RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.22□□□□□ -0.29
CTTN-208ENST00000498223 ABCB11O95342 1321 aa13.21□□□□□ -0.29
CTTN-208ENST00000498223 SLC25A27O95847 323 aa13.21□□□□□ -0.29
CTTN-208ENST00000498223 BCRP11274 1271 aa13.21□□□□□ -0.29
CTTN-208ENST00000498223 SCG2P13521 617 aa13.21□□□□□ -0.29
CTTN-208ENST00000498223 TAL1P17542 331 aaPredicted RBP13.21□□□□□ -0.29
CTTN-208ENST00000498223 COPB2P35606 906 aa13.21□□□□□ -0.29
CTTN-208ENST00000498223 FOSBP53539 338 aa13.21□□□□□ -0.29
CTTN-208ENST00000498223 SP3Q02447 781 aa13.21□□□□□ -0.29
CTTN-208ENST00000498223 FUT2Q10981 343 aa13.21□□□□□ -0.29
CTTN-208ENST00000498223 TKFCQ3LXA3 575 aa13.21□□□□□ -0.29
CTTN-208ENST00000498223 RIOX2Q8IUF8 465 aa13.21□□□□□ -0.29
CTTN-208ENST00000498223 FAM184AQ8NB25 1140 aa13.21□□□□□ -0.29
CTTN-208ENST00000498223 WASF1Q92558 559 aa13.21□□□□□ -0.29
CTTN-208ENST00000498223 GPKOWQ92917 476 aaPredicted RBP eCLIP13.21□□□□□ -0.29
CTTN-208ENST00000498223 COA7Q96BR5 231 aa13.21□□□□□ -0.29
CTTN-208ENST00000498223 MTMR8Q96EF0 704 aa13.21□□□□□ -0.29
CTTN-208ENST00000498223 TRERF1Q96PN7 1200 aa13.21□□□□□ -0.29
CTTN-208ENST00000498223 LLPHQ9BRT6 129 aaKnown RBP13.21□□□□□ -0.29
CTTN-208ENST00000498223 RNF146Q9NTX7 359 aa13.21□□□□□ -0.29
CTTN-208ENST00000498223 DAXXQ9UER7 740 aaPredicted RBP13.21□□□□□ -0.29
CTTN-208ENST00000498223 ZNF214Q9UL59 606 aaPredicted RBP13.21□□□□□ -0.29
CTTN-208ENST00000498223 SMC3Q9UQE7 1217 aa13.21□□□□□ -0.29
CTTN-208ENST00000498223 MRPL11Q9Y3B7 192 aaKnown RBP13.21□□□□□ -0.29
CTTN-208ENST00000498223 PCDHA1Q9Y5I3 950 aa13.21□□□□□ -0.29
CTTN-208ENST00000498223 IVNS1ABPQ9Y6Y0 642 aa13.21□□□□□ -0.29
CTTN-208ENST00000498223 ZNF536O15090 1300 aa13.2□□□□□ -0.3
CTTN-208ENST00000498223 ATP2A1O14983 1001 aa13.2□□□□□ -0.3
CTTN-208ENST00000498223 JAK2O60674 1132 aa13.2□□□□□ -0.3
CTTN-208ENST00000498223 DEXIO95424 95 aa13.2□□□□□ -0.3
CTTN-208ENST00000498223 CTDNEP1O95476 244 aa13.2□□□□□ -0.3
CTTN-208ENST00000498223 ERCC3P19447 782 aa13.2□□□□□ -0.3
CTTN-208ENST00000498223 NAPAP54920 295 aa13.2□□□□□ -0.3
CTTN-208ENST00000498223 HMGN5P82970 282 aaKnown RBP13.2□□□□□ -0.3
CTTN-208ENST00000498223 ST3GAL1Q11201 340 aa13.2□□□□□ -0.3
CTTN-208ENST00000498223 POTEEQ6S8J3 1075 aa13.2□□□□□ -0.3
CTTN-208ENST00000498223 SPRYD3Q8NCJ5 442 aa13.2□□□□□ -0.3
CTTN-208ENST00000498223 NSUN7Q8NE18 718 aaKnown RBP13.2□□□□□ -0.3
CTTN-208ENST00000498223 ERO1AQ96HE7 468 aa13.2□□□□□ -0.3
CTTN-208ENST00000498223 EFCC1Q9HA90 598 aa13.2□□□□□ -0.3
CTTN-208ENST00000498223 FBXO40Q9UH90 709 aa13.2□□□□□ -0.3
CTTN-208ENST00000498223 KIF3AQ9Y496 699 aa13.2□□□□□ -0.3
CTTN-208ENST00000498223 STK36Q9NRP7 1315 aa13.19□□□□□ -0.3
CTTN-208ENST00000498223 TNPO2O14787 897 aaKnown RBP13.19□□□□□ -0.3
CTTN-208ENST00000498223 XBP1P17861 261 aa13.19□□□□□ -0.3
CTTN-208ENST00000498223 MAPK4P31152 587 aa13.19□□□□□ -0.3
CTTN-208ENST00000498223 FCGRTP55899 365 aa13.19□□□□□ -0.3
CTTN-208ENST00000498223 TRIM29Q14134 588 aa13.19□□□□□ -0.3
CTTN-208ENST00000498223 PFKFB3Q16875 520 aaPredicted RBP13.19□□□□□ -0.3
CTTN-208ENST00000498223 NSMFQ6X4W1 530 aa13.19□□□□□ -0.3
CTTN-208ENST00000498223 OTOP1Q7RTM1 612 aa13.19□□□□□ -0.3
CTTN-208ENST00000498223 CHST13Q8NET6 341 aa13.19□□□□□ -0.3
CTTN-208ENST00000498223 CCDC12Q8WUD4 166 aaPredicted RBP13.19□□□□□ -0.3
CTTN-208ENST00000498223 ALG1Q9BT22 464 aa13.19□□□□□ -0.3
CTTN-208ENST00000498223 PORCNQ9H237 461 aa13.19□□□□□ -0.3
CTTN-208ENST00000498223 MROH8Q9H579 483 aa13.19□□□□□ -0.3
CTTN-208ENST00000498223 ACAD9Q9H845 621 aa13.19□□□□□ -0.3
CTTN-208ENST00000498223 TSHZ2Q9NRE2 1034 aa13.19□□□□□ -0.3
CTTN-208ENST00000498223 RIPK3Q9Y572 518 aa13.19□□□□□ -0.3
CTTN-208ENST00000498223 TRIM17Q9Y577 477 aa13.19□□□□□ -0.3
CTTN-208ENST00000498223 MCM3APO60318 1980 aa13.19□□□□□ -0.3
CTTN-208ENST00000498223 hCG_1984214I3L0E3 225 aa13.18□□□□□ -0.3
CTTN-208ENST00000498223 PPP1R11O60927 126 aaPredicted RBP13.18□□□□□ -0.3
CTTN-208ENST00000498223 FCER1AP12319 257 aa13.18□□□□□ -0.3
CTTN-208ENST00000498223 PSMC4P43686 418 aa13.18□□□□□ -0.3
CTTN-208ENST00000498223 LACTBP83111 547 aaPredicted RBP13.18□□□□□ -0.3
CTTN-208ENST00000498223 KCTD2Q14681 263 aa13.18□□□□□ -0.3
CTTN-208ENST00000498223 ARHGEF6Q15052 776 aa13.18□□□□□ -0.3
CTTN-208ENST00000498223 MUM1L1Q5H9M0 696 aa13.18□□□□□ -0.3
CTTN-208ENST00000498223 WWC2Q6AWC2 1192 aa13.18□□□□□ -0.3
CTTN-208ENST00000498223 PLEKHH3Q7Z736 793 aa13.18□□□□□ -0.3
CTTN-208ENST00000498223 MCF2L2Q86YR7 1114 aa13.18□□□□□ -0.3
CTTN-208ENST00000498223 ANKRD35Q8N283 1001 aa13.18□□□□□ -0.3
CTTN-208ENST00000498223 ZNF713Q8N859 430 aaPredicted RBP13.18□□□□□ -0.3
CTTN-208ENST00000498223 SHCBP1Q8NEM2 672 aa13.18□□□□□ -0.3
CTTN-208ENST00000498223 CD99L2Q8TCZ2 262 aa13.18□□□□□ -0.3
CTTN-208ENST00000498223 CUL5Q93034 780 aa13.18□□□□□ -0.3
CTTN-208ENST00000498223 MMP19Q99542 508 aa13.18□□□□□ -0.3
CTTN-208ENST00000498223 STXBP3O00186 592 aa13.17□□□□□ -0.3
CTTN-208ENST00000498223 CFBP00751 764 aa13.17□□□□□ -0.3
CTTN-208ENST00000498223 GJB2P29033 226 aa13.17□□□□□ -0.3
CTTN-208ENST00000498223 NLRP5P59047 1200 aa13.17□□□□□ -0.3
CTTN-208ENST00000498223 CUL4AQ13619 759 aa13.17□□□□□ -0.3
CTTN-208ENST00000498223 PKN1Q16512 942 aa13.17□□□□□ -0.3
CTTN-208ENST00000498223 GPR142Q7Z601 462 aa13.17□□□□□ -0.3
CTTN-208ENST00000498223 CCDC148Q8NFR7 591 aa13.17□□□□□ -0.3
CTTN-208ENST00000498223 SMARCC2Q8TAQ2 1214 aa13.17□□□□□ -0.3
CTTN-208ENST00000498223 AIFM3Q96NN9 605 aa13.17□□□□□ -0.3
CTTN-208ENST00000498223 BARHL2Q9NY43 387 aa13.17□□□□□ -0.3
CTTN-208ENST00000498223 VPS54Q9P1Q0 977 aa13.17□□□□□ -0.3
CTTN-208ENST00000498223 MYH7BA7E2Y1 1941 aa13.17□□□□□ -0.3
CTTN-208ENST00000498223 LCTP09848 1927 aa13.16□□□□□ -0.3
CTTN-208ENST00000498223 SMCO2A6NFE2 343 aa13.16□□□□□ -0.3
CTTN-208ENST00000498223 NFIBO00712 420 aa13.16□□□□□ -0.3
CTTN-208ENST00000498223 FDPSP14324 419 aaKnown RBP13.16□□□□□ -0.3
CTTN-208ENST00000498223 CALML3P27482 149 aa13.16□□□□□ -0.3
CTTN-208ENST00000498223 ADCY7P51828 1080 aa13.16□□□□□ -0.3
CTTN-208ENST00000498223 RNF207Q6ZRF8 634 aa13.16□□□□□ -0.3
CTTN-208ENST00000498223 INTS4Q96HW7 963 aaKnown RBP13.16□□□□□ -0.3
CTTN-208ENST00000498223 C8orf76Q96K31 380 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms