RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 MYBL2P10244 700 aa10.65□□□□□ -0.7
SNX13-212ENST00000498463 DRD2P14416 443 aa10.65□□□□□ -0.7
SNX13-212ENST00000498463 ERVK-21P61565 698 aa10.65□□□□□ -0.7
SNX13-212ENST00000498463 SNW1Q13573 536 aaKnown RBP10.65□□□□□ -0.7
SNX13-212ENST00000498463 ATP13A4Q4VNC1 1196 aa10.65□□□□□ -0.7
SNX13-212ENST00000498463 KIAA1211Q6ZU35 1233 aa10.65□□□□□ -0.7
SNX13-212ENST00000498463 TPH2Q8IWU9 490 aa10.65□□□□□ -0.7
SNX13-212ENST00000498463 DTWD1Q8N5C7 304 aa10.65□□□□□ -0.7
SNX13-212ENST00000498463 IGSF22Q8N9C0 903 aa10.65□□□□□ -0.7
SNX13-212ENST00000498463 KREMEN2Q8NCW0 462 aa10.65□□□□□ -0.7
SNX13-212ENST00000498463 ARPC5LQ9BPX5 153 aa10.65□□□□□ -0.7
SNX13-212ENST00000498463 FAM105AQ9NUU6 356 aa10.65□□□□□ -0.7
SNX13-212ENST00000498463 GFOD1Q9NXC2 390 aa10.65□□□□□ -0.7
SNX13-212ENST00000498463 PRR13Q9NZ81 148 aa10.65□□□□□ -0.7
SNX13-212ENST00000498463 IFRD1O00458 451 aaPredicted RBP10.64□□□□□ -0.71
SNX13-212ENST00000498463 GAS7O60861 476 aa10.64□□□□□ -0.71
SNX13-212ENST00000498463 VAMP4O75379 141 aa10.64□□□□□ -0.71
SNX13-212ENST00000498463 ASPAP45381 313 aa10.64□□□□□ -0.71
SNX13-212ENST00000498463 COL9A3Q14050 684 aaPredicted RBP10.64□□□□□ -0.71
SNX13-212ENST00000498463 INAVAQ3KP66 663 aa10.64□□□□□ -0.71
SNX13-212ENST00000498463 CDH24Q86UP0 819 aa10.64□□□□□ -0.71
SNX13-212ENST00000498463 FUBP3Q96I24 572 aaKnown RBP eCLIP10.64□□□□□ -0.71
SNX13-212ENST00000498463 GPR101Q96P66 508 aaPredicted RBP10.64□□□□□ -0.71
SNX13-212ENST00000498463 PHF20Q9BVI0 1012 aa10.64□□□□□ -0.71
SNX13-212ENST00000498463 SLC13A1Q9BZW2 595 aa10.64□□□□□ -0.71
SNX13-212ENST00000498463 TCF7L1Q9HCS4 588 aa10.64□□□□□ -0.71
SNX13-212ENST00000498463 EMC7Q9NPA0 242 aa10.64□□□□□ -0.71
SNX13-212ENST00000498463 SF3B6Q9Y3B4 125 aaKnown RBP10.64□□□□□ -0.71
SNX13-212ENST00000498463 ACTL7BQ9Y614 415 aa10.64□□□□□ -0.71
SNX13-212ENST00000498463 ARVCFO00192 962 aa10.63□□□□□ -0.71
SNX13-212ENST00000498463 PPFIA4O75335 1185 aa10.63□□□□□ -0.71
SNX13-212ENST00000498463 SNUPNO95149 360 aaKnown RBP10.63□□□□□ -0.71
SNX13-212ENST00000498463 TIAF1O95411 115 aa10.63□□□□□ -0.71
SNX13-212ENST00000498463 MT-CO1P00395 513 aa10.63□□□□□ -0.71
SNX13-212ENST00000498463 U2AF1L5P0DN76 240 aaPredicted RBP10.63□□□□□ -0.71
SNX13-212ENST00000498463 ITIH2P19823 946 aa10.63□□□□□ -0.71
SNX13-212ENST00000498463 ETV3P41162 512 aa10.63□□□□□ -0.71
SNX13-212ENST00000498463 LSSP48449 732 aa10.63□□□□□ -0.71
SNX13-212ENST00000498463 DGKGP49619 791 aa10.63□□□□□ -0.71
SNX13-212ENST00000498463 PURAQ00577 322 aaKnown RBP10.63□□□□□ -0.71
SNX13-212ENST00000498463 U2AF1Q01081 240 aaKnown RBP eCLIP10.63□□□□□ -0.71
SNX13-212ENST00000498463 SCRN1Q12765 414 aa10.63□□□□□ -0.71
SNX13-212ENST00000498463 DHX8Q14562 1220 aaKnown RBP10.63□□□□□ -0.71
SNX13-212ENST00000498463 DPY19L1Q2PZI1 675 aa10.63□□□□□ -0.71
SNX13-212ENST00000498463 ACAD11Q709F0 780 aa10.63□□□□□ -0.71
SNX13-212ENST00000498463 PPIL6Q8IXY8 311 aa10.63□□□□□ -0.71
SNX13-212ENST00000498463 FBXO41Q8TF61 875 aa10.63□□□□□ -0.71
SNX13-212ENST00000498463 DSCC1Q9BVC3 393 aa10.63□□□□□ -0.71
SNX13-212ENST00000498463 WDR64B1ANS9 1081 aa10.62□□□□□ -0.71
SNX13-212ENST00000498463 PAX3P23760 479 aa10.62□□□□□ -0.71
SNX13-212ENST00000498463 RNFT1Q5M7Z0 435 aa10.62□□□□□ -0.71
SNX13-212ENST00000498463 ZC3H7AQ8IWR0 971 aaKnown RBP10.62□□□□□ -0.71
SNX13-212ENST00000498463 ACDQ96AP0 544 aa10.62□□□□□ -0.71
SNX13-212ENST00000498463 ZFYVE21Q9BQ24 234 aa10.62□□□□□ -0.71
SNX13-212ENST00000498463 UBA5Q9GZZ9 404 aa10.62□□□□□ -0.71
SNX13-212ENST00000498463 VTA1Q9NP79 307 aa10.62□□□□□ -0.71
SNX13-212ENST00000498463 PRDM11Q9NQV5 511 aa10.62□□□□□ -0.71
SNX13-212ENST00000498463 THG1LQ9NWX6 298 aaKnown RBP10.62□□□□□ -0.71
SNX13-212ENST00000498463 PCOLCE2Q9UKZ9 415 aa10.62□□□□□ -0.71
SNX13-212ENST00000498463 ZKSCAN5Q9Y2L8 839 aa10.62□□□□□ -0.71
SNX13-212ENST00000498463 FZD9O00144 591 aa10.61□□□□□ -0.71
SNX13-212ENST00000498463 TRAF5O00463 557 aa10.61□□□□□ -0.71
SNX13-212ENST00000498463 SLITRK5O94991 958 aa10.61□□□□□ -0.71
SNX13-212ENST00000498463 TRIM27P14373 513 aa10.61□□□□□ -0.71
SNX13-212ENST00000498463 PDE6BP35913 854 aa10.61□□□□□ -0.71
SNX13-212ENST00000498463 GPR85P60893 370 aa10.61□□□□□ -0.71
SNX13-212ENST00000498463 HDGFL2Q7Z4V5 671 aaPredicted RBP10.61□□□□□ -0.71
SNX13-212ENST00000498463 C2CD4AQ8NCU7 369 aaPredicted RBP10.61□□□□□ -0.71
SNX13-212ENST00000498463 USP33Q8TEY7 942 aa10.61□□□□□ -0.71
SNX13-212ENST00000498463 EDARADDQ8WWZ3 215 aa10.61□□□□□ -0.71
SNX13-212ENST00000498463 TIFAQ96CG3 184 aa10.61□□□□□ -0.71
SNX13-212ENST00000498463 CABP5Q9NP86 173 aa10.61□□□□□ -0.71
SNX13-212ENST00000498463 SPTLC3Q9NUV7 552 aa10.61□□□□□ -0.71
SNX13-212ENST00000498463 COQ6Q9Y2Z9 468 aa10.61□□□□□ -0.71
SNX13-212ENST00000498463 H0Y8X5 98 aa10.6□□□□□ -0.71
SNX13-212ENST00000498463 ULK1O75385 1050 aa10.6□□□□□ -0.71
SNX13-212ENST00000498463 THBDP07204 575 aa10.6□□□□□ -0.71
SNX13-212ENST00000498463 PF4V1P10720 104 aa10.6□□□□□ -0.71
SNX13-212ENST00000498463 CCND1P24385 295 aa10.6□□□□□ -0.71
SNX13-212ENST00000498463 KLF1Q13351 362 aaPredicted RBP10.6□□□□□ -0.71
SNX13-212ENST00000498463 LAPTM4AQ15012 233 aa10.6□□□□□ -0.71
SNX13-212ENST00000498463 RALBP1Q15311 655 aa10.6□□□□□ -0.71
SNX13-212ENST00000498463 ACBD5Q5T8D3 534 aaPredicted RBP10.6□□□□□ -0.71
SNX13-212ENST00000498463 GPAT2Q6NUI2 795 aa10.6□□□□□ -0.71
SNX13-212ENST00000498463 RSPO2Q6UXX9 243 aaPredicted RBP10.6□□□□□ -0.71
SNX13-212ENST00000498463 IFNL3Q8IZI9 196 aa10.6□□□□□ -0.71
SNX13-212ENST00000498463 C12orf50Q8NA57 414 aaPredicted RBP10.6□□□□□ -0.71
SNX13-212ENST00000498463 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.6□□□□□ -0.71
SNX13-212ENST00000498463 AHCYL2Q96HN2 611 aaKnown RBP10.6□□□□□ -0.71
SNX13-212ENST00000498463 BTBD6Q96KE9 485 aa10.6□□□□□ -0.71
SNX13-212ENST00000498463 PNMA8BQ9ULN7 279 aaPredicted RBP10.6□□□□□ -0.71
SNX13-212ENST00000498463 C11orf95C9JLR9 678 aaPredicted RBP10.59□□□□□ -0.71
SNX13-212ENST00000498463 STXBP3O00186 592 aa10.59□□□□□ -0.71
SNX13-212ENST00000498463 OCRLQ01968 901 aa10.59□□□□□ -0.71
SNX13-212ENST00000498463 FAPQ12884 760 aa10.59□□□□□ -0.71
SNX13-212ENST00000498463 MINDY4Q4G0A6 757 aa10.59□□□□□ -0.71
SNX13-212ENST00000498463 TMEM177Q53S58 311 aa10.59□□□□□ -0.71
SNX13-212ENST00000498463 C10orf62Q5T681 223 aaPredicted RBP10.59□□□□□ -0.71
SNX13-212ENST00000498463 TMC3Q7Z5M5 1100 aa10.59□□□□□ -0.71
SNX13-212ENST00000498463 C11orf96Q7Z7L8 435 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms