RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 KAT6BQ8WYB5 2073 aa16.74■□□□□ 0.27
SNF8-203ENST00000504000 RASSF10A6NK89 507 aa16.74■□□□□ 0.27
SNF8-203ENST00000504000 VAV2P52735 878 aa16.74■□□□□ 0.27
SNF8-203ENST00000504000 HSPA2P54652 639 aa16.74■□□□□ 0.27
SNF8-203ENST00000504000 AMPD3Q01432 767 aa16.74■□□□□ 0.27
SNF8-203ENST00000504000 TBC1D8BQ0IIM8 1120 aa16.74■□□□□ 0.27
SNF8-203ENST00000504000 FOXR2Q6PJQ5 311 aa16.74■□□□□ 0.27
SNF8-203ENST00000504000 SRLQ86TD4 932 aa16.74■□□□□ 0.27
SNF8-203ENST00000504000 SMARCC1Q92922 1105 aaPredicted RBP16.74■□□□□ 0.27
SNF8-203ENST00000504000 TRIM9Q9C026 710 aa16.74■□□□□ 0.27
SNF8-203ENST00000504000 ZMYND12Q9H0C1 365 aa16.74■□□□□ 0.27
SNF8-203ENST00000504000 ROBO1Q9Y6N7 1651 aa16.74■□□□□ 0.27
SNF8-203ENST00000504000 FLT1P17948 1338 aa16.74■□□□□ 0.27
SNF8-203ENST00000504000 NUTM2BA6NNL0 878 aaPredicted RBP16.73■□□□□ 0.27
SNF8-203ENST00000504000 NUTM2EB1AL46 878 aaPredicted RBP16.73■□□□□ 0.27
SNF8-203ENST00000504000 STXBP3O00186 592 aa16.73■□□□□ 0.27
SNF8-203ENST00000504000 PRPF6O94906 941 aaKnown RBP16.73■□□□□ 0.27
SNF8-203ENST00000504000 SMARCA1P28370 1054 aa16.73■□□□□ 0.27
SNF8-203ENST00000504000 TFAP4Q01664 338 aa16.73■□□□□ 0.27
SNF8-203ENST00000504000 TYW1BQ6NUM6 668 aa16.73■□□□□ 0.27
SNF8-203ENST00000504000 TRIM58Q8NG06 486 aa16.73■□□□□ 0.27
SNF8-203ENST00000504000 RASSF8Q8NHQ8 419 aa16.73■□□□□ 0.27
SNF8-203ENST00000504000 PLAGL2Q9UPG8 496 aa16.73■□□□□ 0.27
SNF8-203ENST00000504000 CCDC88AQ3V6T2 1871 aa16.73■□□□□ 0.27
SNF8-203ENST00000504000 PALM3A6NDB9 673 aaPredicted RBP16.73■□□□□ 0.27
SNF8-203ENST00000504000 WTIPA6NIX2 430 aaPredicted RBP16.73■□□□□ 0.27
SNF8-203ENST00000504000 B4DLN1 442 aa16.73■□□□□ 0.27
SNF8-203ENST00000504000 LCA5LO95447 670 aa16.73■□□□□ 0.27
SNF8-203ENST00000504000 SYF2O95926 243 aaKnown RBP16.73■□□□□ 0.27
SNF8-203ENST00000504000 KIF5AQ12840 1032 aa16.73■□□□□ 0.27
SNF8-203ENST00000504000 ARHGAP27Q6ZUM4 889 aa16.73■□□□□ 0.27
SNF8-203ENST00000504000 C3orf67Q6ZVT6 689 aa16.73■□□□□ 0.27
SNF8-203ENST00000504000 KRT25Q7Z3Z0 450 aa16.73■□□□□ 0.27
SNF8-203ENST00000504000 GOLGA6L1Q8N7Z2 621 aa16.73■□□□□ 0.27
SNF8-203ENST00000504000 MCM9Q9NXL9 1143 aa16.73■□□□□ 0.27
SNF8-203ENST00000504000 HPCAL4Q9UM19 191 aa16.73■□□□□ 0.27
SNF8-203ENST00000504000 JRKLQ9Y4A0 524 aa16.73■□□□□ 0.27
SNF8-203ENST00000504000 COL5A3P25940 1745 aaPredicted RBP16.73■□□□□ 0.27
SNF8-203ENST00000504000 ZC3H4Q9UPT8 1303 aaKnown RBP16.72■□□□□ 0.27
SNF8-203ENST00000504000 MYO1CO00159 1063 aa16.72■□□□□ 0.27
SNF8-203ENST00000504000 ENC1O14682 589 aa16.72■□□□□ 0.27
SNF8-203ENST00000504000 CYP2D6P10635 497 aa16.72■□□□□ 0.27
SNF8-203ENST00000504000 RPS8P62241 208 aaKnown RBP16.72■□□□□ 0.27
SNF8-203ENST00000504000 EVX2Q03828 476 aa16.72■□□□□ 0.27
SNF8-203ENST00000504000 MIIPQ5JXC2 388 aa16.72■□□□□ 0.27
SNF8-203ENST00000504000 CCDC70Q6NSX1 233 aa16.72■□□□□ 0.27
SNF8-203ENST00000504000 CNNM4Q6P4Q7 775 aa16.72■□□□□ 0.27
SNF8-203ENST00000504000 CCNI2Q6ZMN8 369 aaPredicted RBP16.72■□□□□ 0.27
SNF8-203ENST00000504000 CABP7Q86V35 215 aa16.72■□□□□ 0.27
SNF8-203ENST00000504000 STAG2Q8N3U4 1231 aa16.72■□□□□ 0.27
SNF8-203ENST00000504000 MMGT1Q8N4V1 131 aa16.72■□□□□ 0.27
SNF8-203ENST00000504000 CELF1Q92879 486 aaKnown RBP16.72■□□□□ 0.27
SNF8-203ENST00000504000 GPKOWQ92917 476 aaPredicted RBP eCLIP16.72■□□□□ 0.27
SNF8-203ENST00000504000 CNOT6LQ96LI5 555 aaKnown RBP16.72■□□□□ 0.27
SNF8-203ENST00000504000 SPZ1Q9BXG8 430 aa16.72■□□□□ 0.27
SNF8-203ENST00000504000 AGPAT5Q9NUQ2 364 aa16.72■□□□□ 0.27
SNF8-203ENST00000504000 HDAC6Q9UBN7 1215 aa16.72■□□□□ 0.27
SNF8-203ENST00000504000 COL16A1Q07092 1604 aaPredicted RBP16.72■□□□□ 0.27
SNF8-203ENST00000504000 CASZ1Q86V15 1759 aa16.71■□□□□ 0.27
SNF8-203ENST00000504000 OR52Z1P0C646 297 aa16.71■□□□□ 0.27
SNF8-203ENST00000504000 SF3B2Q13435 895 aaKnown RBP16.71■□□□□ 0.27
SNF8-203ENST00000504000 DDB1Q16531 1140 aa16.71■□□□□ 0.27
SNF8-203ENST00000504000 INF2Q27J81 1249 aa16.71■□□□□ 0.27
SNF8-203ENST00000504000 FKBP15Q5T1M5 1219 aa16.71■□□□□ 0.27
SNF8-203ENST00000504000 CENPPQ6IPU0 288 aa16.71■□□□□ 0.27
SNF8-203ENST00000504000 AMOTL1Q8IY63 956 aa16.71■□□□□ 0.27
SNF8-203ENST00000504000 LACRTQ9GZZ8 138 aa16.71■□□□□ 0.27
SNF8-203ENST00000504000 RASSF4Q9H2L5 321 aa16.71■□□□□ 0.27
SNF8-203ENST00000504000 FAM204AQ9H8W3 233 aa16.71■□□□□ 0.27
SNF8-203ENST00000504000 STRCQ7RTU9 1775 aa16.71■□□□□ 0.27
SNF8-203ENST00000504000 PP2D1A8MPX8 630 aa16.71■□□□□ 0.27
SNF8-203ENST00000504000 PES1O00541 588 aaKnown RBP16.71■□□□□ 0.27
SNF8-203ENST00000504000 CYTH3O43739 400 aa16.71■□□□□ 0.27
SNF8-203ENST00000504000 USO1O60763 962 aaKnown RBP16.71■□□□□ 0.27
SNF8-203ENST00000504000 RNF40O75150 1001 aa16.71■□□□□ 0.27
SNF8-203ENST00000504000 PLCG1P19174 1290 aa16.71■□□□□ 0.27
SNF8-203ENST00000504000 PRDX5P30044 214 aa16.71■□□□□ 0.27
SNF8-203ENST00000504000 PPP4CP60510 307 aa16.71■□□□□ 0.27
SNF8-203ENST00000504000 PDE4DQ08499 809 aa16.71■□□□□ 0.27
SNF8-203ENST00000504000 ANKRD40Q6AI12 368 aa16.71■□□□□ 0.27
SNF8-203ENST00000504000 CERS3Q8IU89 383 aa16.71■□□□□ 0.27
SNF8-203ENST00000504000 RASGRP4Q8TDF6 673 aa16.71■□□□□ 0.27
SNF8-203ENST00000504000 LRRC15Q8TF66 581 aa16.71■□□□□ 0.27
SNF8-203ENST00000504000 SECISBP2LQ93073 1101 aaKnown RBP16.71■□□□□ 0.27
SNF8-203ENST00000504000 BAZ2BQ9UIF8 2168 aaKnown RBP16.71■□□□□ 0.26
SNF8-203ENST00000504000 RCCD1A6NED2 376 aa16.7■□□□□ 0.26
SNF8-203ENST00000504000 GNA11P29992 359 aa16.7■□□□□ 0.26
SNF8-203ENST00000504000 SPA17Q15506 151 aa16.7■□□□□ 0.26
SNF8-203ENST00000504000 CCDC84Q86UT8 332 aaPredicted RBP16.7■□□□□ 0.26
SNF8-203ENST00000504000 AFAP1L1Q8TED9 768 aa16.7■□□□□ 0.26
SNF8-203ENST00000504000 CCDC42Q96M95 316 aa16.7■□□□□ 0.26
SNF8-203ENST00000504000 NOC4LQ9BVI4 516 aaKnown RBP16.7■□□□□ 0.26
SNF8-203ENST00000504000 EDEM3Q9BZQ6 932 aa16.7■□□□□ 0.26
SNF8-203ENST00000504000 NYXQ9GZU5 481 aa16.7■□□□□ 0.26
SNF8-203ENST00000504000 SNX12Q9UMY4 172 aa16.7■□□□□ 0.26
SNF8-203ENST00000504000 RRP15Q9Y3B9 282 aaKnown RBP16.7■□□□□ 0.26
SNF8-203ENST00000504000 IRS2Q9Y4H2 1338 aa16.7■□□□□ 0.26
SNF8-203ENST00000504000 PVALEFA0A1B0GWK0 134 aa16.69■□□□□ 0.26
SNF8-203ENST00000504000 FGFR1OPO95684 399 aaKnown RBP16.69■□□□□ 0.26
SNF8-203ENST00000504000 IDEP14735 1019 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms