RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 ACLYP53396 1101 aa22.83■■□□□ 1.25
UBE2D3-215ENST00000503418 TLE2Q04725 743 aa22.83■■□□□ 1.25
UBE2D3-215ENST00000503418 KCNA10Q16322 511 aa22.83■■□□□ 1.25
UBE2D3-215ENST00000503418 LRIT3Q3SXY7 679 aa22.83■■□□□ 1.25
UBE2D3-215ENST00000503418 KLHDC9Q8NEP7 349 aa22.83■■□□□ 1.25
UBE2D3-215ENST00000503418 NUP133Q8WUM0 1156 aa22.83■■□□□ 1.25
UBE2D3-215ENST00000503418 KATNBL1Q9H079 304 aa22.83■■□□□ 1.25
UBE2D3-215ENST00000503418 IL25Q9H293 177 aa22.83■■□□□ 1.25
UBE2D3-215ENST00000503418 STARD7Q9NQZ5 370 aa22.83■■□□□ 1.25
UBE2D3-215ENST00000503418 CTNNA3Q9UI47 895 aa22.83■■□□□ 1.25
UBE2D3-215ENST00000503418 MOXD2PA6NHM9 499 aa22.82■■□□□ 1.24
UBE2D3-215ENST00000503418 PQBP1O60828 265 aaKnown RBP22.82■■□□□ 1.24
UBE2D3-215ENST00000503418 IRX5P78411 483 aaPredicted RBP22.82■■□□□ 1.24
UBE2D3-215ENST00000503418 NOL8Q76FK4 1167 aaKnown RBP22.82■■□□□ 1.24
UBE2D3-215ENST00000503418 SH3RF1Q7Z6J0 888 aa22.82■■□□□ 1.24
UBE2D3-215ENST00000503418 DGKHQ86XP1 1220 aa22.82■■□□□ 1.24
UBE2D3-215ENST00000503418 DDX49Q9Y6V7 483 aaKnown RBP22.82■■□□□ 1.24
UBE2D3-215ENST00000503418 ASTN1O14525 1302 aa22.82■■□□□ 1.24
UBE2D3-215ENST00000503418 NFIBO00712 420 aa22.81■■□□□ 1.24
UBE2D3-215ENST00000503418 GOLGA8HP0CJ92 632 aa22.81■■□□□ 1.24
UBE2D3-215ENST00000503418 SNHG28P0DPA3 235 aa22.81■■□□□ 1.24
UBE2D3-215ENST00000503418 NT5C2P49902 561 aa22.81■■□□□ 1.24
UBE2D3-215ENST00000503418 CCDC178Q5BJE1 867 aa22.81■■□□□ 1.24
UBE2D3-215ENST00000503418 PURBQ96QR8 312 aaKnown RBP22.81■■□□□ 1.24
UBE2D3-215ENST00000503418 KAT14Q9H8E8 782 aa22.81■■□□□ 1.24
UBE2D3-215ENST00000503418 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.8■■□□□ 1.24
UBE2D3-215ENST00000503418 PTPDC1A2A3K4 754 aa22.8■■□□□ 1.24
UBE2D3-215ENST00000503418 TRIM43BA6NCK2 446 aa22.8■■□□□ 1.24
UBE2D3-215ENST00000503418 CLTBP09497 229 aa22.8■■□□□ 1.24
UBE2D3-215ENST00000503418 CST5P28325 142 aaPredicted RBP22.8■■□□□ 1.24
UBE2D3-215ENST00000503418 GJA9P57773 515 aa22.8■■□□□ 1.24
UBE2D3-215ENST00000503418 TNFAIP2Q03169 654 aa22.8■■□□□ 1.24
UBE2D3-215ENST00000503418 BAATQ14032 418 aaPredicted RBP22.8■■□□□ 1.24
UBE2D3-215ENST00000503418 GPATCH4Q5T3I0 446 aaKnown RBP22.8■■□□□ 1.24
UBE2D3-215ENST00000503418 CCSAPQ6IQ19 270 aaPredicted RBP22.8■■□□□ 1.24
UBE2D3-215ENST00000503418 EEPD1Q7L9B9 569 aa22.8■■□□□ 1.24
UBE2D3-215ENST00000503418 PCSK9Q8NBP7 692 aaKnown RBP22.8■■□□□ 1.24
UBE2D3-215ENST00000503418 PNMA1Q8ND90 353 aa22.8■■□□□ 1.24
UBE2D3-215ENST00000503418 BADQ92934 168 aa22.8■■□□□ 1.24
UBE2D3-215ENST00000503418 TRIM43Q96BQ3 446 aaPredicted RBP22.8■■□□□ 1.24
UBE2D3-215ENST00000503418 ZSCAN10Q96SZ4 725 aaPredicted RBP22.8■■□□□ 1.24
UBE2D3-215ENST00000503418 UPF3AQ9H1J1 476 aaKnown RBP22.8■■□□□ 1.24
UBE2D3-215ENST00000503418 ASGR1P07306 291 aa22.79■■□□□ 1.24
UBE2D3-215ENST00000503418 GNASQ5JWF2 1037 aa22.79■■□□□ 1.24
UBE2D3-215ENST00000503418 FBXO16Q8IX29 292 aaPredicted RBP22.79■■□□□ 1.24
UBE2D3-215ENST00000503418 VTI1AQ96AJ9 217 aa22.79■■□□□ 1.24
UBE2D3-215ENST00000503418 GLT1D1Q96MS3 346 aa22.79■■□□□ 1.24
UBE2D3-215ENST00000503418 KRT23Q9C075 422 aa22.79■■□□□ 1.24
UBE2D3-215ENST00000503418 ZSWIM5Q9P217 1185 aa22.79■■□□□ 1.24
UBE2D3-215ENST00000503418 TNKSO95271 1327 aa22.79■■□□□ 1.24
UBE2D3-215ENST00000503418 RAD50Q92878 1312 aa22.79■■□□□ 1.24
UBE2D3-215ENST00000503418 ENAHQ8N8S7 591 aaPredicted RBP22.78■■□□□ 1.24
UBE2D3-215ENST00000503418 UBA5Q9GZZ9 404 aa22.78■■□□□ 1.24
UBE2D3-215ENST00000503418 CPVLQ9H3G5 476 aa22.78■■□□□ 1.24
UBE2D3-215ENST00000503418 CNNM2Q9H8M5 875 aa22.78■■□□□ 1.24
UBE2D3-215ENST00000503418 PNMA2Q9UL42 364 aa22.78■■□□□ 1.24
UBE2D3-215ENST00000503418 CALML3P27482 149 aa22.77■■□□□ 1.24
UBE2D3-215ENST00000503418 USH1GQ495M9 461 aa22.77■■□□□ 1.24
UBE2D3-215ENST00000503418 SLC30A10Q6XR72 485 aa22.77■■□□□ 1.24
UBE2D3-215ENST00000503418 TLK2Q86UE8 772 aa22.77■■□□□ 1.24
UBE2D3-215ENST00000503418 RUFY2Q8WXA3 655 aa22.77■■□□□ 1.24
UBE2D3-215ENST00000503418 UBAC1Q9BSL1 405 aa22.77■■□□□ 1.24
UBE2D3-215ENST00000503418 PDGFCQ9NRA1 345 aa22.77■■□□□ 1.24
UBE2D3-215ENST00000503418 ADD3Q9UEY8 706 aaKnown RBP22.77■■□□□ 1.24
UBE2D3-215ENST00000503418 DCDC2CA8MYV0 355 aa22.76■■□□□ 1.23
UBE2D3-215ENST00000503418 ALDH5A1P51649 535 aaPredicted RBP22.76■■□□□ 1.23
UBE2D3-215ENST00000503418 BEX3Q00994 111 aa22.76■■□□□ 1.23
UBE2D3-215ENST00000503418 RNF207Q6ZRF8 634 aa22.76■■□□□ 1.23
UBE2D3-215ENST00000503418 CLEC4DQ8WXI8 215 aa22.76■■□□□ 1.23
UBE2D3-215ENST00000503418 TMEM39AQ9NV64 488 aa22.76■■□□□ 1.23
UBE2D3-215ENST00000503418 MYH6P13533 1939 aa22.76■■□□□ 1.23
UBE2D3-215ENST00000503418 ELP1O95163 1332 aa22.76■■□□□ 1.23
UBE2D3-215ENST00000503418 WDR19Q8NEZ3 1342 aa22.76■■□□□ 1.23
UBE2D3-215ENST00000503418 RAG1P15918 1043 aa22.75■■□□□ 1.23
UBE2D3-215ENST00000503418 SMPD1P17405 629 aa22.75■■□□□ 1.23
UBE2D3-215ENST00000503418 PTGS1P23219 599 aa22.75■■□□□ 1.23
UBE2D3-215ENST00000503418 CHMLP26374 656 aa22.75■■□□□ 1.23
UBE2D3-215ENST00000503418 ASPRV1Q53RT3 343 aa22.75■■□□□ 1.23
UBE2D3-215ENST00000503418 GPR153Q6NV75 609 aa22.75■■□□□ 1.23
UBE2D3-215ENST00000503418 Q7L0L9 218 aa22.75■■□□□ 1.23
UBE2D3-215ENST00000503418 ANKRD33Q7Z3H0 272 aa22.75■■□□□ 1.23
UBE2D3-215ENST00000503418 ANKS1AQ92625 1134 aa22.75■■□□□ 1.23
UBE2D3-215ENST00000503418 AP5M1Q9H0R1 490 aa22.75■■□□□ 1.23
UBE2D3-215ENST00000503418 VTA1Q9NP79 307 aa22.75■■□□□ 1.23
UBE2D3-215ENST00000503418 GNEQ9Y223 722 aaKnown RBP22.75■■□□□ 1.23
UBE2D3-215ENST00000503418 CTAGE5O15320 804 aa22.74■■□□□ 1.23
UBE2D3-215ENST00000503418 DYNC1LI2O43237 492 aaPredicted RBP22.74■■□□□ 1.23
UBE2D3-215ENST00000503418 ITGB8P26012 769 aa22.74■■□□□ 1.23
UBE2D3-215ENST00000503418 FAAP100Q0VG06 881 aa22.74■■□□□ 1.23
UBE2D3-215ENST00000503418 CDC37Q16543 378 aaPredicted RBP22.74■■□□□ 1.23
UBE2D3-215ENST00000503418 IFIT1BQ5T764 474 aaKnown RBP22.74■■□□□ 1.23
UBE2D3-215ENST00000503418 IQSEC1Q6DN90 963 aa22.74■■□□□ 1.23
UBE2D3-215ENST00000503418 TAPT1Q6NXT6 567 aa22.74■■□□□ 1.23
UBE2D3-215ENST00000503418 KIAA1211Q6ZU35 1233 aa22.74■■□□□ 1.23
UBE2D3-215ENST00000503418 DEFB123Q8N688 67 aa22.74■■□□□ 1.23
UBE2D3-215ENST00000503418 MORC4Q8TE76 937 aa22.74■■□□□ 1.23
UBE2D3-215ENST00000503418 TOX2Q96NM4 488 aa22.74■■□□□ 1.23
UBE2D3-215ENST00000503418 MROH7Q68CQ1 1323 aa22.74■■□□□ 1.23
UBE2D3-215ENST00000503418 A0A0U1RQG5 324 aaPredicted RBP22.73■■□□□ 1.23
UBE2D3-215ENST00000503418 KIAA0355O15063 1070 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms