RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 IQUBQ8NA54 791 aa13.09□□□□□ -0.31
USP46-204ENST00000503060 IDI2Q9BXS1 227 aa13.09□□□□□ -0.31
USP46-204ENST00000503060 IMPACTQ9P2X3 320 aa13.09□□□□□ -0.31
USP46-204ENST00000503060 GREB1LQ9C091 1923 aaPredicted RBP13.08□□□□□ -0.32
USP46-204ENST00000503060 ESYT2A0FGR8 921 aa13.08□□□□□ -0.32
USP46-204ENST00000503060 hCG_1984214I3L0E3 225 aa13.08□□□□□ -0.32
USP46-204ENST00000503060 CACNB3P54284 484 aa13.08□□□□□ -0.32
USP46-204ENST00000503060 DPYDQ12882 1025 aa13.08□□□□□ -0.32
USP46-204ENST00000503060 DNTTIP2Q5QJE6 756 aaKnown RBP13.08□□□□□ -0.32
USP46-204ENST00000503060 ZNF713Q8N859 430 aaPredicted RBP13.08□□□□□ -0.32
USP46-204ENST00000503060 SUPT20HQ8NEM7 779 aa13.08□□□□□ -0.32
USP46-204ENST00000503060 CCDC17Q96LX7 622 aa13.08□□□□□ -0.32
USP46-204ENST00000503060 DHX36Q9H2U1 1008 aaKnown RBP13.08□□□□□ -0.32
USP46-204ENST00000503060 FANCLQ9NW38 375 aa13.08□□□□□ -0.32
USP46-204ENST00000503060 SERPINA10Q9UK55 444 aa13.08□□□□□ -0.32
USP46-204ENST00000503060 MPHOSPH10O00566 681 aaKnown RBP13.08□□□□□ -0.32
USP46-204ENST00000503060 GSDMDP57764 484 aa13.08□□□□□ -0.32
USP46-204ENST00000503060 ZNF543Q08ER8 600 aa13.08□□□□□ -0.32
USP46-204ENST00000503060 TCP10Q12799 353 aa13.08□□□□□ -0.32
USP46-204ENST00000503060 TMEM60Q9H2L4 133 aa13.08□□□□□ -0.32
USP46-204ENST00000503060 DNAJC18Q9H819 358 aa13.08□□□□□ -0.32
USP46-204ENST00000503060 GPCPD1Q9NPB8 672 aa13.08□□□□□ -0.32
USP46-204ENST00000503060 FAM198AQ9UFP1 575 aa13.08□□□□□ -0.32
USP46-204ENST00000503060 CBFA2T2O43439 604 aa13.07□□□□□ -0.32
USP46-204ENST00000503060 SLURP2P0DP57 97 aa13.07□□□□□ -0.32
USP46-204ENST00000503060 FMR1Q06787 632 aaKnown RBP eCLIP13.07□□□□□ -0.32
USP46-204ENST00000503060 NONOQ15233 471 aaKnown RBP eCLIP13.07□□□□□ -0.32
USP46-204ENST00000503060 PPP4R3BQ5MIZ7 849 aa13.07□□□□□ -0.32
USP46-204ENST00000503060 PDXDC2PQ6P474 469 aa13.07□□□□□ -0.32
USP46-204ENST00000503060 DTHD1Q6ZMT9 781 aa13.07□□□□□ -0.32
USP46-204ENST00000503060 TMC6Q7Z403 805 aa13.07□□□□□ -0.32
USP46-204ENST00000503060 ENOX1Q8TC92 643 aaKnown RBP13.07□□□□□ -0.32
USP46-204ENST00000503060 MAF1Q9H063 256 aa13.07□□□□□ -0.32
USP46-204ENST00000503060 SIPA1L1O43166 1804 aa13.07□□□□□ -0.32
USP46-204ENST00000503060 DDTLA6NHG4 134 aaPredicted RBP13.07□□□□□ -0.32
USP46-204ENST00000503060 LAD1O00515 517 aa13.07□□□□□ -0.32
USP46-204ENST00000503060 CASP1P29466 404 aa13.07□□□□□ -0.32
USP46-204ENST00000503060 TXLNAP40222 546 aa13.07□□□□□ -0.32
USP46-204ENST00000503060 SLC20A2Q08357 652 aa13.07□□□□□ -0.32
USP46-204ENST00000503060 CT47A1Q5JQC4 288 aaPredicted RBP13.07□□□□□ -0.32
USP46-204ENST00000503060 GSDMAQ96QA5 445 aa13.07□□□□□ -0.32
USP46-204ENST00000503060 SERPINC1P01008 464 aa13.06□□□□□ -0.32
USP46-204ENST00000503060 TPM2P07951 284 aa13.06□□□□□ -0.32
USP46-204ENST00000503060 ERCC5P28715 1186 aaPredicted RBP13.06□□□□□ -0.32
USP46-204ENST00000503060 PRPHP41219 470 aa13.06□□□□□ -0.32
USP46-204ENST00000503060 UBASH3AP57075 661 aa13.06□□□□□ -0.32
USP46-204ENST00000503060 ATP2B2Q01814 1243 aa13.06□□□□□ -0.32
USP46-204ENST00000503060 SH3BP5LQ7L8J4 393 aa13.06□□□□□ -0.32
USP46-204ENST00000503060 DPF2Q92785 391 aa13.06□□□□□ -0.32
USP46-204ENST00000503060 METTL14Q9HCE5 456 aaKnown RBP13.06□□□□□ -0.32
USP46-204ENST00000503060 PI4KBQ9UBF8 816 aa13.06□□□□□ -0.32
USP46-204ENST00000503060 ARIH1Q9Y4X5 557 aaPredicted RBP13.06□□□□□ -0.32
USP46-204ENST00000503060 PPIP5K2O43314 1243 aa13.05□□□□□ -0.32
USP46-204ENST00000503060 C21orf2O43822 256 aa13.05□□□□□ -0.32
USP46-204ENST00000503060 GTPBP6O43824 516 aaPredicted RBP13.05□□□□□ -0.32
USP46-204ENST00000503060 APLP1P51693 650 aa13.05□□□□□ -0.32
USP46-204ENST00000503060 CCZ1BP86790 482 aa13.05□□□□□ -0.32
USP46-204ENST00000503060 CCZ1P86791 482 aaPredicted RBP13.05□□□□□ -0.32
USP46-204ENST00000503060 REXO1Q8N1G1 1221 aaKnown RBP13.05□□□□□ -0.32
USP46-204ENST00000503060 STAMQ92783 540 aa13.05□□□□□ -0.32
USP46-204ENST00000503060 MED15Q96RN5 788 aa13.05□□□□□ -0.32
USP46-204ENST00000503060 JMJD4Q9H9V9 463 aa13.05□□□□□ -0.32
USP46-204ENST00000503060 NFE2L3Q9Y4A8 694 aa13.05□□□□□ -0.32
USP46-204ENST00000503060 FAM196BA6NMK8 535 aa13.05□□□□□ -0.32
USP46-204ENST00000503060 YDJCA8MPS7 323 aa13.05□□□□□ -0.32
USP46-204ENST00000503060 LETM2Q2VYF4 491 aa13.05□□□□□ -0.32
USP46-204ENST00000503060 GPATCH4Q5T3I0 446 aaKnown RBP13.05□□□□□ -0.32
USP46-204ENST00000503060 JAKMIP3Q5VZ66 844 aa13.05□□□□□ -0.32
USP46-204ENST00000503060 NEK8Q86SG6 692 aa13.05□□□□□ -0.32
USP46-204ENST00000503060 ZSCAN29Q8IWY8 852 aaPredicted RBP13.05□□□□□ -0.32
USP46-204ENST00000503060 TRMT44Q8IYL2 757 aaKnown RBP13.05□□□□□ -0.32
USP46-204ENST00000503060 COA7Q96BR5 231 aa13.05□□□□□ -0.32
USP46-204ENST00000503060 BIN2Q9UBW5 565 aaPredicted RBP13.05□□□□□ -0.32
USP46-204ENST00000503060 PNMA6FA0A0J9YX94 578 aa13.04□□□□□ -0.32
USP46-204ENST00000503060 SKILP12757 684 aa13.04□□□□□ -0.32
USP46-204ENST00000503060 ZNF18P17022 549 aa13.04□□□□□ -0.32
USP46-204ENST00000503060 CDC25AP30304 524 aa13.04□□□□□ -0.32
USP46-204ENST00000503060 ADCY7P51828 1080 aa13.04□□□□□ -0.32
USP46-204ENST00000503060 DHX8Q14562 1220 aaKnown RBP13.04□□□□□ -0.32
USP46-204ENST00000503060 KARSQ15046 597 aaKnown RBP13.04□□□□□ -0.32
USP46-204ENST00000503060 CFAP100Q494V2 611 aa13.04□□□□□ -0.32
USP46-204ENST00000503060 CERKLQ49MI3 558 aaPredicted RBP13.04□□□□□ -0.32
USP46-204ENST00000503060 TTBK2Q6IQ55 1244 aa13.04□□□□□ -0.32
USP46-204ENST00000503060 PPP1R18Q6NYC8 613 aa13.04□□□□□ -0.32
USP46-204ENST00000503060 ADGRF4Q8IZF3 695 aa13.04□□□□□ -0.32
USP46-204ENST00000503060 CCDC150Q8NCX0 1101 aa13.04□□□□□ -0.32
USP46-204ENST00000503060 MTRQ99707 1265 aa13.04□□□□□ -0.32
USP46-204ENST00000503060 PDGFDQ9GZP0 370 aaPredicted RBP13.04□□□□□ -0.32
USP46-204ENST00000503060 ZBTB12Q9Y330 459 aaPredicted RBP13.04□□□□□ -0.32
USP46-204ENST00000503060 CCNT1O60563 726 aaKnown RBP13.04□□□□□ -0.32
USP46-204ENST00000503060 OR52Z1P0C646 297 aa13.04□□□□□ -0.32
USP46-204ENST00000503060 STAT6P42226 847 aa13.04□□□□□ -0.32
USP46-204ENST00000503060 KCNA1Q09470 495 aa13.04□□□□□ -0.32
USP46-204ENST00000503060 ORC2Q13416 577 aaPredicted RBP13.04□□□□□ -0.32
USP46-204ENST00000503060 TBCKQ8TEA7 893 aa13.04□□□□□ -0.32
USP46-204ENST00000503060 TRIM34Q9BYJ4 488 aa13.04□□□□□ -0.32
USP46-204ENST00000503060 CCSER1Q9C0I3 900 aa13.04□□□□□ -0.32
USP46-204ENST00000503060 BLZF1Q9H2G9 400 aa13.04□□□□□ -0.32
USP46-204ENST00000503060 TDRD3Q9H7E2 651 aaKnown RBP13.04□□□□□ -0.32
USP46-204ENST00000503060 DISC1Q9NRI5 854 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms