RNA–Protein interactions for RNA: ENST00000498500.1

THBS3-209, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 768 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-209ENST00000498500 RWDD1Q9H446 243 aaPredicted RBP14.33□□□□□ -0.12
THBS3-209ENST00000498500 NYAP2Q9P242 653 aa14.33□□□□□ -0.12
THBS3-209ENST00000498500 ARPP21Q9UBL0 812 aaPredicted RBP14.33□□□□□ -0.12
THBS3-209ENST00000498500 CLIP2Q9UDT6 1046 aa14.33□□□□□ -0.12
THBS3-209ENST00000498500 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.32□□□□□ -0.12
THBS3-209ENST00000498500 M0R2C6 588 aa14.32□□□□□ -0.12
THBS3-209ENST00000498500 CTAGE5O15320 804 aa14.32□□□□□ -0.12
THBS3-209ENST00000498500 RNF113AO15541 343 aaKnown RBP14.32□□□□□ -0.12
THBS3-209ENST00000498500 MYOGP15173 224 aa14.32□□□□□ -0.12
THBS3-209ENST00000498500 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.32□□□□□ -0.12
THBS3-209ENST00000498500 SLC43A3Q8NBI5 491 aa14.32□□□□□ -0.12
THBS3-209ENST00000498500 AP5M1Q9H0R1 490 aa14.32□□□□□ -0.12
THBS3-209ENST00000498500 SLC38A10Q9HBR0 1119 aa14.32□□□□□ -0.12
THBS3-209ENST00000498500 HOMER2Q9NSB8 354 aa14.32□□□□□ -0.12
THBS3-209ENST00000498500 PRRC2BQ5JSZ5 2229 aaKnown RBP14.31□□□□□ -0.12
THBS3-209ENST00000498500 XIRP2A4UGR9 3374 aa14.31□□□□□ -0.12
THBS3-209ENST00000498500 SCN5AQ14524 2016 aa14.31□□□□□ -0.12
THBS3-209ENST00000498500 ZEB2O60315 1214 aa14.31□□□□□ -0.12
THBS3-209ENST00000498500 ZFYP08048 801 aaPredicted RBP14.31□□□□□ -0.12
THBS3-209ENST00000498500 RASA1P20936 1047 aa14.31□□□□□ -0.12
THBS3-209ENST00000498500 KCNQ1P51787 676 aa14.31□□□□□ -0.12
THBS3-209ENST00000498500 NKX3-2P78367 333 aa14.31□□□□□ -0.12
THBS3-209ENST00000498500 CNTN2Q02246 1040 aa14.31□□□□□ -0.12
THBS3-209ENST00000498500 NUCB1Q02818 461 aa14.31□□□□□ -0.12
THBS3-209ENST00000498500 FSCN1Q16658 493 aaKnown RBP14.31□□□□□ -0.12
THBS3-209ENST00000498500 TLK2Q86UE8 772 aa14.31□□□□□ -0.12
THBS3-209ENST00000498500 STRBPQ96SI9 672 aaKnown RBP14.31□□□□□ -0.12
THBS3-209ENST00000498500 NOC4LQ9BVI4 516 aaKnown RBP14.31□□□□□ -0.12
THBS3-209ENST00000498500 KATNBL1Q9H079 304 aa14.31□□□□□ -0.12
THBS3-209ENST00000498500 TRPV6Q9H1D0 765 aa14.31□□□□□ -0.12
THBS3-209ENST00000498500 EPB41L4AQ9HCS5 686 aaPredicted RBP14.31□□□□□ -0.12
THBS3-209ENST00000498500 FEM1BQ9UK73 627 aa14.31□□□□□ -0.12
THBS3-209ENST00000498500 PCDHA11Q9Y5I1 949 aa14.31□□□□□ -0.12
THBS3-209ENST00000498500 BDP1A6H8Y1 2624 aa14.31□□□□□ -0.12
THBS3-209ENST00000498500 MINDY4BA8MYZ0 360 aa14.3□□□□□ -0.12
THBS3-209ENST00000498500 DYNC1LI2O43237 492 aaPredicted RBP14.3□□□□□ -0.12
THBS3-209ENST00000498500 GTPBP6O43824 516 aaPredicted RBP14.3□□□□□ -0.12
THBS3-209ENST00000498500 B4GALT4O60513 344 aa14.3□□□□□ -0.12
THBS3-209ENST00000498500 ATP2A2P16615 1042 aaKnown RBP14.3□□□□□ -0.12
THBS3-209ENST00000498500 OAZ1P54368 228 aa14.3□□□□□ -0.12
THBS3-209ENST00000498500 B4GALNT3Q6L9W6 998 aa14.3□□□□□ -0.12
THBS3-209ENST00000498500 CHD1LQ86WJ1 897 aa14.3□□□□□ -0.12
THBS3-209ENST00000498500 SCLYQ96I15 445 aa14.3□□□□□ -0.12
THBS3-209ENST00000498500 FSD1Q9BTV5 496 aa14.3□□□□□ -0.12
THBS3-209ENST00000498500 SEZ6LQ9BYH1 1024 aa14.3□□□□□ -0.12
THBS3-209ENST00000498500 WNT8AQ9H1J5 351 aa14.3□□□□□ -0.12
THBS3-209ENST00000498500 ACAD9Q9H845 621 aa14.3□□□□□ -0.12
THBS3-209ENST00000498500 ZBTB47Q9UFB7 747 aaPredicted RBP14.3□□□□□ -0.12
THBS3-209ENST00000498500 ISY1Q9ULR0 285 aaKnown RBP14.3□□□□□ -0.12
THBS3-209ENST00000498500 ASTN1O14525 1302 aa14.3□□□□□ -0.12
THBS3-209ENST00000498500 ASB14A6NK59 587 aa14.29□□□□□ -0.12
THBS3-209ENST00000498500 GSG1L2A8MUP6 293 aa14.29□□□□□ -0.12
THBS3-209ENST00000498500 GPAA1O43292 621 aa14.29□□□□□ -0.12
THBS3-209ENST00000498500 ZMYM1Q5SVZ6 1142 aa14.29□□□□□ -0.12
THBS3-209ENST00000498500 ZNF444Q8N0Y2 327 aaPredicted RBP14.29□□□□□ -0.12
THBS3-209ENST00000498500 FAM133AQ8N9E0 248 aa14.29□□□□□ -0.12
THBS3-209ENST00000498500 SEC62Q99442 399 aaKnown RBP14.29□□□□□ -0.12
THBS3-209ENST00000498500 GNEQ9Y223 722 aaKnown RBP14.29□□□□□ -0.12
THBS3-209ENST00000498500 HCN4Q9Y3Q4 1203 aa14.29□□□□□ -0.12
THBS3-209ENST00000498500 GRIN2DO15399 1336 aa14.29□□□□□ -0.12
THBS3-209ENST00000498500 LRRC37A2A6NM11 1700 aa14.29□□□□□ -0.12
THBS3-209ENST00000498500 RFXAPO00287 272 aa14.28□□□□□ -0.12
THBS3-209ENST00000498500 HOXD11P31277 338 aaPredicted RBP14.28□□□□□ -0.12
THBS3-209ENST00000498500 PSMC6P62333 389 aa14.28□□□□□ -0.12
THBS3-209ENST00000498500 LAMA4Q16363 1823 aa14.28□□□□□ -0.12
THBS3-209ENST00000498500 SBK1Q52WX2 424 aa14.28□□□□□ -0.12
THBS3-209ENST00000498500 TMEM67Q5HYA8 995 aa14.28□□□□□ -0.12
THBS3-209ENST00000498500 PLEKHM2Q8IWE5 1019 aa14.28□□□□□ -0.12
THBS3-209ENST00000498500 LRRC47Q8N1G4 583 aaKnown RBP14.28□□□□□ -0.12
THBS3-209ENST00000498500 LRFN3Q9BTN0 628 aa14.28□□□□□ -0.12
THBS3-209ENST00000498500 CERS4Q9HA82 394 aa14.28□□□□□ -0.12
THBS3-209ENST00000498500 SOWAHBA6NEL2 793 aa14.27□□□□□ -0.13
THBS3-209ENST00000498500 FOXP2O15409 715 aa14.27□□□□□ -0.13
THBS3-209ENST00000498500 CA3P07451 260 aa14.27□□□□□ -0.13
THBS3-209ENST00000498500 FDX1P10109 184 aa14.27□□□□□ -0.13
THBS3-209ENST00000498500 BMP3P12645 472 aa14.27□□□□□ -0.13
THBS3-209ENST00000498500 SMPD1P17405 629 aa14.27□□□□□ -0.13
THBS3-209ENST00000498500 PTGS1P23219 599 aa14.27□□□□□ -0.13
THBS3-209ENST00000498500 IKQ13123 557 aaPredicted RBP14.27□□□□□ -0.13
THBS3-209ENST00000498500 SLFN13Q68D06 897 aa14.27□□□□□ -0.13
THBS3-209ENST00000498500 EEPD1Q7L9B9 569 aa14.27□□□□□ -0.13
THBS3-209ENST00000498500 DEFB128Q7Z7B8 93 aa14.27□□□□□ -0.13
THBS3-209ENST00000498500 MKL1Q969V6 931 aa14.27□□□□□ -0.13
THBS3-209ENST00000498500 EVI5LQ96CN4 794 aa14.27□□□□□ -0.13
THBS3-209ENST00000498500 CEP95Q96GE4 821 aa14.27□□□□□ -0.13
THBS3-209ENST00000498500 AGBL1Q96MI9 1066 aa14.27□□□□□ -0.13
THBS3-209ENST00000498500 OSBPL3Q9H4L5 887 aa14.27□□□□□ -0.13
THBS3-209ENST00000498500 EPHX3Q9H6B9 360 aa14.27□□□□□ -0.13
THBS3-209ENST00000498500 ZNF287Q9HBT7 754 aa14.27□□□□□ -0.13
THBS3-209ENST00000498500 A1CFQ9NQ94 594 aaKnown RBP14.27□□□□□ -0.13
THBS3-209ENST00000498500 RNF146Q9NTX7 359 aa14.27□□□□□ -0.13
THBS3-209ENST00000498500 COG5Q9UP83 839 aa14.27□□□□□ -0.13
THBS3-209ENST00000498500 MTCH2Q9Y6C9 303 aa14.27□□□□□ -0.13
THBS3-209ENST00000498500 TRIP12Q14669 1992 aaPredicted RBP14.26□□□□□ -0.13
THBS3-209ENST00000498500 IGKV6D-41A0A0C4DH26 115 aa14.26□□□□□ -0.13
THBS3-209ENST00000498500 TMEM232C9JQI7 657 aa14.26□□□□□ -0.13
THBS3-209ENST00000498500 PRDM1O75626 825 aa14.26□□□□□ -0.13
THBS3-209ENST00000498500 TTLL1O95922 423 aa14.26□□□□□ -0.13
THBS3-209ENST00000498500 PFKMP08237 780 aa14.26□□□□□ -0.13
THBS3-209ENST00000498500 ACTN1P12814 892 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms