RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 RPTORQ8N122 1335 aa12.46□□□□□ -0.41
UBE2D3-212ENST00000502563 SYNGAP1Q96PV0 1343 aa12.46□□□□□ -0.41
UBE2D3-212ENST00000502563 PNMA6FA0A0J9YX94 578 aa12.46□□□□□ -0.41
UBE2D3-212ENST00000502563 hCG_1984214I3L0E3 225 aa12.46□□□□□ -0.41
UBE2D3-212ENST00000502563 ZBTB43O43298 467 aa12.46□□□□□ -0.41
UBE2D3-212ENST00000502563 CYTH3O43739 400 aa12.46□□□□□ -0.41
UBE2D3-212ENST00000502563 QRICH1Q2TAL8 776 aa12.46□□□□□ -0.41
UBE2D3-212ENST00000502563 TMTC3Q6ZXV5 915 aa12.46□□□□□ -0.41
UBE2D3-212ENST00000502563 DPP9Q86TI2 863 aa12.46□□□□□ -0.41
UBE2D3-212ENST00000502563 ZNF713Q8N859 430 aaPredicted RBP12.46□□□□□ -0.41
UBE2D3-212ENST00000502563 FAM133AQ8N9E0 248 aa12.46□□□□□ -0.41
UBE2D3-212ENST00000502563 TRIB2Q92519 343 aa12.46□□□□□ -0.41
UBE2D3-212ENST00000502563 ZNF274Q96GC6 653 aaPredicted RBP12.46□□□□□ -0.41
UBE2D3-212ENST00000502563 MAML3Q96JK9 1138 aa12.46□□□□□ -0.41
UBE2D3-212ENST00000502563 AGBL1Q96MI9 1066 aa12.46□□□□□ -0.41
UBE2D3-212ENST00000502563 AMNQ9BXJ7 453 aa12.46□□□□□ -0.41
UBE2D3-212ENST00000502563 A1CFQ9NQ94 594 aaKnown RBP12.46□□□□□ -0.41
UBE2D3-212ENST00000502563 PAK6Q9NQU5 681 aaPredicted RBP12.46□□□□□ -0.41
UBE2D3-212ENST00000502563 RNF146Q9NTX7 359 aa12.46□□□□□ -0.41
UBE2D3-212ENST00000502563 RBM27Q9P2N5 1060 aaKnown RBP12.46□□□□□ -0.41
UBE2D3-212ENST00000502563 ISY1Q9ULR0 285 aaKnown RBP12.46□□□□□ -0.41
UBE2D3-212ENST00000502563 ZNFX1Q9P2E3 1918 aaKnown RBP12.45□□□□□ -0.42
UBE2D3-212ENST00000502563 COBLO75128 1261 aa12.45□□□□□ -0.42
UBE2D3-212ENST00000502563 CYP2B6P20813 491 aa12.45□□□□□ -0.42
UBE2D3-212ENST00000502563 ANKRD1Q15327 319 aa12.45□□□□□ -0.42
UBE2D3-212ENST00000502563 SLC35G1Q2M3R5 365 aa12.45□□□□□ -0.42
UBE2D3-212ENST00000502563 WDR78Q5VTH9 848 aa12.45□□□□□ -0.42
UBE2D3-212ENST00000502563 Q6ZUG5 572 aa12.45□□□□□ -0.42
UBE2D3-212ENST00000502563 FBXO11Q86XK2 927 aa12.45□□□□□ -0.42
UBE2D3-212ENST00000502563 MCF2L2Q86YR7 1114 aa12.45□□□□□ -0.42
UBE2D3-212ENST00000502563 FAM177A1Q8N128 213 aaPredicted RBP12.45□□□□□ -0.42
UBE2D3-212ENST00000502563 ANKRD35Q8N283 1001 aa12.45□□□□□ -0.42
UBE2D3-212ENST00000502563 DNERQ8NFT8 737 aa12.45□□□□□ -0.42
UBE2D3-212ENST00000502563 MORC4Q8TE76 937 aa12.45□□□□□ -0.42
UBE2D3-212ENST00000502563 NUP133Q8WUM0 1156 aa12.45□□□□□ -0.42
UBE2D3-212ENST00000502563 CLEC4DQ8WXI8 215 aa12.45□□□□□ -0.42
UBE2D3-212ENST00000502563 UBA5Q9GZZ9 404 aa12.45□□□□□ -0.42
UBE2D3-212ENST00000502563 GPHNQ9NQX3 736 aaPredicted RBP12.45□□□□□ -0.42
UBE2D3-212ENST00000502563 CYP39A1Q9NYL5 469 aa12.45□□□□□ -0.42
UBE2D3-212ENST00000502563 BRPF3Q9ULD4 1205 aa12.45□□□□□ -0.42
UBE2D3-212ENST00000502563 MTMR7Q9Y216 660 aa12.45□□□□□ -0.42
UBE2D3-212ENST00000502563 MRPL11Q9Y3B7 192 aaKnown RBP12.45□□□□□ -0.42
UBE2D3-212ENST00000502563 KLF18A0A0U1RQI7 1052 aa12.44□□□□□ -0.42
UBE2D3-212ENST00000502563 MSCO60682 206 aa12.44□□□□□ -0.42
UBE2D3-212ENST00000502563 SEC24BO95487 1268 aa12.44□□□□□ -0.42
UBE2D3-212ENST00000502563 INHAP05111 366 aa12.44□□□□□ -0.42
UBE2D3-212ENST00000502563 GJB1P08034 283 aa12.44□□□□□ -0.42
UBE2D3-212ENST00000502563 ALAS1P13196 640 aa12.44□□□□□ -0.42
UBE2D3-212ENST00000502563 FGD1P98174 961 aa12.44□□□□□ -0.42
UBE2D3-212ENST00000502563 FUT2Q10981 343 aa12.44□□□□□ -0.42
UBE2D3-212ENST00000502563 TOB2Q14106 344 aaPredicted RBP12.44□□□□□ -0.42
UBE2D3-212ENST00000502563 RTN1Q16799 776 aa12.44□□□□□ -0.42
UBE2D3-212ENST00000502563 MFSD14CQ5VZR4 134 aa12.44□□□□□ -0.42
UBE2D3-212ENST00000502563 LHX8Q68G74 356 aa12.44□□□□□ -0.42
UBE2D3-212ENST00000502563 CCDC174Q6PII3 467 aa12.44□□□□□ -0.42
UBE2D3-212ENST00000502563 MICU3Q86XE3 530 aa12.44□□□□□ -0.42
UBE2D3-212ENST00000502563 NPLOC4Q8TAT6 608 aa12.44□□□□□ -0.42
UBE2D3-212ENST00000502563 BRF1Q92994 677 aa12.44□□□□□ -0.42
UBE2D3-212ENST00000502563 DDX11Q96FC9 970 aa12.44□□□□□ -0.42
UBE2D3-212ENST00000502563 LRRC2Q9BYS8 371 aa12.44□□□□□ -0.42
UBE2D3-212ENST00000502563 PLXNA1Q9UIW2 1896 aa12.44□□□□□ -0.42
UBE2D3-212ENST00000502563 RGS19P49795 217 aa12.43□□□□□ -0.42
UBE2D3-212ENST00000502563 METAP2P50579 478 aaKnown RBP eCLIP12.43□□□□□ -0.42
UBE2D3-212ENST00000502563 SRBD1Q8N5C6 995 aaKnown RBP12.43□□□□□ -0.42
UBE2D3-212ENST00000502563 SH3TC2Q8TF17 1288 aa12.43□□□□□ -0.42
UBE2D3-212ENST00000502563 RRP36Q96EU6 259 aaKnown RBP12.43□□□□□ -0.42
UBE2D3-212ENST00000502563 TINF2Q9BSI4 451 aa12.43□□□□□ -0.42
UBE2D3-212ENST00000502563 MYL10Q9BUA6 226 aa12.43□□□□□ -0.42
UBE2D3-212ENST00000502563 UPF2Q9HAU5 1272 aaKnown RBP12.43□□□□□ -0.42
UBE2D3-212ENST00000502563 HMX1Q9NP08 348 aaPredicted RBP12.43□□□□□ -0.42
UBE2D3-212ENST00000502563 FAM217BQ9NTX9 383 aaPredicted RBP12.43□□□□□ -0.42
UBE2D3-212ENST00000502563 ADD3Q9UEY8 706 aaKnown RBP12.43□□□□□ -0.42
UBE2D3-212ENST00000502563 BRCA2P51587 3418 aa12.43□□□□□ -0.42
UBE2D3-212ENST00000502563 MYH6P13533 1939 aa12.43□□□□□ -0.42
UBE2D3-212ENST00000502563 CNTNAP5Q8WYK1 1306 aa12.42□□□□□ -0.42
UBE2D3-212ENST00000502563 ASB14A6NK59 587 aa12.42□□□□□ -0.42
UBE2D3-212ENST00000502563 GOLGA8AA7E2F4 631 aa12.42□□□□□ -0.42
UBE2D3-212ENST00000502563 GOLGA8BA8MQT2 603 aa12.42□□□□□ -0.42
UBE2D3-212ENST00000502563 B4DLN1 442 aa12.42□□□□□ -0.42
UBE2D3-212ENST00000502563 POTEB2H3BUK9 544 aa12.42□□□□□ -0.42
UBE2D3-212ENST00000502563 PRR29P0C7W0 189 aa12.42□□□□□ -0.42
UBE2D3-212ENST00000502563 CYBAP13498 195 aa12.42□□□□□ -0.42
UBE2D3-212ENST00000502563 ELNP15502 786 aa12.42□□□□□ -0.42
UBE2D3-212ENST00000502563 PDIA3P30101 505 aaKnown RBP12.42□□□□□ -0.42
UBE2D3-212ENST00000502563 GJA8P48165 433 aa12.42□□□□□ -0.42
UBE2D3-212ENST00000502563 HSD17B4P51659 736 aa12.42□□□□□ -0.42
UBE2D3-212ENST00000502563 MRPL12P52815 198 aaKnown RBP12.42□□□□□ -0.42
UBE2D3-212ENST00000502563 MUM1L1Q5H9M0 696 aa12.42□□□□□ -0.42
UBE2D3-212ENST00000502563 PPP1R18Q6NYC8 613 aa12.42□□□□□ -0.42
UBE2D3-212ENST00000502563 CHMP4CQ96CF2 233 aa12.42□□□□□ -0.42
UBE2D3-212ENST00000502563 FGD4Q96M96 766 aa12.42□□□□□ -0.42
UBE2D3-212ENST00000502563 TCEANC2Q96MN5 208 aa12.42□□□□□ -0.42
UBE2D3-212ENST00000502563 PIGSQ96S52 555 aa12.42□□□□□ -0.42
UBE2D3-212ENST00000502563 TMEM106CQ9BVX2 250 aa12.42□□□□□ -0.42
UBE2D3-212ENST00000502563 CRISPLD2Q9H0B8 497 aa12.42□□□□□ -0.42
UBE2D3-212ENST00000502563 CPVLQ9H3G5 476 aa12.42□□□□□ -0.42
UBE2D3-212ENST00000502563 PDRG1Q9NUG6 133 aa12.42□□□□□ -0.42
UBE2D3-212ENST00000502563 FLRT1Q9NZU1 646 aa12.42□□□□□ -0.42
UBE2D3-212ENST00000502563 SEC63Q9UGP8 760 aaKnown RBP12.42□□□□□ -0.42
UBE2D3-212ENST00000502563 PCDHA1Q9Y5I3 950 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms