RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 ENOX1Q8TC92 643 aaKnown RBP24.16■■□□□ 1.46
UBE2D3-216ENST00000503742 JDP2Q8WYK2 163 aa24.16■■□□□ 1.46
UBE2D3-216ENST00000503742 XPO4Q9C0E2 1151 aaKnown RBP24.16■■□□□ 1.46
UBE2D3-216ENST00000503742 VEZTQ9HBM0 779 aa24.16■■□□□ 1.46
UBE2D3-216ENST00000503742 IFNKQ9P0W0 207 aa24.16■■□□□ 1.46
UBE2D3-216ENST00000503742 ATP1A3P13637 1013 aa24.15■■□□□ 1.46
UBE2D3-216ENST00000503742 FANCCQ00597 558 aa24.15■■□□□ 1.46
UBE2D3-216ENST00000503742 CDC37Q16543 378 aaPredicted RBP24.15■■□□□ 1.46
UBE2D3-216ENST00000503742 MTMR9Q96QG7 549 aa24.15■■□□□ 1.46
UBE2D3-216ENST00000503742 SGIP1Q9BQI5 828 aa24.15■■□□□ 1.46
UBE2D3-216ENST00000503742 WNT10BO00744 389 aa24.14■■□□□ 1.46
UBE2D3-216ENST00000503742 ERCC5P28715 1186 aaPredicted RBP24.14■■□□□ 1.46
UBE2D3-216ENST00000503742 UBE2SQ16763 222 aa24.14■■□□□ 1.46
UBE2D3-216ENST00000503742 BTNL9Q6UXG8 535 aa24.14■■□□□ 1.46
UBE2D3-216ENST00000503742 POTEDQ86YR6 584 aa24.14■■□□□ 1.46
UBE2D3-216ENST00000503742 STAMQ92783 540 aa24.14■■□□□ 1.46
UBE2D3-216ENST00000503742 MED15Q96RN5 788 aa24.14■■□□□ 1.46
UBE2D3-216ENST00000503742 GLT8D2Q9H1C3 349 aa24.14■■□□□ 1.46
UBE2D3-216ENST00000503742 PSTPIP2Q9H939 334 aa24.14■■□□□ 1.46
UBE2D3-216ENST00000503742 FANCLQ9NW38 375 aa24.14■■□□□ 1.46
UBE2D3-216ENST00000503742 OFD1O75665 1012 aa24.14■■□□□ 1.45
UBE2D3-216ENST00000503742 UBA7P41226 1012 aa24.14■■□□□ 1.45
UBE2D3-216ENST00000503742 STAT6P42226 847 aa24.14■■□□□ 1.45
UBE2D3-216ENST00000503742 KIAA1524Q8TCG1 905 aa24.14■■□□□ 1.45
UBE2D3-216ENST00000503742 NUP88Q99567 741 aaPredicted RBP24.14■■□□□ 1.45
UBE2D3-216ENST00000503742 TMEM39BQ9GZU3 492 aa24.14■■□□□ 1.45
UBE2D3-216ENST00000503742 PYCARDQ9ULZ3 195 aa24.14■■□□□ 1.45
UBE2D3-216ENST00000503742 BMP3P12645 472 aa24.13■■□□□ 1.45
UBE2D3-216ENST00000503742 MMP14P50281 582 aa24.13■■□□□ 1.45
UBE2D3-216ENST00000503742 CDAN1Q8IWY9 1227 aa24.13■■□□□ 1.45
UBE2D3-216ENST00000503742 PCDHA1Q9Y5I3 950 aa24.13■■□□□ 1.45
UBE2D3-216ENST00000503742 CD2APQ9Y5K6 639 aa24.13■■□□□ 1.45
UBE2D3-216ENST00000503742 CUL4BQ13620 913 aa24.12■■□□□ 1.45
UBE2D3-216ENST00000503742 TNIP1Q15025 636 aa24.12■■□□□ 1.45
UBE2D3-216ENST00000503742 NBPF9Q3BBW0 867 aa24.12■■□□□ 1.45
UBE2D3-216ENST00000503742 RRAGBQ5VZM2 374 aa24.12■■□□□ 1.45
UBE2D3-216ENST00000503742 IGSF22Q8N9C0 903 aa24.12■■□□□ 1.45
UBE2D3-216ENST00000503742 MYOZ2Q9NPC6 264 aa24.12■■□□□ 1.45
UBE2D3-216ENST00000503742 ZBTB21Q9ULJ3 1066 aa24.12■■□□□ 1.45
UBE2D3-216ENST00000503742 MYH7BA7E2Y1 1941 aa24.12■■□□□ 1.45
UBE2D3-216ENST00000503742 TNNI2P48788 182 aa24.12■■□□□ 1.45
UBE2D3-216ENST00000503742 MAP3K10Q02779 954 aa24.12■■□□□ 1.45
UBE2D3-216ENST00000503742 SYDE2Q5VT97 1194 aa24.12■■□□□ 1.45
UBE2D3-216ENST00000503742 PPP4R3AQ6IN85 833 aa24.12■■□□□ 1.45
UBE2D3-216ENST00000503742 CACTINQ8WUQ7 758 aaKnown RBP24.12■■□□□ 1.45
UBE2D3-216ENST00000503742 BLZF1Q9H2G9 400 aa24.12■■□□□ 1.45
UBE2D3-216ENST00000503742 ARHGEF10LQ9HCE6 1279 aa24.12■■□□□ 1.45
UBE2D3-216ENST00000503742 TMX2Q9Y320 296 aa24.12■■□□□ 1.45
UBE2D3-216ENST00000503742 TMEM232C9JQI7 657 aa24.11■■□□□ 1.45
UBE2D3-216ENST00000503742 SLC37A4O43826 429 aa24.11■■□□□ 1.45
UBE2D3-216ENST00000503742 TDP2O95551 362 aa24.11■■□□□ 1.45
UBE2D3-216ENST00000503742 ZNF18P17022 549 aa24.11■■□□□ 1.45
UBE2D3-216ENST00000503742 ZNF280AP59817 542 aaPredicted RBP24.11■■□□□ 1.45
UBE2D3-216ENST00000503742 LRMPQ12912 555 aa24.11■■□□□ 1.45
UBE2D3-216ENST00000503742 IMPACTQ9P2X3 320 aa24.11■■□□□ 1.45
UBE2D3-216ENST00000503742 LTBP3Q9NS15 1303 aa24.11■■□□□ 1.45
UBE2D3-216ENST00000503742 SHTN1A0MZ66 631 aa24.11■■□□□ 1.45
UBE2D3-216ENST00000503742 CD44P16070 742 aaKnown RBP24.11■■□□□ 1.45
UBE2D3-216ENST00000503742 ECE1P42892 770 aa24.11■■□□□ 1.45
UBE2D3-216ENST00000503742 R3HDM1Q15032 1099 aaKnown RBP24.11■■□□□ 1.45
UBE2D3-216ENST00000503742 CALCRLQ16602 461 aa24.11■■□□□ 1.45
UBE2D3-216ENST00000503742 CABP7Q86V35 215 aa24.11■■□□□ 1.45
UBE2D3-216ENST00000503742 SPTLC3Q9NUV7 552 aa24.11■■□□□ 1.45
UBE2D3-216ENST00000503742 KBTBD4Q9NVX7 518 aa24.11■■□□□ 1.45
UBE2D3-216ENST00000503742 PPP1R1BQ9UD71 204 aaPredicted RBP24.11■■□□□ 1.45
UBE2D3-216ENST00000503742 PPP1R3GB7ZBB8 358 aa24.1■■□□□ 1.45
UBE2D3-216ENST00000503742 FXR2P51116 673 aaKnown RBP eCLIP24.1■■□□□ 1.45
UBE2D3-216ENST00000503742 NOLC1Q14978 699 aaKnown RBP eCLIP24.1■■□□□ 1.45
UBE2D3-216ENST00000503742 ACER1Q8TDN7 264 aa24.1■■□□□ 1.45
UBE2D3-216ENST00000503742 LRRC15Q8TF66 581 aa24.1■■□□□ 1.45
UBE2D3-216ENST00000503742 AMNQ9BXJ7 453 aa24.1■■□□□ 1.45
UBE2D3-216ENST00000503742 CUEDC2Q9H467 287 aa24.1■■□□□ 1.45
UBE2D3-216ENST00000503742 NFE2L3Q9Y4A8 694 aa24.1■■□□□ 1.45
UBE2D3-216ENST00000503742 RPS12P25398 132 aaKnown RBP24.09■■□□□ 1.45
UBE2D3-216ENST00000503742 TECP42680 631 aa24.09■■□□□ 1.45
UBE2D3-216ENST00000503742 LRRC8AQ8IWT6 810 aa24.09■■□□□ 1.45
UBE2D3-216ENST00000503742 MMTAG2Q9BU76 263 aaKnown RBP24.09■■□□□ 1.45
UBE2D3-216ENST00000503742 MYL1P05976 194 aa24.09■■□□□ 1.45
UBE2D3-216ENST00000503742 KIAA1755Q5JYT7 1200 aa24.09■■□□□ 1.45
UBE2D3-216ENST00000503742 TRMT44Q8IYL2 757 aaKnown RBP24.09■■□□□ 1.45
UBE2D3-216ENST00000503742 DPF2Q92785 391 aa24.09■■□□□ 1.45
UBE2D3-216ENST00000503742 MAGEF1Q9HAY2 307 aa24.09■■□□□ 1.45
UBE2D3-216ENST00000503742 USP17L15C9J2P7 530 aa24.08■■□□□ 1.45
UBE2D3-216ENST00000503742 USP17L13C9JLJ4 530 aa24.08■■□□□ 1.45
UBE2D3-216ENST00000503742 USP17L11C9JVI0 530 aa24.08■■□□□ 1.45
UBE2D3-216ENST00000503742 USP17L18D6R9N7 530 aa24.08■■□□□ 1.45
UBE2D3-216ENST00000503742 USP17L22D6RA61 530 aa24.08■■□□□ 1.45
UBE2D3-216ENST00000503742 USP17L17D6RBQ6 530 aa24.08■■□□□ 1.45
UBE2D3-216ENST00000503742 USP17L19D6RCP7 530 aa24.08■■□□□ 1.45
UBE2D3-216ENST00000503742 USP17L20D6RJB6 530 aa24.08■■□□□ 1.45
UBE2D3-216ENST00000503742 CBFA2T2O43439 604 aa24.08■■□□□ 1.45
UBE2D3-216ENST00000503742 UBASH3AP57075 661 aa24.08■■□□□ 1.45
UBE2D3-216ENST00000503742 USP17L24Q0WX57 530 aa24.08■■□□□ 1.45
UBE2D3-216ENST00000503742 USP17L6PQ6QN14 398 aa24.08■■□□□ 1.45
UBE2D3-216ENST00000503742 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.08■■□□□ 1.45
UBE2D3-216ENST00000503742 FILIP1Q7Z7B0 1213 aa24.08■■□□□ 1.45
UBE2D3-216ENST00000503742 C17orf53Q8N3J3 647 aaPredicted RBP24.08■■□□□ 1.45
UBE2D3-216ENST00000503742 RASSF8Q8NHQ8 419 aa24.08■■□□□ 1.45
UBE2D3-216ENST00000503742 BCS1LQ9Y276 419 aa24.08■■□□□ 1.45
UBE2D3-216ENST00000503742 MEIS2O14770 477 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms