RNA–Protein interactions for RNA: ENST00000502357.5

LMNA-218, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-218ENST00000502357 Q9Y3F1 56 aa15.14■□□□□ 0.01
LMNA-218ENST00000502357 EPOPA6NHQ4 379 aa15.13■□□□□ 0.01
LMNA-218ENST00000502357 SMARCA5O60264 1052 aaPredicted RBP15.13■□□□□ 0.01
LMNA-218ENST00000502357 ARHGEF15O94989 841 aa15.13■□□□□ 0.01
LMNA-218ENST00000502357 PSMC6P62333 389 aa15.13■□□□□ 0.01
LMNA-218ENST00000502357 FSCN1Q16658 493 aaKnown RBP15.13■□□□□ 0.01
LMNA-218ENST00000502357 LRRC47Q8N1G4 583 aaKnown RBP15.13■□□□□ 0.01
LMNA-218ENST00000502357 DDRGK1Q96HY6 314 aa15.13■□□□□ 0.01
LMNA-218ENST00000502357 SCLYQ96I15 445 aa15.13■□□□□ 0.01
LMNA-218ENST00000502357 PURBQ96QR8 312 aaKnown RBP15.13■□□□□ 0.01
LMNA-218ENST00000502357 ACAD9Q9H845 621 aa15.13■□□□□ 0.01
LMNA-218ENST00000502357 MKNK2Q9HBH9 465 aa15.13■□□□□ 0.01
LMNA-218ENST00000502357 COG6Q9Y2V7 657 aa15.13■□□□□ 0.01
LMNA-218ENST00000502357 PCDHA11Q9Y5I1 949 aa15.13■□□□□ 0.01
LMNA-218ENST00000502357 TET1Q8NFU7 2136 aa15.13■□□□□ 0.01
LMNA-218ENST00000502357 SCN10AQ9Y5Y9 1956 aa15.13■□□□□ 0.01
LMNA-218ENST00000502357 MINDY4BA8MYZ0 360 aa15.12■□□□□ 0.01
LMNA-218ENST00000502357 M0R2C6 588 aa15.12■□□□□ 0.01
LMNA-218ENST00000502357 RFXAPO00287 272 aa15.12■□□□□ 0.01
LMNA-218ENST00000502357 FOXP2O15409 715 aa15.12■□□□□ 0.01
LMNA-218ENST00000502357 DYNC1LI2O43237 492 aaPredicted RBP15.12■□□□□ 0.01
LMNA-218ENST00000502357 PLA2G6O60733 806 aa15.12■□□□□ 0.01
LMNA-218ENST00000502357 HMMRO75330 724 aa15.12■□□□□ 0.01
LMNA-218ENST00000502357 TTLL1O95922 423 aa15.12■□□□□ 0.01
LMNA-218ENST00000502357 BMP3P12645 472 aa15.12■□□□□ 0.01
LMNA-218ENST00000502357 KCNQ1P51787 676 aa15.12■□□□□ 0.01
LMNA-218ENST00000502357 TTLL4Q14679 1199 aa15.12■□□□□ 0.01
LMNA-218ENST00000502357 MUM1L1Q5H9M0 696 aa15.12■□□□□ 0.01
LMNA-218ENST00000502357 SLFN13Q68D06 897 aa15.12■□□□□ 0.01
LMNA-218ENST00000502357 ZSCAN25Q6NSZ9 544 aa15.12■□□□□ 0.01
LMNA-218ENST00000502357 KBTBD3Q8NAB2 608 aa15.12■□□□□ 0.01
LMNA-218ENST00000502357 APPBP2Q92624 585 aa15.12■□□□□ 0.01
LMNA-218ENST00000502357 GMCL1Q96IK5 515 aa15.12■□□□□ 0.01
LMNA-218ENST00000502357 SEZ6LQ9BYH1 1024 aa15.12■□□□□ 0.01
LMNA-218ENST00000502357 HOMER2Q9NSB8 354 aa15.12■□□□□ 0.01
LMNA-218ENST00000502357 CYP39A1Q9NYL5 469 aa15.12■□□□□ 0.01
LMNA-218ENST00000502357 MTCH2Q9Y6C9 303 aa15.12■□□□□ 0.01
LMNA-218ENST00000502357 PTPRSQ13332 1948 aa15.11■□□□□ 0.01
LMNA-218ENST00000502357 TMEM232C9JQI7 657 aa15.11■□□□□ 0.01
LMNA-218ENST00000502357 ERC2O15083 957 aa15.11■□□□□ 0.01
LMNA-218ENST00000502357 GPAA1O43292 621 aa15.11■□□□□ 0.01
LMNA-218ENST00000502357 FDX1P10109 184 aa15.11■□□□□ 0.01
LMNA-218ENST00000502357 HOXD11P31277 338 aaPredicted RBP15.11■□□□□ 0.01
LMNA-218ENST00000502357 NOVP48745 357 aa15.11■□□□□ 0.01
LMNA-218ENST00000502357 IQSEC1Q6DN90 963 aa15.11■□□□□ 0.01
LMNA-218ENST00000502357 RASGRP2Q7LDG7 609 aa15.11■□□□□ 0.01
LMNA-218ENST00000502357 STAG1Q8WVM7 1258 aa15.11■□□□□ 0.01
LMNA-218ENST00000502357 ALDH8A1Q9H2A2 487 aaPredicted RBP15.11■□□□□ 0.01
LMNA-218ENST00000502357 RNF146Q9NTX7 359 aa15.11■□□□□ 0.01
LMNA-218ENST00000502357 ASB14A6NK59 587 aa15.1■□□□□ 0.01
LMNA-218ENST00000502357 FBXO16Q8IX29 292 aaPredicted RBP15.1■□□□□ 0.01
LMNA-218ENST00000502357 IFNL3Q8IZI9 196 aa15.1■□□□□ 0.01
LMNA-218ENST00000502357 TRERF1Q96PN7 1200 aa15.1■□□□□ 0.01
LMNA-218ENST00000502357 BCL11AQ9H165 835 aa15.1■□□□□ 0.01
LMNA-218ENST00000502357 DDX19BQ9UMR2 479 aa15.1■□□□□ 0.01
LMNA-218ENST00000502357 SLC4A7Q9Y6M7 1214 aa15.1■□□□□ 0.01
LMNA-218ENST00000502357 RBM47A0AV96 593 aaKnown RBP15.09■□□□□ 0.01
LMNA-218ENST00000502357 PATL2C9JE40 543 aaKnown RBP15.09■□□□□ 0.01
LMNA-218ENST00000502357 RNF113AO15541 343 aaKnown RBP15.09■□□□□ 0.01
LMNA-218ENST00000502357 TLL1O43897 1013 aa15.09■□□□□ 0.01
LMNA-218ENST00000502357 CYP2C9P11712 490 aa15.09■□□□□ 0.01
LMNA-218ENST00000502357 STAT2P52630 851 aa15.09■□□□□ 0.01
LMNA-218ENST00000502357 SNAP25P60880 206 aa15.09■□□□□ 0.01
LMNA-218ENST00000502357 HNRNPUQ00839 825 aaKnown RBP eCLIP15.09■□□□□ 0.01
LMNA-218ENST00000502357 TKFCQ3LXA3 575 aa15.09■□□□□ 0.01
LMNA-218ENST00000502357 PPP2R2DQ66LE6 453 aa15.09■□□□□ 0.01
LMNA-218ENST00000502357 KRT40Q6A162 431 aa15.09■□□□□ 0.01
LMNA-218ENST00000502357 SPRED2Q7Z698 418 aa15.09■□□□□ 0.01
LMNA-218ENST00000502357 ZNF444Q8N0Y2 327 aaPredicted RBP15.09■□□□□ 0.01
LMNA-218ENST00000502357 KHSRPQ92945 711 aaKnown RBP eCLIP15.09■□□□□ 0.01
LMNA-218ENST00000502357 LRRCC1Q9C099 1032 aa15.09■□□□□ 0.01
LMNA-218ENST00000502357 MTIF3Q9H2K0 278 aaKnown RBP15.09■□□□□ 0.01
LMNA-218ENST00000502357 EPHX3Q9H6B9 360 aa15.09■□□□□ 0.01
LMNA-218ENST00000502357 IL17RBQ9NRM6 502 aa15.09■□□□□ 0.01
LMNA-218ENST00000502357 ECHDC1Q9NTX5 307 aa15.09■□□□□ 0.01
LMNA-218ENST00000502357 TRMT13Q9NUP7 481 aaKnown RBP15.09■□□□□ 0.01
LMNA-218ENST00000502357 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.09■□□□□ 0.01
LMNA-218ENST00000502357 LPXNO60711 386 aa15.08■□□□□ 0
LMNA-218ENST00000502357 CA3P07451 260 aa15.08■□□□□ 0
LMNA-218ENST00000502357 ATP2A2P16615 1042 aaKnown RBP15.08■□□□□ 0
LMNA-218ENST00000502357 MCCP23508 829 aa15.08■□□□□ 0
LMNA-218ENST00000502357 PURAQ00577 322 aaKnown RBP15.08■□□□□ 0
LMNA-218ENST00000502357 GPNMBQ14956 572 aa15.08■□□□□ 0
LMNA-218ENST00000502357 DUSP28Q4G0W2 176 aa15.08■□□□□ 0
LMNA-218ENST00000502357 TSHZ3Q63HK5 1081 aa15.08■□□□□ 0
LMNA-218ENST00000502357 EEPD1Q7L9B9 569 aa15.08■□□□□ 0
LMNA-218ENST00000502357 FAM160B2Q86V87 743 aa15.08■□□□□ 0
LMNA-218ENST00000502357 RPUSD2Q8IZ73 545 aaKnown RBP15.08■□□□□ 0
LMNA-218ENST00000502357 SEC62Q99442 399 aaKnown RBP15.08■□□□□ 0
LMNA-218ENST00000502357 C11orf16Q9NQ32 467 aa15.08■□□□□ 0
LMNA-218ENST00000502357 PRR12Q9ULL5 1215 aa15.08■□□□□ 0
LMNA-218ENST00000502357 BRWD1Q9NSI6 2320 aa15.08■□□□□ 0
LMNA-218ENST00000502357 RBAK-RBAKDNI3L0D1 243 aa15.07■□□□□ 0
LMNA-218ENST00000502357 GNAT2P19087 354 aa15.07■□□□□ 0
LMNA-218ENST00000502357 TFAP4Q01664 338 aa15.07■□□□□ 0
LMNA-218ENST00000502357 RCSD1Q6JBY9 416 aa15.07■□□□□ 0
LMNA-218ENST00000502357 CHURC1Q8WUH1 139 aa15.07■□□□□ 0
LMNA-218ENST00000502357 CTAGE1Q96RT6 745 aa15.07■□□□□ 0
LMNA-218ENST00000502357 AP5M1Q9H0R1 490 aa15.07■□□□□ 0
LMNA-218ENST00000502357 VTA1Q9NP79 307 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms