RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 PKN1Q16512 942 aa15.65■□□□□ 0.1
CPNE1-227ENST00000498056 NCAPG2Q86XI2 1143 aa15.65■□□□□ 0.1
CPNE1-227ENST00000498056 CCAR1Q8IX12 1150 aaKnown RBP15.65■□□□□ 0.1
CPNE1-227ENST00000498056 ZNF713Q8N859 430 aaPredicted RBP15.65■□□□□ 0.1
CPNE1-227ENST00000498056 GPRC5AQ8NFJ5 357 aa15.65■□□□□ 0.1
CPNE1-227ENST00000498056 MORF4L1Q9UBU8 362 aa15.65■□□□□ 0.1
CPNE1-227ENST00000498056 KIF3AQ9Y496 699 aa15.65■□□□□ 0.1
CPNE1-227ENST00000498056 PCDHA1Q9Y5I3 950 aa15.65■□□□□ 0.1
CPNE1-227ENST00000498056 KIAA1217Q5T5P2 1943 aa15.64■□□□□ 0.09
CPNE1-227ENST00000498056 CEP350Q5VT06 3117 aa15.64■□□□□ 0.09
CPNE1-227ENST00000498056 STXBP3O00186 592 aa15.64■□□□□ 0.09
CPNE1-227ENST00000498056 BCRP11274 1271 aa15.64■□□□□ 0.09
CPNE1-227ENST00000498056 FDPSP14324 419 aaKnown RBP15.64■□□□□ 0.09
CPNE1-227ENST00000498056 STAT3P40763 770 aa15.64■□□□□ 0.09
CPNE1-227ENST00000498056 CCNA1P78396 465 aa15.64■□□□□ 0.09
CPNE1-227ENST00000498056 TRAF1Q13077 416 aa15.64■□□□□ 0.09
CPNE1-227ENST00000498056 TRIM29Q14134 588 aa15.64■□□□□ 0.09
CPNE1-227ENST00000498056 CCDC148Q8NFR7 591 aa15.64■□□□□ 0.09
CPNE1-227ENST00000498056 INTS4Q96HW7 963 aaKnown RBP15.64■□□□□ 0.09
CPNE1-227ENST00000498056 MOV10L1Q9BXT6 1211 aaKnown RBP15.64■□□□□ 0.09
CPNE1-227ENST00000498056 R3HDMLQ9H3Y0 253 aa15.64■□□□□ 0.09
CPNE1-227ENST00000498056 ACAD9Q9H845 621 aa15.64■□□□□ 0.09
CPNE1-227ENST00000498056 SAGE1Q9NXZ1 904 aa15.64■□□□□ 0.09
CPNE1-227ENST00000498056 TSKSQ9UJT2 592 aa15.64■□□□□ 0.09
CPNE1-227ENST00000498056 PNMA2Q9UL42 364 aa15.64■□□□□ 0.09
CPNE1-227ENST00000498056 ATP2A1O14983 1001 aa15.63■□□□□ 0.09
CPNE1-227ENST00000498056 XBP1P17861 261 aa15.63■□□□□ 0.09
CPNE1-227ENST00000498056 ERCC3P19447 782 aa15.63■□□□□ 0.09
CPNE1-227ENST00000498056 COPB2P35606 906 aa15.63■□□□□ 0.09
CPNE1-227ENST00000498056 MUM1L1Q5H9M0 696 aa15.63■□□□□ 0.09
CPNE1-227ENST00000498056 PPP1R18Q6NYC8 613 aa15.63■□□□□ 0.09
CPNE1-227ENST00000498056 C17orf99Q6UX52 265 aa15.63■□□□□ 0.09
CPNE1-227ENST00000498056 RIOX2Q8IUF8 465 aa15.63■□□□□ 0.09
CPNE1-227ENST00000498056 CCDC12Q8WUD4 166 aaPredicted RBP15.63■□□□□ 0.09
CPNE1-227ENST00000498056 TRERF1Q96PN7 1200 aa15.63■□□□□ 0.09
CPNE1-227ENST00000498056 PORCNQ9H237 461 aa15.63■□□□□ 0.09
CPNE1-227ENST00000498056 BARHL2Q9NY43 387 aa15.63■□□□□ 0.09
CPNE1-227ENST00000498056 RIPK3Q9Y572 518 aa15.63■□□□□ 0.09
CPNE1-227ENST00000498056 PCNTO95613 3336 aa15.63■□□□□ 0.09
CPNE1-227ENST00000498056 NFIBO00712 420 aa15.62■□□□□ 0.09
CPNE1-227ENST00000498056 SLC25A27O95847 323 aa15.62■□□□□ 0.09
CPNE1-227ENST00000498056 ADCY7P51828 1080 aa15.62■□□□□ 0.09
CPNE1-227ENST00000498056 GUCY1B3Q02153 619 aa15.62■□□□□ 0.09
CPNE1-227ENST00000498056 Q3C1V9 767 aa15.62■□□□□ 0.09
CPNE1-227ENST00000498056 TKFCQ3LXA3 575 aa15.62■□□□□ 0.09
CPNE1-227ENST00000498056 TYW1BQ6NUM6 668 aa15.62■□□□□ 0.09
CPNE1-227ENST00000498056 DNAJC5GQ8N7S2 189 aa15.62■□□□□ 0.09
CPNE1-227ENST00000498056 C8orf76Q96K31 380 aa15.62■□□□□ 0.09
CPNE1-227ENST00000498056 EFCC1Q9HA90 598 aa15.62■□□□□ 0.09
CPNE1-227ENST00000498056 GJB4Q9NTQ9 266 aa15.62■□□□□ 0.09
CPNE1-227ENST00000498056 MRPL11Q9Y3B7 192 aaKnown RBP15.62■□□□□ 0.09
CPNE1-227ENST00000498056 NLRP5P59047 1200 aa15.61■□□□□ 0.09
CPNE1-227ENST00000498056 NSMFQ6X4W1 530 aa15.61■□□□□ 0.09
CPNE1-227ENST00000498056 SLC30A10Q6XR72 485 aa15.61■□□□□ 0.09
CPNE1-227ENST00000498056 SHCBP1Q8NEM2 672 aa15.61■□□□□ 0.09
CPNE1-227ENST00000498056 CFHR5Q9BXR6 569 aa15.61■□□□□ 0.09
CPNE1-227ENST00000498056 FBXO40Q9UH90 709 aa15.61■□□□□ 0.09
CPNE1-227ENST00000498056 KCNJ14Q9UNX9 436 aa15.61■□□□□ 0.09
CPNE1-227ENST00000498056 IVNS1ABPQ9Y6Y0 642 aa15.61■□□□□ 0.09
CPNE1-227ENST00000498056 CFBP00751 764 aa15.6■□□□□ 0.09
CPNE1-227ENST00000498056 MAPK4P31152 587 aa15.6■□□□□ 0.09
CPNE1-227ENST00000498056 CHST13Q8NET6 341 aa15.6■□□□□ 0.09
CPNE1-227ENST00000498056 CUL5Q93034 780 aa15.6■□□□□ 0.09
CPNE1-227ENST00000498056 SHISA4Q96DD7 197 aa15.6■□□□□ 0.09
CPNE1-227ENST00000498056 MMP19Q99542 508 aa15.6■□□□□ 0.09
CPNE1-227ENST00000498056 MROH8Q9H579 483 aa15.6■□□□□ 0.09
CPNE1-227ENST00000498056 DOCK5Q9H7D0 1870 aa15.59■□□□□ 0.09
CPNE1-227ENST00000498056 VPS37CA5D8V6 355 aaPredicted RBP15.59■□□□□ 0.09
CPNE1-227ENST00000498056 SMCO2A6NFE2 343 aa15.59■□□□□ 0.09
CPNE1-227ENST00000498056 H3BQV1 296 aa15.59■□□□□ 0.09
CPNE1-227ENST00000498056 TNPO2O14787 897 aaKnown RBP15.59■□□□□ 0.09
CPNE1-227ENST00000498056 OPLAHO14841 1288 aa15.59■□□□□ 0.09
CPNE1-227ENST00000498056 UBE2SQ16763 222 aa15.59■□□□□ 0.09
CPNE1-227ENST00000498056 IFFO2Q5TF58 517 aa15.59■□□□□ 0.09
CPNE1-227ENST00000498056 KRT40Q6A162 431 aa15.59■□□□□ 0.09
CPNE1-227ENST00000498056 GPR142Q7Z601 462 aa15.59■□□□□ 0.09
CPNE1-227ENST00000498056 CLEC4DQ8WXI8 215 aa15.59■□□□□ 0.09
CPNE1-227ENST00000498056 C6orf50Q9HD87 102 aa15.59■□□□□ 0.09
CPNE1-227ENST00000498056 A1CFQ9NQ94 594 aaKnown RBP15.59■□□□□ 0.09
CPNE1-227ENST00000498056 SH3GLB2Q9NR46 395 aa15.59■□□□□ 0.09
CPNE1-227ENST00000498056 WBP1LQ9NX94 342 aa15.59■□□□□ 0.09
CPNE1-227ENST00000498056 PFASO15067 1338 aa15.59■□□□□ 0.09
CPNE1-227ENST00000498056 ESYT2A0FGR8 921 aa15.58■□□□□ 0.08
CPNE1-227ENST00000498056 GPR25O00155 361 aa15.58■□□□□ 0.08
CPNE1-227ENST00000498056 PDCP20941 246 aa15.58■□□□□ 0.08
CPNE1-227ENST00000498056 CALML3P27482 149 aa15.58■□□□□ 0.08
CPNE1-227ENST00000498056 HOXA13P31271 388 aaPredicted RBP15.58■□□□□ 0.08
CPNE1-227ENST00000498056 FCGRTP55899 365 aa15.58■□□□□ 0.08
CPNE1-227ENST00000498056 LACTBP83111 547 aaPredicted RBP15.58■□□□□ 0.08
CPNE1-227ENST00000498056 SP3Q02447 781 aa15.58■□□□□ 0.08
CPNE1-227ENST00000498056 KCTD2Q14681 263 aa15.58■□□□□ 0.08
CPNE1-227ENST00000498056 KIF22Q14807 665 aa15.58■□□□□ 0.08
CPNE1-227ENST00000498056 RNF207Q6ZRF8 634 aa15.58■□□□□ 0.08
CPNE1-227ENST00000498056 MCF2L2Q86YR7 1114 aa15.58■□□□□ 0.08
CPNE1-227ENST00000498056 ANKRD35Q8N283 1001 aa15.58■□□□□ 0.08
CPNE1-227ENST00000498056 CD99L2Q8TCZ2 262 aa15.58■□□□□ 0.08
CPNE1-227ENST00000498056 PHF20Q9BVI0 1012 aa15.58■□□□□ 0.08
CPNE1-227ENST00000498056 ARHGAP39Q9C0H5 1083 aa15.58■□□□□ 0.08
CPNE1-227ENST00000498056 PSTPIP2Q9H939 334 aa15.58■□□□□ 0.08
CPNE1-227ENST00000498056 BRMS1Q9HCU9 246 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms