RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 PPP1R11O60927 126 aaPredicted RBP29.15■■■□□ 2.26
LSM6-202ENST00000502781 ELNP15502 786 aa29.15■■■□□ 2.26
LSM6-202ENST00000502781 FUT2Q10981 343 aa29.15■■■□□ 2.26
LSM6-202ENST00000502781 TRMT44Q8IYL2 757 aaKnown RBP29.15■■■□□ 2.26
LSM6-202ENST00000502781 CLEC4DQ8WXI8 215 aa29.15■■■□□ 2.26
LSM6-202ENST00000502781 TRIB2Q92519 343 aa29.15■■■□□ 2.26
LSM6-202ENST00000502781 A1CFQ9NQ94 594 aaKnown RBP29.15■■■□□ 2.26
LSM6-202ENST00000502781 BAZ2BQ9UIF8 2168 aaKnown RBP29.15■■■□□ 2.26
LSM6-202ENST00000502781 PNMA6FA0A0J9YX94 578 aa29.14■■■□□ 2.26
LSM6-202ENST00000502781 PDIA3P30101 505 aaKnown RBP29.14■■■□□ 2.26
LSM6-202ENST00000502781 CDC27P30260 824 aa29.14■■■□□ 2.26
LSM6-202ENST00000502781 DPP9Q86TI2 863 aa29.14■■■□□ 2.26
LSM6-202ENST00000502781 FBXO11Q86XK2 927 aa29.14■■■□□ 2.26
LSM6-202ENST00000502781 SH3TC2Q8TF17 1288 aa29.14■■■□□ 2.26
LSM6-202ENST00000502781 AMNQ9BXJ7 453 aa29.14■■■□□ 2.26
LSM6-202ENST00000502781 DIS3Q9Y2L1 958 aaKnown RBP29.14■■■□□ 2.26
LSM6-202ENST00000502781 METAP2P50579 478 aaKnown RBP eCLIP29.13■■■□□ 2.25
LSM6-202ENST00000502781 CCL14Q16627 93 aa29.13■■■□□ 2.25
LSM6-202ENST00000502781 ZNF792Q3KQV3 632 aa29.13■■■□□ 2.25
LSM6-202ENST00000502781 CMTR1Q8N1G2 835 aaKnown RBP29.13■■■□□ 2.25
LSM6-202ENST00000502781 ANKRD35Q8N283 1001 aa29.13■■■□□ 2.25
LSM6-202ENST00000502781 ZNF274Q96GC6 653 aaPredicted RBP29.13■■■□□ 2.25
LSM6-202ENST00000502781 ZNF333Q96JL9 665 aa29.13■■■□□ 2.25
LSM6-202ENST00000502781 SLC5A4Q9NY91 659 aa29.13■■■□□ 2.25
LSM6-202ENST00000502781 NFIBO00712 420 aa29.13■■■□□ 2.25
LSM6-202ENST00000502781 PGK2P07205 417 aa29.13■■■□□ 2.25
LSM6-202ENST00000502781 USH1GQ495M9 461 aa29.13■■■□□ 2.25
LSM6-202ENST00000502781 HOMER1Q86YM7 354 aa29.13■■■□□ 2.25
LSM6-202ENST00000502781 DDX11Q96FC9 970 aa29.13■■■□□ 2.25
LSM6-202ENST00000502781 UPF2Q9HAU5 1272 aaKnown RBP29.13■■■□□ 2.25
LSM6-202ENST00000502781 FLRT1Q9NZU1 646 aa29.13■■■□□ 2.25
LSM6-202ENST00000502781 ABCB11O95342 1321 aa29.12■■■□□ 2.25
LSM6-202ENST00000502781 HMGCRP04035 888 aa29.12■■■□□ 2.25
LSM6-202ENST00000502781 OLFML2BQ68BL8 750 aa29.12■■■□□ 2.25
LSM6-202ENST00000502781 RRP36Q96EU6 259 aaKnown RBP29.12■■■□□ 2.25
LSM6-202ENST00000502781 MAF1Q9H063 256 aa29.12■■■□□ 2.25
LSM6-202ENST00000502781 CYP39A1Q9NYL5 469 aa29.12■■■□□ 2.25
LSM6-202ENST00000502781 NAP1L2Q9ULW6 460 aaPredicted RBP29.12■■■□□ 2.25
LSM6-202ENST00000502781 CCDC196A0A1B0GTZ2 297 aa29.11■■■□□ 2.25
LSM6-202ENST00000502781 ADD1P35611 737 aaKnown RBP29.11■■■□□ 2.25
LSM6-202ENST00000502781 NEK4P51957 841 aa29.11■■■□□ 2.25
LSM6-202ENST00000502781 RGS22Q8NE09 1264 aa29.11■■■□□ 2.25
LSM6-202ENST00000502781 MAML3Q96JK9 1138 aa29.11■■■□□ 2.25
LSM6-202ENST00000502781 PFASO15067 1338 aa29.11■■■□□ 2.25
LSM6-202ENST00000502781 CNTNAP5Q8WYK1 1306 aa29.11■■■□□ 2.25
LSM6-202ENST00000502781 ZNFX1Q9P2E3 1918 aaKnown RBP29.1■■■□□ 2.25
LSM6-202ENST00000502781 AK2P54819 239 aa29.1■■■□□ 2.25
LSM6-202ENST00000502781 ANKRD1Q15327 319 aa29.1■■■□□ 2.25
LSM6-202ENST00000502781 FAM133AQ8N9E0 248 aa29.1■■■□□ 2.25
LSM6-202ENST00000502781 PCDHA1Q9Y5I3 950 aa29.1■■■□□ 2.25
LSM6-202ENST00000502781 INHAP05111 366 aa29.09■■■□□ 2.25
LSM6-202ENST00000502781 TRAF1Q13077 416 aa29.09■■■□□ 2.25
LSM6-202ENST00000502781 MAP3K21Q5TCX8 1036 aa29.09■■■□□ 2.25
LSM6-202ENST00000502781 CCDC82Q8N4S0 544 aa29.09■■■□□ 2.25
LSM6-202ENST00000502781 FGD4Q96M96 766 aa29.09■■■□□ 2.25
LSM6-202ENST00000502781 TBC1D32Q96NH3 1257 aa29.09■■■□□ 2.25
LSM6-202ENST00000502781 LARP6Q9BRS8 491 aaKnown RBP29.09■■■□□ 2.25
LSM6-202ENST00000502781 MRPL11Q9Y3B7 192 aaKnown RBP29.09■■■□□ 2.25
LSM6-202ENST00000502781 OPLAHO14841 1288 aa29.08■■■□□ 2.25
LSM6-202ENST00000502781 NTRK3Q16288 839 aa29.08■■■□□ 2.25
LSM6-202ENST00000502781 NSMFQ6X4W1 530 aa29.08■■■□□ 2.25
LSM6-202ENST00000502781 UBXN2AP68543 259 aa29.07■■■□□ 2.24
LSM6-202ENST00000502781 GHRHRQ02643 423 aa29.07■■■□□ 2.24
LSM6-202ENST00000502781 TRIM32Q13049 653 aa29.07■■■□□ 2.24
LSM6-202ENST00000502781 ZNF467Q7Z7K2 595 aaPredicted RBP29.07■■■□□ 2.24
LSM6-202ENST00000502781 PIBF1Q8WXW3 757 aa29.07■■■□□ 2.24
LSM6-202ENST00000502781 SEC63Q9UGP8 760 aaKnown RBP29.07■■■□□ 2.24
LSM6-202ENST00000502781 TPCN1Q9ULQ1 816 aa29.07■■■□□ 2.24
LSM6-202ENST00000502781 POTEB2H3BUK9 544 aa29.06■■■□□ 2.24
LSM6-202ENST00000502781 CNTN2Q02246 1040 aa29.06■■■□□ 2.24
LSM6-202ENST00000502781 BAATQ14032 418 aaPredicted RBP29.06■■■□□ 2.24
LSM6-202ENST00000502781 BIN2Q9UBW5 565 aaPredicted RBP29.06■■■□□ 2.24
LSM6-202ENST00000502781 MYH6P13533 1939 aa29.06■■■□□ 2.24
LSM6-202ENST00000502781 RPS6P62753 249 aaKnown RBP29.05■■■□□ 2.24
LSM6-202ENST00000502781 CCT2P78371 535 aaKnown RBP29.05■■■□□ 2.24
LSM6-202ENST00000502781 MTFR1Q15390 333 aa29.05■■■□□ 2.24
LSM6-202ENST00000502781 MAMDC4Q6UXC1 1216 aa29.05■■■□□ 2.24
LSM6-202ENST00000502781 RNF207Q6ZRF8 634 aa29.05■■■□□ 2.24
LSM6-202ENST00000502781 MSL3Q8N5Y2 521 aaKnown RBP29.05■■■□□ 2.24
LSM6-202ENST00000502781 NCOA5Q9HCD5 579 aaKnown RBP29.05■■■□□ 2.24
LSM6-202ENST00000502781 CENPFP49454 3210 aa29.05■■■□□ 2.24
LSM6-202ENST00000502781 hCG_1642624A0A1W2PR95 340 aa29.04■■■□□ 2.24
LSM6-202ENST00000502781 IFNAR1P17181 557 aa29.04■■■□□ 2.24
LSM6-202ENST00000502781 CACNB2Q08289 660 aaPredicted RBP29.04■■■□□ 2.24
LSM6-202ENST00000502781 MFSD14CQ5VZR4 134 aa29.04■■■□□ 2.24
LSM6-202ENST00000502781 SLC30A10Q6XR72 485 aa29.04■■■□□ 2.24
LSM6-202ENST00000502781 MCF2L2Q86YR7 1114 aa29.04■■■□□ 2.24
LSM6-202ENST00000502781 TBC1D5Q92609 795 aa29.04■■■□□ 2.24
LSM6-202ENST00000502781 TINF2Q9BSI4 451 aa29.04■■■□□ 2.24
LSM6-202ENST00000502781 ASTN1O14525 1302 aa29.03■■■□□ 2.24
LSM6-202ENST00000502781 SOWAHBA6NEL2 793 aa29.03■■■□□ 2.24
LSM6-202ENST00000502781 CYP2C19P33261 490 aa29.03■■■□□ 2.24
LSM6-202ENST00000502781 SAMD3Q8N6K7 520 aa29.03■■■□□ 2.24
LSM6-202ENST00000502781 V9GY48 417 aaPredicted RBP29.03■■■□□ 2.24
LSM6-202ENST00000502781 PTPDC1A2A3K4 754 aa29.02■■■□□ 2.24
LSM6-202ENST00000502781 PFKFB2O60825 505 aa29.02■■■□□ 2.24
LSM6-202ENST00000502781 PRKAR2AP13861 404 aaKnown RBP29.02■■■□□ 2.24
LSM6-202ENST00000502781 RABEP1Q15276 862 aa29.02■■■□□ 2.24
LSM6-202ENST00000502781 MAP3K20Q9NYL2 800 aaKnown RBP29.02■■■□□ 2.24
LSM6-202ENST00000502781 RPTORQ8N122 1335 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms