RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 A1CFQ9NQ94 594 aaKnown RBP8.49□□□□□ -1.05
USP46-203ENST00000502443 NAP1L2Q9ULW6 460 aaPredicted RBP8.49□□□□□ -1.05
USP46-203ENST00000502443 DIS3Q9Y2L1 958 aaKnown RBP8.49□□□□□ -1.05
USP46-203ENST00000502443 BAZ2BQ9UIF8 2168 aaKnown RBP8.49□□□□□ -1.05
USP46-203ENST00000502443 PFASO15067 1338 aa8.49□□□□□ -1.05
USP46-203ENST00000502443 RBBP6Q7Z6E9 1792 aaKnown RBP8.48□□□□□ -1.05
USP46-203ENST00000502443 KIAA0100Q14667 2235 aaKnown RBP8.48□□□□□ -1.05
USP46-203ENST00000502443 KLF18A0A0U1RQI7 1052 aa8.48□□□□□ -1.05
USP46-203ENST00000502443 PTPDC1A2A3K4 754 aa8.48□□□□□ -1.05
USP46-203ENST00000502443 POTEB2H3BUK9 544 aa8.48□□□□□ -1.05
USP46-203ENST00000502443 NFIBO00712 420 aa8.48□□□□□ -1.05
USP46-203ENST00000502443 ZBTB5O15062 677 aa8.48□□□□□ -1.05
USP46-203ENST00000502443 ZBTB43O43298 467 aa8.48□□□□□ -1.05
USP46-203ENST00000502443 CYTH3O43739 400 aa8.48□□□□□ -1.05
USP46-203ENST00000502443 SEC24BO95487 1268 aa8.48□□□□□ -1.05
USP46-203ENST00000502443 GJB1P08034 283 aa8.48□□□□□ -1.05
USP46-203ENST00000502443 CNGA1P29973 690 aa8.48□□□□□ -1.05
USP46-203ENST00000502443 CCND3P30281 292 aaPredicted RBP8.48□□□□□ -1.05
USP46-203ENST00000502443 GNAQP50148 359 aa8.48□□□□□ -1.05
USP46-203ENST00000502443 CNTN2Q02246 1040 aa8.48□□□□□ -1.05
USP46-203ENST00000502443 BAATQ14032 418 aaPredicted RBP8.48□□□□□ -1.05
USP46-203ENST00000502443 Q6ZUG5 572 aa8.48□□□□□ -1.05
USP46-203ENST00000502443 RUFY3Q7L099 469 aa8.48□□□□□ -1.05
USP46-203ENST00000502443 FBXO11Q86XK2 927 aa8.48□□□□□ -1.05
USP46-203ENST00000502443 POTEDQ86YR6 584 aa8.48□□□□□ -1.05
USP46-203ENST00000502443 CCDC82Q8N4S0 544 aa8.48□□□□□ -1.05
USP46-203ENST00000502443 FANCBQ8NB91 859 aa8.48□□□□□ -1.05
USP46-203ENST00000502443 U2AF1L4Q8WU68 220 aaKnown RBP8.48□□□□□ -1.05
USP46-203ENST00000502443 CLEC4DQ8WXI8 215 aa8.48□□□□□ -1.05
USP46-203ENST00000502443 PIBF1Q8WXW3 757 aa8.48□□□□□ -1.05
USP46-203ENST00000502443 MTMR8Q96EF0 704 aa8.48□□□□□ -1.05
USP46-203ENST00000502443 PIGSQ96S52 555 aa8.48□□□□□ -1.05
USP46-203ENST00000502443 LZTS2Q9BRK4 669 aa8.48□□□□□ -1.05
USP46-203ENST00000502443 TINF2Q9BSI4 451 aa8.48□□□□□ -1.05
USP46-203ENST00000502443 AMNQ9BXJ7 453 aa8.48□□□□□ -1.05
USP46-203ENST00000502443 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.48□□□□□ -1.05
USP46-203ENST00000502443 RIOX1Q9H6W3 641 aa8.48□□□□□ -1.05
USP46-203ENST00000502443 ZSWIM6Q9HCJ5 1215 aa8.48□□□□□ -1.05
USP46-203ENST00000502443 PAK6Q9NQU5 681 aaPredicted RBP8.48□□□□□ -1.05
USP46-203ENST00000502443 CYP39A1Q9NYL5 469 aa8.48□□□□□ -1.05
USP46-203ENST00000502443 BRPF3Q9ULD4 1205 aa8.48□□□□□ -1.05
USP46-203ENST00000502443 CYP46A1Q9Y6A2 500 aa8.48□□□□□ -1.05
USP46-203ENST00000502443 ABCB11O95342 1321 aa8.48□□□□□ -1.05
USP46-203ENST00000502443 PNMA6FA0A0J9YX94 578 aa8.47□□□□□ -1.05
USP46-203ENST00000502443 PLEKHA8P1O95397 391 aa8.47□□□□□ -1.05
USP46-203ENST00000502443 SGPL1O95470 568 aa8.47□□□□□ -1.05
USP46-203ENST00000502443 IGHA2P01877 340 aa8.47□□□□□ -1.05
USP46-203ENST00000502443 TFRCP02786 760 aaKnown RBP8.47□□□□□ -1.05
USP46-203ENST00000502443 CYBAP13498 195 aa8.47□□□□□ -1.05
USP46-203ENST00000502443 CALML3P27482 149 aa8.47□□□□□ -1.05
USP46-203ENST00000502443 SMARCA1P28370 1054 aa8.47□□□□□ -1.05
USP46-203ENST00000502443 GJA8P48165 433 aa8.47□□□□□ -1.05
USP46-203ENST00000502443 APOBRQ0VD83 1088 aa8.47□□□□□ -1.05
USP46-203ENST00000502443 SLC35G1Q2M3R5 365 aa8.47□□□□□ -1.05
USP46-203ENST00000502443 PRAMEF19Q5SWL8 479 aa8.47□□□□□ -1.05
USP46-203ENST00000502443 RNF207Q6ZRF8 634 aa8.47□□□□□ -1.05
USP46-203ENST00000502443 ZNF467Q7Z7K2 595 aaPredicted RBP8.47□□□□□ -1.05
USP46-203ENST00000502443 CMTR1Q8N1G2 835 aaKnown RBP8.47□□□□□ -1.05
USP46-203ENST00000502443 SRBD1Q8N5C6 995 aaKnown RBP8.47□□□□□ -1.05
USP46-203ENST00000502443 FAM133AQ8N9E0 248 aa8.47□□□□□ -1.05
USP46-203ENST00000502443 TRPV1Q8NER1 839 aa8.47□□□□□ -1.05
USP46-203ENST00000502443 BRF1Q92994 677 aa8.47□□□□□ -1.05
USP46-203ENST00000502443 RRP36Q96EU6 259 aaKnown RBP8.47□□□□□ -1.05
USP46-203ENST00000502443 PURBQ96QR8 312 aaKnown RBP8.47□□□□□ -1.05
USP46-203ENST00000502443 SPZ1Q9BXG8 430 aa8.47□□□□□ -1.05
USP46-203ENST00000502443 UPF3BQ9BZI7 483 aaKnown RBP8.47□□□□□ -1.05
USP46-203ENST00000502443 TM6SF1Q9BZW5 370 aa8.47□□□□□ -1.05
USP46-203ENST00000502443 SEC63Q9UGP8 760 aaKnown RBP8.47□□□□□ -1.05
USP46-203ENST00000502443 CNPY2Q9Y2B0 182 aa8.47□□□□□ -1.05
USP46-203ENST00000502443 MRPL11Q9Y3B7 192 aaKnown RBP8.47□□□□□ -1.05
USP46-203ENST00000502443 PCDHA1Q9Y5I3 950 aa8.47□□□□□ -1.05
USP46-203ENST00000502443 BRCA2P51587 3418 aa8.47□□□□□ -1.05
USP46-203ENST00000502443 MCM3APO60318 1980 aa8.46□□□□□ -1.05
USP46-203ENST00000502443 SOWAHBA6NEL2 793 aa8.46□□□□□ -1.06
USP46-203ENST00000502443 GOLGA8AA7E2F4 631 aa8.46□□□□□ -1.06
USP46-203ENST00000502443 GOLGA8BA8MQT2 603 aa8.46□□□□□ -1.06
USP46-203ENST00000502443 PPP1R11O60927 126 aaPredicted RBP8.46□□□□□ -1.06
USP46-203ENST00000502443 RGS19P49795 217 aa8.46□□□□□ -1.06
USP46-203ENST00000502443 ANAPC15P60006 121 aa8.46□□□□□ -1.06
USP46-203ENST00000502443 RPS6P62753 249 aaKnown RBP8.46□□□□□ -1.06
USP46-203ENST00000502443 TRAF1Q13077 416 aa8.46□□□□□ -1.06
USP46-203ENST00000502443 RTN1Q16799 776 aa8.46□□□□□ -1.06
USP46-203ENST00000502443 C8orf34Q49A92 452 aa8.46□□□□□ -1.06
USP46-203ENST00000502443 MAMDC4Q6UXC1 1216 aa8.46□□□□□ -1.06
USP46-203ENST00000502443 SLC30A10Q6XR72 485 aa8.46□□□□□ -1.06
USP46-203ENST00000502443 TMTC3Q6ZXV5 915 aa8.46□□□□□ -1.06
USP46-203ENST00000502443 MCF2L2Q86YR7 1114 aa8.46□□□□□ -1.06
USP46-203ENST00000502443 FBXL16Q8N461 479 aa8.46□□□□□ -1.06
USP46-203ENST00000502443 MSL3Q8N5Y2 521 aaKnown RBP8.46□□□□□ -1.06
USP46-203ENST00000502443 SHISA4Q96DD7 197 aa8.46□□□□□ -1.06
USP46-203ENST00000502443 FGD4Q96M96 766 aa8.46□□□□□ -1.06
USP46-203ENST00000502443 RBM28Q9NW13 759 aaKnown RBP8.46□□□□□ -1.06
USP46-203ENST00000502443 SYNGAP1Q96PV0 1343 aa8.46□□□□□ -1.06
USP46-203ENST00000502443 LCTP09848 1927 aa8.45□□□□□ -1.06
USP46-203ENST00000502443 hCG_1642624A0A1W2PR95 340 aa8.45□□□□□ -1.06
USP46-203ENST00000502443 ASB14A6NK59 587 aa8.45□□□□□ -1.06
USP46-203ENST00000502443 SEPT4O43236 478 aa8.45□□□□□ -1.06
USP46-203ENST00000502443 MSCO60682 206 aa8.45□□□□□ -1.06
USP46-203ENST00000502443 SNAI1O95863 264 aaPredicted RBP8.45□□□□□ -1.06
USP46-203ENST00000502443 CFBP00751 764 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms