RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 PPP4R3BQ5MIZ7 849 aa25.36■■□□□ 1.65
PCDH1-204ENST00000503492 ZNF592Q92610 1267 aa25.36■■□□□ 1.65
PCDH1-204ENST00000503492 MTMR8Q96EF0 704 aa25.36■■□□□ 1.65
PCDH1-204ENST00000503492 RIC8AQ9NPQ8 531 aa25.36■■□□□ 1.65
PCDH1-204ENST00000503492 STK32BQ9NY57 414 aa25.36■■□□□ 1.65
PCDH1-204ENST00000503492 ADD3Q9UEY8 706 aaKnown RBP25.36■■□□□ 1.65
PCDH1-204ENST00000503492 KLRC4O43908 158 aa25.36■■□□□ 1.65
PCDH1-204ENST00000503492 NPM3O75607 178 aaKnown RBP25.36■■□□□ 1.65
PCDH1-204ENST00000503492 EEF2P13639 858 aaKnown RBP25.36■■□□□ 1.65
PCDH1-204ENST00000503492 PAK1Q13153 545 aa25.36■■□□□ 1.65
PCDH1-204ENST00000503492 PRCPP42785 496 aa25.35■■□□□ 1.65
PCDH1-204ENST00000503492 TC2NQ8N9U0 490 aa25.35■■□□□ 1.65
PCDH1-204ENST00000503492 NELFBQ8WX92 580 aa25.35■■□□□ 1.65
PCDH1-204ENST00000503492 MKL1Q969V6 931 aa25.35■■□□□ 1.65
PCDH1-204ENST00000503492 MTMR9Q96QG7 549 aa25.35■■□□□ 1.65
PCDH1-204ENST00000503492 YDJCA8MPS7 323 aa25.34■■□□□ 1.65
PCDH1-204ENST00000503492 ZBTB5O15062 677 aa25.34■■□□□ 1.65
PCDH1-204ENST00000503492 KMT5BQ4FZB7 885 aa25.34■■□□□ 1.65
PCDH1-204ENST00000503492 TATDN1Q6P1N9 297 aa25.34■■□□□ 1.65
PCDH1-204ENST00000503492 IGSF22Q8N9C0 903 aa25.34■■□□□ 1.65
PCDH1-204ENST00000503492 MMTAG2Q9BU76 263 aaKnown RBP25.34■■□□□ 1.65
PCDH1-204ENST00000503492 TDRD3Q9H7E2 651 aaKnown RBP25.34■■□□□ 1.65
PCDH1-204ENST00000503492 MAPK8IP1Q9UQF2 711 aa25.34■■□□□ 1.65
PCDH1-204ENST00000503492 TDP2O95551 362 aa25.34■■□□□ 1.65
PCDH1-204ENST00000503492 MYL1P05976 194 aa25.34■■□□□ 1.65
PCDH1-204ENST00000503492 KCNB1Q14721 858 aa25.34■■□□□ 1.65
PCDH1-204ENST00000503492 UBE2SQ16763 222 aa25.34■■□□□ 1.65
PCDH1-204ENST00000503492 CUEDC2Q9H467 287 aa25.34■■□□□ 1.65
PCDH1-204ENST00000503492 KANSL2Q9H9L4 492 aa25.34■■□□□ 1.65
PCDH1-204ENST00000503492 NYAP2Q9P242 653 aa25.34■■□□□ 1.65
PCDH1-204ENST00000503492 SLC37A4O43826 429 aa25.33■■□□□ 1.65
PCDH1-204ENST00000503492 CLK2P49760 499 aaKnown RBP25.33■■□□□ 1.65
PCDH1-204ENST00000503492 SIAH1Q8IUQ4 282 aa25.33■■□□□ 1.65
PCDH1-204ENST00000503492 TXKP42681 527 aa25.33■■□□□ 1.65
PCDH1-204ENST00000503492 ADKP55263 362 aaKnown RBP25.33■■□□□ 1.65
PCDH1-204ENST00000503492 CC2D2BQ6DHV5 1058 aa25.33■■□□□ 1.65
PCDH1-204ENST00000503492 CTAGE1Q96RT6 745 aa25.33■■□□□ 1.65
PCDH1-204ENST00000503492 PPIP5K2O43314 1243 aa25.32■■□□□ 1.64
PCDH1-204ENST00000503492 C21orf2O43822 256 aa25.32■■□□□ 1.64
PCDH1-204ENST00000503492 PBX1P40424 430 aa25.32■■□□□ 1.64
PCDH1-204ENST00000503492 SEPT2Q15019 361 aa25.32■■□□□ 1.64
PCDH1-204ENST00000503492 CALCRLQ16602 461 aa25.32■■□□□ 1.64
PCDH1-204ENST00000503492 ADSSL1Q8N142 457 aa25.32■■□□□ 1.64
PCDH1-204ENST00000503492 TRIM34Q9BYJ4 488 aa25.32■■□□□ 1.64
PCDH1-204ENST00000503492 MAGEF1Q9HAY2 307 aa25.32■■□□□ 1.64
PCDH1-204ENST00000503492 SUPT20HQ8NEM7 779 aa25.32■■□□□ 1.64
PCDH1-204ENST00000503492 CTIFO43310 598 aaKnown RBP25.31■■□□□ 1.64
PCDH1-204ENST00000503492 RAD21O60216 631 aa25.31■■□□□ 1.64
PCDH1-204ENST00000503492 RHOBTB3O94955 611 aa25.31■■□□□ 1.64
PCDH1-204ENST00000503492 TNNI2P48788 182 aa25.31■■□□□ 1.64
PCDH1-204ENST00000503492 CUL5Q93034 780 aa25.31■■□□□ 1.64
PCDH1-204ENST00000503492 PRMT6Q96LA8 375 aaPredicted RBP25.31■■□□□ 1.64
PCDH1-204ENST00000503492 RGS17Q9UGC6 210 aaPredicted RBP25.31■■□□□ 1.64
PCDH1-204ENST00000503492 SLFN13Q68D06 897 aa25.31■■□□□ 1.64
PCDH1-204ENST00000503492 DCAF4Q8WV16 495 aa25.31■■□□□ 1.64
PCDH1-204ENST00000503492 PDGFDQ9GZP0 370 aaPredicted RBP25.31■■□□□ 1.64
PCDH1-204ENST00000503492 LIMA1Q9UHB6 759 aaKnown RBP25.31■■□□□ 1.64
PCDH1-204ENST00000503492 SLC1A4P43007 532 aa25.3■■□□□ 1.64
PCDH1-204ENST00000503492 KRT31Q15323 416 aa25.3■■□□□ 1.64
PCDH1-204ENST00000503492 BAG1Q99933 345 aaPredicted RBP25.3■■□□□ 1.64
PCDH1-204ENST00000503492 KIF2AO00139 706 aaPredicted RBP25.3■■□□□ 1.64
PCDH1-204ENST00000503492 ARHGAP6O43182 974 aa25.3■■□□□ 1.64
PCDH1-204ENST00000503492 GDF11O95390 407 aa25.3■■□□□ 1.64
PCDH1-204ENST00000503492 FXR2P51116 673 aaKnown RBP eCLIP25.3■■□□□ 1.64
PCDH1-204ENST00000503492 FILIP1LQ4L180 1135 aa25.3■■□□□ 1.64
PCDH1-204ENST00000503492 TMEM179Q6ZVK1 233 aa25.3■■□□□ 1.64
PCDH1-204ENST00000503492 LRRC10BA6NIK2 292 aa25.29■■□□□ 1.64
PCDH1-204ENST00000503492 MRPL12P52815 198 aaKnown RBP25.29■■□□□ 1.64
PCDH1-204ENST00000503492 ICA1Q05084 483 aa25.29■■□□□ 1.64
PCDH1-204ENST00000503492 QRICH1Q2TAL8 776 aa25.29■■□□□ 1.64
PCDH1-204ENST00000503492 TRIM9Q9C026 710 aa25.29■■□□□ 1.64
PCDH1-204ENST00000503492 PSTPIP2Q9H939 334 aa25.29■■□□□ 1.64
PCDH1-204ENST00000503492 ATRNL1Q5VV63 1379 aa25.29■■□□□ 1.64
PCDH1-204ENST00000503492 ENTPD3O75355 529 aa25.29■■□□□ 1.64
PCDH1-204ENST00000503492 POTEAQ6S8J7 498 aa25.29■■□□□ 1.64
PCDH1-204ENST00000503492 FCHSD1Q86WN1 690 aa25.29■■□□□ 1.64
PCDH1-204ENST00000503492 ZNF710Q8N1W2 664 aa25.29■■□□□ 1.64
PCDH1-204ENST00000503492 GIMAP8Q8ND71 665 aaPredicted RBP25.29■■□□□ 1.64
PCDH1-204ENST00000503492 LRWD1Q9UFC0 647 aa25.29■■□□□ 1.64
PCDH1-204ENST00000503492 TRIM49BA6NDI0 452 aa25.28■■□□□ 1.64
PCDH1-204ENST00000503492 CCT6AP40227 531 aaKnown RBP25.28■■□□□ 1.64
PCDH1-204ENST00000503492 SEMA3FQ13275 785 aa25.28■■□□□ 1.64
PCDH1-204ENST00000503492 ABCB5Q2M3G0 1257 aa25.28■■□□□ 1.64
PCDH1-204ENST00000503492 PPP4R3AQ6IN85 833 aa25.28■■□□□ 1.64
PCDH1-204ENST00000503492 KIF18AQ8NI77 898 aa25.28■■□□□ 1.64
PCDH1-204ENST00000503492 CALML4Q96GE6 196 aa25.28■■□□□ 1.64
PCDH1-204ENST00000503492 C7orf25Q9BPX7 421 aa25.28■■□□□ 1.64
PCDH1-204ENST00000503492 RRP9O43818 475 aaKnown RBP25.27■■□□□ 1.64
PCDH1-204ENST00000503492 STX10O60499 249 aa25.27■■□□□ 1.64
PCDH1-204ENST00000503492 PMS1P54277 932 aaKnown RBP25.27■■□□□ 1.64
PCDH1-204ENST00000503492 JAG1P78504 1218 aa25.27■■□□□ 1.64
PCDH1-204ENST00000503492 GRB10Q13322 594 aa25.27■■□□□ 1.64
PCDH1-204ENST00000503492 CCP110O43303 1012 aa25.27■■□□□ 1.64
PCDH1-204ENST00000503492 SPAG1Q07617 926 aa25.27■■□□□ 1.64
PCDH1-204ENST00000503492 TCP11X2Q5H9J9 407 aa25.27■■□□□ 1.64
PCDH1-204ENST00000503492 ATF5Q9Y2D1 282 aaPredicted RBP25.27■■□□□ 1.64
PCDH1-204ENST00000503492 MYH7BA7E2Y1 1941 aa25.27■■□□□ 1.64
PCDH1-204ENST00000503492 KCNJ18B7U540 433 aa25.26■■□□□ 1.63
PCDH1-204ENST00000503492 AKR1B15C9JRZ8 316 aaPredicted RBP25.26■■□□□ 1.63
PCDH1-204ENST00000503492 COPB1P53618 953 aaKnown RBP25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms