RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 CYP27B1O15528 508 aa6.62□□□□□ -1.35
HMGXB4-208ENST00000498325 AOC2O75106 756 aa6.62□□□□□ -1.35
HMGXB4-208ENST00000498325 DDNO94850 711 aaPredicted RBP6.62□□□□□ -1.35
HMGXB4-208ENST00000498325 PDGFAP04085 211 aa6.62□□□□□ -1.35
HMGXB4-208ENST00000498325 ZNF865P0CJ78 1059 aaPredicted RBP6.62□□□□□ -1.35
HMGXB4-208ENST00000498325 CD8BP10966 210 aa6.62□□□□□ -1.35
HMGXB4-208ENST00000498325 ASPAP45381 313 aa6.62□□□□□ -1.35
HMGXB4-208ENST00000498325 GRM1Q13255 1194 aa6.62□□□□□ -1.35
HMGXB4-208ENST00000498325 ITPK1Q13572 414 aa6.62□□□□□ -1.35
HMGXB4-208ENST00000498325 CYP4F22Q6NT55 531 aa6.62□□□□□ -1.35
HMGXB4-208ENST00000498325 TTC5Q8N0Z6 440 aa6.62□□□□□ -1.35
HMGXB4-208ENST00000498325 NLGN1Q8N2Q7 840 aa6.62□□□□□ -1.35
HMGXB4-208ENST00000498325 CAPNS2Q96L46 248 aa6.62□□□□□ -1.35
HMGXB4-208ENST00000498325 GPR101Q96P66 508 aaPredicted RBP6.62□□□□□ -1.35
HMGXB4-208ENST00000498325 TNNQ9UQP3 1299 aa6.62□□□□□ -1.35
HMGXB4-208ENST00000498325 DAGLAQ9Y4D2 1042 aa6.62□□□□□ -1.35
HMGXB4-208ENST00000498325 KAT6BQ8WYB5 2073 aa6.62□□□□□ -1.35
HMGXB4-208ENST00000498325 SCN11AQ9UI33 1791 aa6.62□□□□□ -1.35
HMGXB4-208ENST00000498325 C4AP0C0L4 1744 aa6.62□□□□□ -1.35
HMGXB4-208ENST00000498325 ADAMTS7Q9UKP4 1686 aa6.61□□□□□ -1.35
HMGXB4-208ENST00000498325 ABCC4O15439 1325 aa6.61□□□□□ -1.35
HMGXB4-208ENST00000498325 CACNA1FO60840 1977 aa6.61□□□□□ -1.35
HMGXB4-208ENST00000498325 DYNC1LI2O43237 492 aaPredicted RBP6.61□□□□□ -1.35
HMGXB4-208ENST00000498325 PHACTR2O75167 634 aa6.61□□□□□ -1.35
HMGXB4-208ENST00000498325 CYP11A1P05108 521 aa6.61□□□□□ -1.35
HMGXB4-208ENST00000498325 GYS1P13807 737 aa6.61□□□□□ -1.35
HMGXB4-208ENST00000498325 EIF2S2P20042 333 aaKnown RBP6.61□□□□□ -1.35
HMGXB4-208ENST00000498325 CCT4P50991 539 aaKnown RBP6.61□□□□□ -1.35
HMGXB4-208ENST00000498325 FMR1Q06787 632 aaKnown RBP eCLIP6.61□□□□□ -1.35
HMGXB4-208ENST00000498325 INTS3Q68E01 1043 aaKnown RBP6.61□□□□□ -1.35
HMGXB4-208ENST00000498325 ZNF790Q6PG37 636 aa6.61□□□□□ -1.35
HMGXB4-208ENST00000498325 LDHDQ86WU2 507 aa6.61□□□□□ -1.35
HMGXB4-208ENST00000498325 PLD6Q8N2A8 252 aaKnown RBP6.61□□□□□ -1.35
HMGXB4-208ENST00000498325 LRRN4CLQ8ND94 238 aa6.61□□□□□ -1.35
HMGXB4-208ENST00000498325 SLC17A8Q8NDX2 589 aa6.61□□□□□ -1.35
HMGXB4-208ENST00000498325 PI4K2BQ8TCG2 481 aa6.61□□□□□ -1.35
HMGXB4-208ENST00000498325 NETO1Q8TDF5 533 aa6.61□□□□□ -1.35
HMGXB4-208ENST00000498325 ZFYVE1Q9HBF4 777 aa6.61□□□□□ -1.35
HMGXB4-208ENST00000498325 ADAMTS6Q9UKP5 1117 aa6.61□□□□□ -1.35
HMGXB4-208ENST00000498325 ABT1Q9ULW3 272 aaKnown RBP6.61□□□□□ -1.35
HMGXB4-208ENST00000498325 TIAM2Q8IVF5 1701 aa6.61□□□□□ -1.35
HMGXB4-208ENST00000498325 SIPA1L3O60292 1781 aaPredicted RBP6.6□□□□□ -1.35
HMGXB4-208ENST00000498325 PITPNM2Q9BZ72 1349 aa6.6□□□□□ -1.35
HMGXB4-208ENST00000498325 METTL12A8MUP2 240 aa6.6□□□□□ -1.35
HMGXB4-208ENST00000498325 KCNQ3O43525 872 aa6.6□□□□□ -1.35
HMGXB4-208ENST00000498325 CTSBP07858 339 aa6.6□□□□□ -1.35
HMGXB4-208ENST00000498325 SNRPA1P09661 255 aaKnown RBP6.6□□□□□ -1.35
HMGXB4-208ENST00000498325 MZF1P28698 734 aaPredicted RBP6.6□□□□□ -1.35
HMGXB4-208ENST00000498325 MESP2Q0VG99 397 aa6.6□□□□□ -1.35
HMGXB4-208ENST00000498325 POU4F3Q15319 338 aa6.6□□□□□ -1.35
HMGXB4-208ENST00000498325 BHLHE22Q8NFJ8 381 aaPredicted RBP6.6□□□□□ -1.35
HMGXB4-208ENST00000498325 TAF1DQ9H5J8 278 aaPredicted RBP6.6□□□□□ -1.35
HMGXB4-208ENST00000498325 ZBTB40Q9NUA8 1239 aa6.6□□□□□ -1.35
HMGXB4-208ENST00000498325 DBF4Q9UBU7 674 aaPredicted RBP6.6□□□□□ -1.35
HMGXB4-208ENST00000498325 SEPT3Q9UH03 358 aa6.6□□□□□ -1.35
HMGXB4-208ENST00000498325 HEG1Q9ULI3 1381 aa6.59□□□□□ -1.35
HMGXB4-208ENST00000498325 LRRC10BA6NIK2 292 aa6.59□□□□□ -1.35
HMGXB4-208ENST00000498325 PCDH1Q08174 1060 aa6.59□□□□□ -1.35
HMGXB4-208ENST00000498325 DDR1Q08345 913 aa6.59□□□□□ -1.35
HMGXB4-208ENST00000498325 HDAC1Q13547 482 aaPredicted RBP6.59□□□□□ -1.35
HMGXB4-208ENST00000498325 NOM1Q5C9Z4 860 aaKnown RBP6.59□□□□□ -1.35
HMGXB4-208ENST00000498325 MAP1SQ66K74 1059 aaPredicted RBP6.59□□□□□ -1.35
HMGXB4-208ENST00000498325 SLC4A10Q6U841 1118 aa6.59□□□□□ -1.35
HMGXB4-208ENST00000498325 FAM181AQ8N9Y4 354 aa6.59□□□□□ -1.35
HMGXB4-208ENST00000498325 CLP1Q92989 425 aaKnown RBP6.59□□□□□ -1.35
HMGXB4-208ENST00000498325 TOX2Q96NM4 488 aa6.59□□□□□ -1.35
HMGXB4-208ENST00000498325 GSX1Q9H4S2 264 aaPredicted RBP6.59□□□□□ -1.35
HMGXB4-208ENST00000498325 LATS2Q9NRM7 1088 aa6.59□□□□□ -1.35
HMGXB4-208ENST00000498325 HYPKQ9NX55 129 aa6.59□□□□□ -1.35
HMGXB4-208ENST00000498325 VAV3Q9UKW4 847 aa6.59□□□□□ -1.35
HMGXB4-208ENST00000498325 TNFRSF21O75509 655 aa6.58□□□□□ -1.36
HMGXB4-208ENST00000498325 DDX58O95786 925 aaKnown RBP6.58□□□□□ -1.36
HMGXB4-208ENST00000498325 IGHDP01880 384 aa6.58□□□□□ -1.36
HMGXB4-208ENST00000498325 GNAI3P08754 354 aa6.58□□□□□ -1.36
HMGXB4-208ENST00000498325 HMGB2P26583 209 aaKnown RBP6.58□□□□□ -1.36
HMGXB4-208ENST00000498325 SLC39A6Q13433 755 aa6.58□□□□□ -1.36
HMGXB4-208ENST00000498325 EAPPQ56P03 285 aaPredicted RBP6.58□□□□□ -1.36
HMGXB4-208ENST00000498325 LCE5AQ5TCM9 118 aa6.58□□□□□ -1.36
HMGXB4-208ENST00000498325 TMEM164Q5U3C3 297 aa6.58□□□□□ -1.36
HMGXB4-208ENST00000498325 PEAR1Q5VY43 1037 aaPredicted RBP6.58□□□□□ -1.36
HMGXB4-208ENST00000498325 G2E3Q7L622 706 aa6.58□□□□□ -1.36
HMGXB4-208ENST00000498325 RPAP2Q8IXW5 612 aaPredicted RBP6.58□□□□□ -1.36
HMGXB4-208ENST00000498325 CNTROBQ8N137 903 aa6.58□□□□□ -1.36
HMGXB4-208ENST00000498325 SNX29Q8TEQ0 813 aa6.58□□□□□ -1.36
HMGXB4-208ENST00000498325 PIGBQ92521 554 aa6.58□□□□□ -1.36
HMGXB4-208ENST00000498325 TEX13AQ9BXU3 409 aaPredicted RBP6.58□□□□□ -1.36
HMGXB4-208ENST00000498325 DDX21Q9NR30 783 aaKnown RBP eCLIP6.58□□□□□ -1.36
HMGXB4-208ENST00000498325 TMOD3Q9NYL9 352 aa6.58□□□□□ -1.36
HMGXB4-208ENST00000498325 HDAC5Q9UQL6 1122 aa6.58□□□□□ -1.36
HMGXB4-208ENST00000498325 MRC1P22897 1456 aa6.58□□□□□ -1.36
HMGXB4-208ENST00000498325 SZT2Q5T011 3432 aa6.57□□□□□ -1.36
HMGXB4-208ENST00000498325 CD96P40200 585 aa6.57□□□□□ -1.36
HMGXB4-208ENST00000498325 ECE1P42892 770 aa6.57□□□□□ -1.36
HMGXB4-208ENST00000498325 RAP1GAPP47736 663 aa6.57□□□□□ -1.36
HMGXB4-208ENST00000498325 PRKCQQ04759 706 aa6.57□□□□□ -1.36
HMGXB4-208ENST00000498325 ZNF423Q2M1K9 1284 aa6.57□□□□□ -1.36
HMGXB4-208ENST00000498325 LILRA6Q6PI73 481 aa6.57□□□□□ -1.36
HMGXB4-208ENST00000498325 SMARCC1Q92922 1105 aaPredicted RBP6.57□□□□□ -1.36
HMGXB4-208ENST00000498325 ZNF496Q96IT1 587 aaPredicted RBP6.57□□□□□ -1.36
HMGXB4-208ENST00000498325 CORO1BQ9BR76 489 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms