RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 VTI1AQ96AJ9 217 aa14.05□□□□□ -0.16
MED28-203ENST00000503945 DSCC1Q9BVC3 393 aa14.05□□□□□ -0.16
MED28-203ENST00000503945 TTYH1Q9H313 450 aaPredicted RBP14.05□□□□□ -0.16
MED28-203ENST00000503945 CLTBP09497 229 aa14.04□□□□□ -0.16
MED28-203ENST00000503945 IRX6P78412 446 aaPredicted RBP14.04□□□□□ -0.16
MED28-203ENST00000503945 SMAD3P84022 425 aaKnown RBP14.04□□□□□ -0.16
MED28-203ENST00000503945 SYDE2Q5VT97 1194 aa14.04□□□□□ -0.16
MED28-203ENST00000503945 NOL8Q76FK4 1167 aaKnown RBP14.04□□□□□ -0.16
MED28-203ENST00000503945 FAM133AQ8N9E0 248 aa14.04□□□□□ -0.16
MED28-203ENST00000503945 PCSK9Q8NBP7 692 aaKnown RBP14.04□□□□□ -0.16
MED28-203ENST00000503945 RUFY2Q8WXA3 655 aa14.04□□□□□ -0.16
MED28-203ENST00000503945 MYLIPQ8WY64 445 aa14.04□□□□□ -0.16
MED28-203ENST00000503945 ZKSCAN3Q9BRR0 538 aa14.04□□□□□ -0.16
MED28-203ENST00000503945 A1CFQ9NQ94 594 aaKnown RBP14.04□□□□□ -0.16
MED28-203ENST00000503945 FRMPD2Q68DX3 1309 aaPredicted RBP14.04□□□□□ -0.16
MED28-203ENST00000503945 A0A1W2PQ45 241 aaPredicted RBP14.03□□□□□ -0.16
MED28-203ENST00000503945 A0A1W2PQY0 241 aa14.03□□□□□ -0.16
MED28-203ENST00000503945 KIAA0355O15063 1070 aa14.03□□□□□ -0.16
MED28-203ENST00000503945 KDM4AO75164 1064 aa14.03□□□□□ -0.16
MED28-203ENST00000503945 PDHBP11177 359 aa14.03□□□□□ -0.16
MED28-203ENST00000503945 ACLYP53396 1101 aa14.03□□□□□ -0.16
MED28-203ENST00000503945 KCNA10Q16322 511 aa14.03□□□□□ -0.16
MED28-203ENST00000503945 GNASQ5JWF2 1037 aa14.03□□□□□ -0.16
MED28-203ENST00000503945 NSMFQ6X4W1 530 aa14.03□□□□□ -0.16
MED28-203ENST00000503945 TBC1D10CQ8IV04 446 aa14.03□□□□□ -0.16
MED28-203ENST00000503945 MAFAQ8NHW3 353 aaPredicted RBP14.03□□□□□ -0.16
MED28-203ENST00000503945 LENG1Q96BZ8 264 aaPredicted RBP14.03□□□□□ -0.16
MED28-203ENST00000503945 KRT23Q9C075 422 aa14.03□□□□□ -0.16
MED28-203ENST00000503945 RANBP17Q9H2T7 1088 aaKnown RBP14.03□□□□□ -0.16
MED28-203ENST00000503945 ZSWIM5Q9P217 1185 aa14.03□□□□□ -0.16
MED28-203ENST00000503945 MCM3APO60318 1980 aa14.02□□□□□ -0.16
MED28-203ENST00000503945 SOWAHBA6NEL2 793 aa14.02□□□□□ -0.17
MED28-203ENST00000503945 MOXD2PA6NHM9 499 aa14.02□□□□□ -0.17
MED28-203ENST00000503945 PQBP1O60828 265 aaKnown RBP14.02□□□□□ -0.17
MED28-203ENST00000503945 ADAMTS4O75173 837 aa14.02□□□□□ -0.17
MED28-203ENST00000503945 C6orf222P0C671 652 aaPredicted RBP14.02□□□□□ -0.17
MED28-203ENST00000503945 TNFAIP2Q03169 654 aa14.02□□□□□ -0.17
MED28-203ENST00000503945 ZNF543Q08ER8 600 aa14.02□□□□□ -0.17
MED28-203ENST00000503945 MUM1L1Q5H9M0 696 aa14.02□□□□□ -0.17
MED28-203ENST00000503945 GPATCH4Q5T3I0 446 aaKnown RBP14.02□□□□□ -0.17
MED28-203ENST00000503945 TTC22Q5TAA0 569 aa14.02□□□□□ -0.17
MED28-203ENST00000503945 IQSEC1Q6DN90 963 aa14.02□□□□□ -0.17
MED28-203ENST00000503945 KLHDC9Q8NEP7 349 aa14.02□□□□□ -0.17
MED28-203ENST00000503945 ANKS1AQ92625 1134 aa14.02□□□□□ -0.17
MED28-203ENST00000503945 GLT1D1Q96MS3 346 aa14.02□□□□□ -0.17
MED28-203ENST00000503945 ZSCAN10Q96SZ4 725 aaPredicted RBP14.02□□□□□ -0.17
MED28-203ENST00000503945 KAT14Q9H8E8 782 aa14.02□□□□□ -0.17
MED28-203ENST00000503945 CNNM2Q9H8M5 875 aa14.02□□□□□ -0.17
MED28-203ENST00000503945 STARD7Q9NQZ5 370 aa14.02□□□□□ -0.17
MED28-203ENST00000503945 TMEM39AQ9NV64 488 aa14.02□□□□□ -0.17
MED28-203ENST00000503945 CYP39A1Q9NYL5 469 aa14.02□□□□□ -0.17
MED28-203ENST00000503945 ADD3Q9UEY8 706 aaKnown RBP14.02□□□□□ -0.17
MED28-203ENST00000503945 GREB1LQ9C091 1923 aaPredicted RBP14.02□□□□□ -0.17
MED28-203ENST00000503945 MYH4Q9Y623 1939 aa14.02□□□□□ -0.17
MED28-203ENST00000503945 DCDC2CA8MYV0 355 aa14.01□□□□□ -0.17
MED28-203ENST00000503945 B4E1Z4 1266 aa14.01□□□□□ -0.17
MED28-203ENST00000503945 RAG1P15918 1043 aa14.01□□□□□ -0.17
MED28-203ENST00000503945 PDE4AP27815 886 aa14.01□□□□□ -0.17
MED28-203ENST00000503945 GJA9P57773 515 aa14.01□□□□□ -0.17
MED28-203ENST00000503945 IRX5P78411 483 aaPredicted RBP14.01□□□□□ -0.17
MED28-203ENST00000503945 FAAP100Q0VG06 881 aa14.01□□□□□ -0.17
MED28-203ENST00000503945 BAATQ14032 418 aaPredicted RBP14.01□□□□□ -0.17
MED28-203ENST00000503945 RASGRP2Q7LDG7 609 aa14.01□□□□□ -0.17
MED28-203ENST00000503945 RNPC3Q96LT9 517 aaKnown RBP14.01□□□□□ -0.17
MED28-203ENST00000503945 FGD4Q96M96 766 aa14.01□□□□□ -0.17
MED28-203ENST00000503945 TOX2Q96NM4 488 aa14.01□□□□□ -0.17
MED28-203ENST00000503945 ELP1O95163 1332 aa14□□□□□ -0.17
MED28-203ENST00000503945 SYNRGQ9UMZ2 1314 aa14□□□□□ -0.17
MED28-203ENST00000503945 PTPDC1A2A3K4 754 aa14□□□□□ -0.17
MED28-203ENST00000503945 SNHG28P0DPA3 235 aa14□□□□□ -0.17
MED28-203ENST00000503945 TRDNQ13061 729 aa14□□□□□ -0.17
MED28-203ENST00000503945 CCSAPQ6IQ19 270 aaPredicted RBP14□□□□□ -0.17
MED28-203ENST00000503945 ANKRD33Q7Z3H0 272 aa14□□□□□ -0.17
MED28-203ENST00000503945 PNMA1Q8ND90 353 aa14□□□□□ -0.17
MED28-203ENST00000503945 MPHOSPH6Q99547 160 aaKnown RBP14□□□□□ -0.17
MED28-203ENST00000503945 UBAC1Q9BSL1 405 aa14□□□□□ -0.17
MED28-203ENST00000503945 UBA5Q9GZZ9 404 aa14□□□□□ -0.17
MED28-203ENST00000503945 AP5M1Q9H0R1 490 aa14□□□□□ -0.17
MED28-203ENST00000503945 EYSQ5T1H1 3165 aa14□□□□□ -0.17
MED28-203ENST00000503945 NEDD4P46934 1319 aa13.99□□□□□ -0.17
MED28-203ENST00000503945 MYADML2A6NDP7 307 aa13.99□□□□□ -0.17
MED28-203ENST00000503945 B4DLN1 442 aa13.99□□□□□ -0.17
MED28-203ENST00000503945 DYNC1LI2O43237 492 aaPredicted RBP13.99□□□□□ -0.17
MED28-203ENST00000503945 ZEB2O60315 1214 aa13.99□□□□□ -0.17
MED28-203ENST00000503945 ASGR1P07306 291 aa13.99□□□□□ -0.17
MED28-203ENST00000503945 GOLGA8HP0CJ92 632 aa13.99□□□□□ -0.17
MED28-203ENST00000503945 CST5P28325 142 aaPredicted RBP13.99□□□□□ -0.17
MED28-203ENST00000503945 MRPL12P52815 198 aaKnown RBP13.99□□□□□ -0.17
MED28-203ENST00000503945 FPGSQ05932 587 aa13.99□□□□□ -0.17
MED28-203ENST00000503945 RNF207Q6ZRF8 634 aa13.99□□□□□ -0.17
MED28-203ENST00000503945 KIAA1211Q6ZU35 1233 aa13.99□□□□□ -0.17
MED28-203ENST00000503945 EEPD1Q7L9B9 569 aa13.99□□□□□ -0.17
MED28-203ENST00000503945 U3KPZ7 1027 aaPredicted RBP13.99□□□□□ -0.17
MED28-203ENST00000503945 MYO9BQ13459 2157 aa13.99□□□□□ -0.17
MED28-203ENST00000503945 PRUNE2Q8WUY3 3088 aa13.98□□□□□ -0.17
MED28-203ENST00000503945 LOC102724159A0A0B4J2E5 919 aa13.98□□□□□ -0.17
MED28-203ENST00000503945 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.98□□□□□ -0.17
MED28-203ENST00000503945 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.98□□□□□ -0.17
MED28-203ENST00000503945 PARP1P09874 1014 aaKnown RBP13.98□□□□□ -0.17
MED28-203ENST00000503945 FOSL2P15408 326 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms