnown RBP4.49□□□□□ -1.69
USP46-205ENST00000504078 RSPO4Q2I0M5 234 aaPredicted RBP4.49□□□□□ -1.69
USP46-205ENST00000504078 CCDC27Q2M243 656 aa4.49□□□□□ -1.69
USP46-205ENST00000504078 NKAPLQ5M9Q1 402 aa4.49□□□□□ -1.69
USP46-205ENST00000504078 CCDC102BQ68D86 513 aa4.49□□□□□ -1.69
USP46-205ENST00000504078 SLC39A5Q6ZMH5 540 aa4.49□□□□□ -1.69
USP46-205ENST00000504078 CLEC10AQ8IUN9 316 aa4.49□□□□□ -1.69
USP46-205ENST00000504078 CRACR2BQ8N4Y2 399 aaPredicted RBP4.49□□□□□ -1.69
USP46-205ENST00000504078 ADAM32Q8TC27 787 aa4.49□□□□□ -1.69
USP46-205ENST00000504078 LPAR1Q92633 364 aa4.49□□□□□ -1.69
USP46-205ENST00000504078 USP6NLQ92738 828 aa4.49□□□□□ -1.69
USP46-205ENST00000504078 TIFAQ96CG3 184 aa4.49□□□□□ -1.69
USP46-205ENST00000504078 BTBD6Q96KE9 485 aa4.49□□□□□ -1.69
USP46-205ENST00000504078 TRIM34Q9BYJ4 488 aa4.49□□□□□ -1.69
USP46-205ENST00000504078 PPP1R12CQ9BZL4 782 aa4.49□□□□□ -1.69
USP46-205ENST00000504078 NKX2-4Q9H2Z4 354 aa4.49□□□□□ -1.69
USP46-205ENST00000504078 ZNF576Q9H609 170 aa4.49□□□□□ -1.69
USP46-205ENST00000504078 AS3MTQ9HBK9 375 aa4.49□□□□□ -1.69
USP46-205ENST00000504078 AATFQ9NY61 560 aaKnown RBP eCLIP4.49□□□□□ -1.69
USP46-205ENST00000504078 RAI14Q9P0K7 980 aa4.49□□□□□ -1.69
USP46-205ENST00000504078 BTBD7Q9P203 1132 aa4.49□□□□□ -1.69
USP46-205ENST00000504078 DENND2AQ9ULE3 1009 aa4.49□□□□□ -1.69
USP46-205ENST00000504078 MYO5AQ9Y4I1 1855 aaKnown RBP4.49□□□□□ -1.69
USP46-205ENST00000504078 UTYO14607 1347 aa4.48□□□□□ -1.69
USP46-205ENST00000504078 FLT1P17948 1338 aa4.48□□□□□ -1.69
USP46-205ENST00000504078 SALL1Q9NSC2 1324 aa4.48□□□□□ -1.69
USP46-205ENST00000504078 GH2P01242 217 aa4.48□□□□□ -1.69
USP46-205ENST00000504078 CLTBP09497 229 aa4.48□□□□□ -1.69
USP46-205ENST00000504078 XRCC5P13010 732 aaKnown RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms