RNA–Protein interactions for RNA: ENST00000503084.1

TNPO1-202, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 623 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-202ENST00000503084 ZBED2Q9BTP6 218 aa13.92□□□□□ -0.18
TNPO1-202ENST00000503084 FSD1Q9BTV5 496 aa13.92□□□□□ -0.18
TNPO1-202ENST00000503084 VCPKMTQ9H867 229 aa13.92□□□□□ -0.18
TNPO1-202ENST00000503084 PPP1R9AQ9ULJ8 1098 aa13.92□□□□□ -0.18
TNPO1-202ENST00000503084 NAV1Q8NEY1 1877 aa13.92□□□□□ -0.18
TNPO1-202ENST00000503084 EP300Q09472 2414 aaPredicted RBP13.92□□□□□ -0.18
TNPO1-202ENST00000503084 UBTFL1P0CB47 393 aaPredicted RBP13.91□□□□□ -0.18
TNPO1-202ENST00000503084 TNFAIP2Q03169 654 aa13.91□□□□□ -0.18
TNPO1-202ENST00000503084 GABPAQ06546 454 aa13.91□□□□□ -0.18
TNPO1-202ENST00000503084 TIGD5Q53EQ6 642 aa13.91□□□□□ -0.18
TNPO1-202ENST00000503084 SIAH1Q8IUQ4 282 aa13.91□□□□□ -0.18
TNPO1-202ENST00000503084 MIGA1Q8NAN2 632 aa13.91□□□□□ -0.18
TNPO1-202ENST00000503084 IRF2BPLQ9H1B7 796 aa13.91□□□□□ -0.18
TNPO1-202ENST00000503084 TRPC6Q9Y210 931 aa13.91□□□□□ -0.18
TNPO1-202ENST00000503084 GNEQ9Y223 722 aaKnown RBP13.91□□□□□ -0.18
TNPO1-202ENST00000503084 TMX2Q9Y320 296 aa13.91□□□□□ -0.18
TNPO1-202ENST00000503084 H0Y858 1186 aa13.9□□□□□ -0.18
TNPO1-202ENST00000503084 IQCF3P0C7M6 154 aa13.9□□□□□ -0.18
TNPO1-202ENST00000503084 SUPT20HL2P0C7V6 817 aa13.9□□□□□ -0.18
TNPO1-202ENST00000503084 ICA1Q05084 483 aa13.9□□□□□ -0.18
TNPO1-202ENST00000503084 SMAD2Q15796 467 aaKnown RBP13.9□□□□□ -0.18
TNPO1-202ENST00000503084 TCEAL5Q5H9L2 206 aa13.9□□□□□ -0.18
TNPO1-202ENST00000503084 SNRNP48Q6IEG0 339 aaKnown RBP13.9□□□□□ -0.18
TNPO1-202ENST00000503084 CCDC144CPQ8IYA2 1237 aa13.9□□□□□ -0.18
TNPO1-202ENST00000503084 FBXO22Q8NEZ5 403 aa13.9□□□□□ -0.18
TNPO1-202ENST00000503084 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.9□□□□□ -0.18
TNPO1-202ENST00000503084 C17orf80Q9BSJ5 609 aa13.9□□□□□ -0.18
TNPO1-202ENST00000503084 TEX13BQ9BXU2 312 aa13.9□□□□□ -0.18
TNPO1-202ENST00000503084 TLR9Q9NR96 1032 aa13.9□□□□□ -0.18
TNPO1-202ENST00000503084 RIPK3Q9Y572 518 aa13.9□□□□□ -0.18
TNPO1-202ENST00000503084 CEP250Q9BV73 2442 aa13.9□□□□□ -0.18
TNPO1-202ENST00000503084 PTPRCP08575 1304 aa13.9□□□□□ -0.19
TNPO1-202ENST00000503084 PITPNM1O00562 1244 aa13.89□□□□□ -0.19
TNPO1-202ENST00000503084 ZEB2O60315 1214 aa13.89□□□□□ -0.19
TNPO1-202ENST00000503084 GJB5O95377 273 aa13.89□□□□□ -0.19
TNPO1-202ENST00000503084 UQCRFS1P1P0C7P4 283 aa13.89□□□□□ -0.19
TNPO1-202ENST00000503084 CYP7A1P22680 504 aa13.89□□□□□ -0.19
TNPO1-202ENST00000503084 CLUL1Q15846 466 aa13.89□□□□□ -0.19
TNPO1-202ENST00000503084 TMEM179Q6ZVK1 233 aa13.89□□□□□ -0.19
TNPO1-202ENST00000503084 WDR63Q8IWG1 891 aa13.89□□□□□ -0.19
TNPO1-202ENST00000503084 MRPL50Q8N5N7 158 aaKnown RBP13.89□□□□□ -0.19
TNPO1-202ENST00000503084 RAD9AQ99638 391 aa13.89□□□□□ -0.19
TNPO1-202ENST00000503084 AP5M1Q9H0R1 490 aa13.89□□□□□ -0.19
TNPO1-202ENST00000503084 ARHGEF10LQ9HCE6 1279 aa13.89□□□□□ -0.19
TNPO1-202ENST00000503084 PIH1D3Q9NQM4 214 aaKnown RBP13.89□□□□□ -0.19
TNPO1-202ENST00000503084 CLDND1Q9NY35 253 aa13.89□□□□□ -0.19
TNPO1-202ENST00000503084 MAP1BP46821 2468 aaKnown RBP13.88□□□□□ -0.19
TNPO1-202ENST00000503084 DYNC1LI2O43237 492 aaPredicted RBP13.88□□□□□ -0.19
TNPO1-202ENST00000503084 CYP2E1P05181 493 aaPredicted RBP13.88□□□□□ -0.19
TNPO1-202ENST00000503084 PTPROQ16827 1216 aa13.88□□□□□ -0.19
TNPO1-202ENST00000503084 RPAINQ86UA6 219 aa13.88□□□□□ -0.19
TNPO1-202ENST00000503084 BANK1Q8NDB2 785 aa13.88□□□□□ -0.19
TNPO1-202ENST00000503084 SH2D4AQ9H788 454 aa13.88□□□□□ -0.19
TNPO1-202ENST00000503084 SALL2Q9Y467 1007 aaPredicted RBP13.88□□□□□ -0.19
TNPO1-202ENST00000503084 SPTBN2O15020 2390 aa13.88□□□□□ -0.19
TNPO1-202ENST00000503084 SMPD1P17405 629 aa13.87□□□□□ -0.19
TNPO1-202ENST00000503084 LTBRP36941 435 aa13.87□□□□□ -0.19
TNPO1-202ENST00000503084 ZXDAP98168 799 aa13.87□□□□□ -0.19
TNPO1-202ENST00000503084 RETREG2Q8NC44 543 aa13.87□□□□□ -0.19
TNPO1-202ENST00000503084 PPP1R13LQ8WUF5 828 aa13.87□□□□□ -0.19
TNPO1-202ENST00000503084 CNTNAP3BQ96NU0 1288 aa13.87□□□□□ -0.19
TNPO1-202ENST00000503084 CRBNQ96SW2 442 aa13.87□□□□□ -0.19
TNPO1-202ENST00000503084 CNTNAP3Q9BZ76 1288 aa13.87□□□□□ -0.19
TNPO1-202ENST00000503084 PRKRIP1Q9H875 184 aaPredicted RBP13.87□□□□□ -0.19
TNPO1-202ENST00000503084 ATG2AQ2TAZ0 1938 aa13.86□□□□□ -0.19
TNPO1-202ENST00000503084 SCN10AQ9Y5Y9 1956 aa13.86□□□□□ -0.19
TNPO1-202ENST00000503084 RBAK-RBAKDNI3L0D1 243 aa13.86□□□□□ -0.19
TNPO1-202ENST00000503084 STXBP3O00186 592 aa13.86□□□□□ -0.19
TNPO1-202ENST00000503084 MBTPS2O43462 519 aa13.86□□□□□ -0.19
TNPO1-202ENST00000503084 KDM4AO75164 1064 aa13.86□□□□□ -0.19
TNPO1-202ENST00000503084 POLR3DP05423 398 aaPredicted RBP13.86□□□□□ -0.19
TNPO1-202ENST00000503084 AVPR2P30518 371 aa13.86□□□□□ -0.19
TNPO1-202ENST00000503084 SLC4A3P48751 1232 aa13.86□□□□□ -0.19
TNPO1-202ENST00000503084 DDX10Q13206 875 aaKnown RBP13.86□□□□□ -0.19
TNPO1-202ENST00000503084 FAM47CQ5HY64 1035 aa13.86□□□□□ -0.19
TNPO1-202ENST00000503084 FAM83BQ5T0W9 1011 aa13.86□□□□□ -0.19
TNPO1-202ENST00000503084 TMEM63BQ5T3F8 832 aa13.86□□□□□ -0.19
TNPO1-202ENST00000503084 FAM117BQ6P1L5 589 aa13.86□□□□□ -0.19
TNPO1-202ENST00000503084 CTNNA3Q9UI47 895 aa13.86□□□□□ -0.19
TNPO1-202ENST00000503084 DDX49Q9Y6V7 483 aaKnown RBP13.86□□□□□ -0.19
TNPO1-202ENST00000503084 MYH8P13535 1937 aa13.86□□□□□ -0.19
TNPO1-202ENST00000503084 USP24Q9UPU5 2620 aa13.85□□□□□ -0.19
TNPO1-202ENST00000503084 AKR1B1P15121 316 aa13.85□□□□□ -0.19
TNPO1-202ENST00000503084 NBL1P41271 181 aa13.85□□□□□ -0.19
TNPO1-202ENST00000503084 CNTN2Q02246 1040 aa13.85□□□□□ -0.19
TNPO1-202ENST00000503084 DLX2Q07687 328 aaPredicted RBP13.85□□□□□ -0.19
TNPO1-202ENST00000503084 TCTN1Q2MV58 587 aa13.85□□□□□ -0.19
TNPO1-202ENST00000503084 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.85□□□□□ -0.19
TNPO1-202ENST00000503084 CERS3Q8IU89 383 aa13.85□□□□□ -0.19
TNPO1-202ENST00000503084 NSUN3Q9H649 340 aaKnown RBP13.85□□□□□ -0.19
TNPO1-202ENST00000503084 ZAP70P43403 619 aa13.84□□□□□ -0.19
TNPO1-202ENST00000503084 PURAQ00577 322 aaKnown RBP13.84□□□□□ -0.19
TNPO1-202ENST00000503084 SMAD4Q13485 552 aaKnown RBP13.84□□□□□ -0.19
TNPO1-202ENST00000503084 GPNMBQ14956 572 aa13.84□□□□□ -0.19
TNPO1-202ENST00000503084 TTC39AQ5SRH9 613 aa13.84□□□□□ -0.19
TNPO1-202ENST00000503084 ADSSL1Q8N142 457 aa13.84□□□□□ -0.19
TNPO1-202ENST00000503084 ANKRD35Q8N283 1001 aa13.84□□□□□ -0.19
TNPO1-202ENST00000503084 ASIC4Q96FT7 647 aa13.84□□□□□ -0.19
TNPO1-202ENST00000503084 PDGFCQ9NRA1 345 aa13.84□□□□□ -0.19
TNPO1-202ENST00000503084 GALR2O43603 387 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms