RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 ALDH8A1Q9H2A2 487 aaPredicted RBP18.97■□□□□ 0.63
PDLIM7-210ENST00000503827 NYAP2Q9P242 653 aa18.97■□□□□ 0.63
PDLIM7-210ENST00000503827 COL4A4P53420 1690 aaPredicted RBP18.97■□□□□ 0.63
PDLIM7-210ENST00000503827 PRR33A8MZF0 331 aa18.96■□□□□ 0.63
PDLIM7-210ENST00000503827 ADD2P35612 726 aa18.96■□□□□ 0.63
PDLIM7-210ENST00000503827 GRB10Q13322 594 aa18.96■□□□□ 0.63
PDLIM7-210ENST00000503827 FAM133AQ8N9E0 248 aa18.96■□□□□ 0.63
PDLIM7-210ENST00000503827 IL1RAPL2Q9NP60 686 aa18.96■□□□□ 0.63
PDLIM7-210ENST00000503827 HOMER2Q9NSB8 354 aa18.96■□□□□ 0.63
PDLIM7-210ENST00000503827 FEM1BQ9UK73 627 aa18.96■□□□□ 0.63
PDLIM7-210ENST00000503827 Q9Y3F1 56 aa18.96■□□□□ 0.63
PDLIM7-210ENST00000503827 SMPD1P17405 629 aa18.95■□□□□ 0.62
PDLIM7-210ENST00000503827 IQSEC1Q6DN90 963 aa18.95■□□□□ 0.62
PDLIM7-210ENST00000503827 CTR9Q6PD62 1173 aa18.95■□□□□ 0.62
PDLIM7-210ENST00000503827 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.95■□□□□ 0.624e-11■■■□□ 18.5
PDLIM7-210ENST00000503827 ACAD9Q9H845 621 aa18.95■□□□□ 0.62
PDLIM7-210ENST00000503827 SLC4A4Q9Y6R1 1079 aa18.95■□□□□ 0.62
PDLIM7-210ENST00000503827 CYP2C9P11712 490 aa18.94■□□□□ 0.62
PDLIM7-210ENST00000503827 RFC2P35250 354 aa18.94■□□□□ 0.62
PDLIM7-210ENST00000503827 SLFNL1Q499Z3 407 aa18.94■□□□□ 0.62
PDLIM7-210ENST00000503827 HSP90AB4PQ58FF6 505 aa18.94■□□□□ 0.62
PDLIM7-210ENST00000503827 HERC6Q8IVU3 1022 aa18.94■□□□□ 0.62
PDLIM7-210ENST00000503827 CD320Q9NPF0 282 aa18.94■□□□□ 0.62
PDLIM7-210ENST00000503827 TRMT13Q9NUP7 481 aaKnown RBP18.94■□□□□ 0.62
PDLIM7-210ENST00000503827 CLIP2Q9UDT6 1046 aa18.94■□□□□ 0.62
PDLIM7-210ENST00000503827 COG6Q9Y2V7 657 aa18.94■□□□□ 0.62
PDLIM7-210ENST00000503827 TANC1Q9C0D5 1861 aa18.94■□□□□ 0.62
PDLIM7-210ENST00000503827 TNKSO95271 1327 aa18.94■□□□□ 0.62
PDLIM7-210ENST00000503827 ZBED9Q6R2W3 1325 aa18.94■□□□□ 0.62
PDLIM7-210ENST00000503827 SOWAHBA6NEL2 793 aa18.93■□□□□ 0.62
PDLIM7-210ENST00000503827 FDX1P10109 184 aa18.93■□□□□ 0.62
PDLIM7-210ENST00000503827 MRE11P49959 708 aa18.93■□□□□ 0.62
PDLIM7-210ENST00000503827 CLASRPQ8N2M8 674 aaKnown RBP18.93■□□□□ 0.62
PDLIM7-210ENST00000503827 RHPN1Q8TCX5 695 aa18.93■□□□□ 0.62
PDLIM7-210ENST00000503827 MKNK2Q9HBH9 465 aa18.93■□□□□ 0.62
PDLIM7-210ENST00000503827 PAG1Q9NWQ8 432 aa18.93■□□□□ 0.62
PDLIM7-210ENST00000503827 LMCD1Q9NZU5 365 aa18.93■□□□□ 0.62
PDLIM7-210ENST00000503827 ARPP21Q9UBL0 812 aaPredicted RBP18.93■□□□□ 0.62
PDLIM7-210ENST00000503827 ARHGEF15O94989 841 aa18.92■□□□□ 0.62
PDLIM7-210ENST00000503827 RASA1P20936 1047 aa18.92■□□□□ 0.62
PDLIM7-210ENST00000503827 PTGS1P23219 599 aa18.92■□□□□ 0.62
PDLIM7-210ENST00000503827 CEP85Q6P2H3 762 aa18.92■□□□□ 0.62
PDLIM7-210ENST00000503827 ITPRIPQ8IWB1 547 aa18.92■□□□□ 0.62
PDLIM7-210ENST00000503827 FTOQ9C0B1 505 aaKnown RBP eCLIP18.92■□□□□ 0.62
PDLIM7-210ENST00000503827 A1CFQ9NQ94 594 aaKnown RBP18.92■□□□□ 0.62
PDLIM7-210ENST00000503827 PDGFCQ9NRA1 345 aa18.92■□□□□ 0.62
PDLIM7-210ENST00000503827 POLR3EQ9NVU0 708 aa18.92■□□□□ 0.62
PDLIM7-210ENST00000503827 PTPRSQ13332 1948 aa18.92■□□□□ 0.62
PDLIM7-210ENST00000503827 LPXNO60711 386 aa18.91■□□□□ 0.62
PDLIM7-210ENST00000503827 IFIT2P09913 472 aaKnown RBP18.91■□□□□ 0.62
PDLIM7-210ENST00000503827 CSPP1Q1MSJ5 1256 aa18.91■□□□□ 0.62
PDLIM7-210ENST00000503827 TAPT1Q6NXT6 567 aa18.91■□□□□ 0.62
PDLIM7-210ENST00000503827 EEPD1Q7L9B9 569 aa18.91■□□□□ 0.62
PDLIM7-210ENST00000503827 FTSJ3Q8IY81 847 aaKnown RBP18.91■□□□□ 0.62
PDLIM7-210ENST00000503827 GJD3Q8N144 294 aa18.91■□□□□ 0.62
PDLIM7-210ENST00000503827 RETREG2Q8NC44 543 aa18.91■□□□□ 0.62
PDLIM7-210ENST00000503827 UIMC1Q96RL1 719 aa18.91■□□□□ 0.62
PDLIM7-210ENST00000503827 RNF146Q9NTX7 359 aa18.91■□□□□ 0.62
PDLIM7-210ENST00000503827 BRWD1Q9NSI6 2320 aa18.9■□□□□ 0.62
PDLIM7-210ENST00000503827 ALADP13716 330 aa18.9■□□□□ 0.62
PDLIM7-210ENST00000503827 UBE3CQ15386 1083 aa18.9■□□□□ 0.62
PDLIM7-210ENST00000503827 KIAA1211Q6ZU35 1233 aa18.9■□□□□ 0.62
PDLIM7-210ENST00000503827 FBXO16Q8IX29 292 aaPredicted RBP18.9■□□□□ 0.62
PDLIM7-210ENST00000503827 STK11IPQ8N1F8 1099 aa18.9■□□□□ 0.62
PDLIM7-210ENST00000503827 TET1Q8NFU7 2136 aa18.89■□□□□ 0.62
PDLIM7-210ENST00000503827 PITPNM1O00562 1244 aa18.89■□□□□ 0.61
PDLIM7-210ENST00000503827 BAIAP3O94812 1187 aa18.89■□□□□ 0.61
PDLIM7-210ENST00000503827 IQCF3P0C7M6 154 aa18.89■□□□□ 0.61
PDLIM7-210ENST00000503827 BMP3P12645 472 aa18.89■□□□□ 0.61
PDLIM7-210ENST00000503827 SSTR3P32745 418 aaPredicted RBP18.89■□□□□ 0.61
PDLIM7-210ENST00000503827 KCNJ6P48051 423 aa18.89■□□□□ 0.61
PDLIM7-210ENST00000503827 TKFCQ3LXA3 575 aa18.89■□□□□ 0.61
PDLIM7-210ENST00000503827 FAM178BQ8IXR5 827 aa18.89■□□□□ 0.61
PDLIM7-210ENST00000503827 RPAP2Q8IXW5 612 aaPredicted RBP18.89■□□□□ 0.61
PDLIM7-210ENST00000503827 MKL1Q969V6 931 aa18.89■□□□□ 0.61
PDLIM7-210ENST00000503827 BOLA2Q9H3K6 86 aa18.89■□□□□ 0.61
PDLIM7-210ENST00000503827 UBE2ZQ9H832 354 aaPredicted RBP18.89■□□□□ 0.61
PDLIM7-210ENST00000503827 VTA1Q9NP79 307 aa18.89■□□□□ 0.61
PDLIM7-210ENST00000503827 GPHNQ9NQX3 736 aaPredicted RBP18.89■□□□□ 0.61
PDLIM7-210ENST00000503827 SYNPO2Q9UMS6 1093 aa18.89■□□□□ 0.61
PDLIM7-210ENST00000503827 TRIP12Q14669 1992 aaPredicted RBP18.89■□□□□ 0.61
PDLIM7-210ENST00000503827 CPT1AP50416 773 aa18.88■□□□□ 0.61
PDLIM7-210ENST00000503827 SBK1Q52WX2 424 aa18.88■□□□□ 0.61
PDLIM7-210ENST00000503827 FAM47CQ5HY64 1035 aa18.88■□□□□ 0.61
PDLIM7-210ENST00000503827 TMEM63BQ5T3F8 832 aa18.88■□□□□ 0.61
PDLIM7-210ENST00000503827 GMCL1P1Q8NEA9 526 aa18.88■□□□□ 0.61
PDLIM7-210ENST00000503827 GDPD5Q8WTR4 605 aa18.88■□□□□ 0.61
PDLIM7-210ENST00000503827 KIF1BPQ96EK5 621 aa18.88■□□□□ 0.61
PDLIM7-210ENST00000503827 TRERF1Q96PN7 1200 aa18.88■□□□□ 0.61
PDLIM7-210ENST00000503827 ISY1Q9ULR0 285 aaKnown RBP18.88■□□□□ 0.61
PDLIM7-210ENST00000503827 DDX49Q9Y6V7 483 aaKnown RBP18.88■□□□□ 0.61
PDLIM7-210ENST00000503827 SCN10AQ9Y5Y9 1956 aa18.88■□□□□ 0.61
PDLIM7-210ENST00000503827 IGKV6D-41A0A0C4DH26 115 aa18.87■□□□□ 0.61
PDLIM7-210ENST00000503827 MINDY4BA8MYZ0 360 aa18.87■□□□□ 0.61
PDLIM7-210ENST00000503827 MYL3P08590 195 aa18.87■□□□□ 0.61
PDLIM7-210ENST00000503827 LCTP09848 1927 aa18.87■□□□□ 0.61
PDLIM7-210ENST00000503827 ALAS1P13196 640 aa18.87■□□□□ 0.61
PDLIM7-210ENST00000503827 SIP14410 1827 aa18.87■□□□□ 0.61
PDLIM7-210ENST00000503827 STAT2P52630 851 aa18.87■□□□□ 0.61
PDLIM7-210ENST00000503827 PURAQ00577 322 aaKnown RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms