RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 QRICH1Q2TAL8 776 aa9.2□□□□□ -0.94
PDZRN3-212ENST00000498048 ANO6Q4KMQ2 910 aa9.2□□□□□ -0.94
PDZRN3-212ENST00000498048 DCAF15Q66K64 600 aa9.2□□□□□ -0.94
PDZRN3-212ENST00000498048 MIGA2Q7L4E1 593 aa9.2□□□□□ -0.94
PDZRN3-212ENST00000498048 GPC2Q8N158 579 aa9.2□□□□□ -0.94
PDZRN3-212ENST00000498048 FAM200AQ8TCP9 573 aa9.2□□□□□ -0.94
PDZRN3-212ENST00000498048 CUL5Q93034 780 aa9.2□□□□□ -0.94
PDZRN3-212ENST00000498048 COA7Q96BR5 231 aa9.2□□□□□ -0.94
PDZRN3-212ENST00000498048 MTMR8Q96EF0 704 aa9.2□□□□□ -0.94
PDZRN3-212ENST00000498048 TEPSINQ96N21 525 aa9.2□□□□□ -0.94
PDZRN3-212ENST00000498048 TMEM106CQ9BVX2 250 aa9.2□□□□□ -0.94
PDZRN3-212ENST00000498048 GPRC5DQ9NZD1 345 aa9.2□□□□□ -0.94
PDZRN3-212ENST00000498048 RNF181Q9P0P0 153 aa9.2□□□□□ -0.94
PDZRN3-212ENST00000498048 PGAP2Q9UHJ9 254 aa9.2□□□□□ -0.94
PDZRN3-212ENST00000498048 SRPRBQ9Y5M8 271 aaKnown RBP9.2□□□□□ -0.94
PDZRN3-212ENST00000498048 ZNFX1Q9P2E3 1918 aaKnown RBP9.19□□□□□ -0.94
PDZRN3-212ENST00000498048 A0A1W2PRG0 241 aa9.19□□□□□ -0.94
PDZRN3-212ENST00000498048 VWA3AA6NCI4 1184 aa9.19□□□□□ -0.94
PDZRN3-212ENST00000498048 TMEM232C9JQI7 657 aa9.19□□□□□ -0.94
PDZRN3-212ENST00000498048 SOCS7O14512 581 aa9.19□□□□□ -0.94
PDZRN3-212ENST00000498048 LMOD1P29536 600 aaPredicted RBP9.19□□□□□ -0.94
PDZRN3-212ENST00000498048 TXLNAP40222 546 aa9.19□□□□□ -0.94
PDZRN3-212ENST00000498048 STAT2P52630 851 aa9.19□□□□□ -0.94
PDZRN3-212ENST00000498048 PTGDRQ13258 359 aa9.19□□□□□ -0.94
PDZRN3-212ENST00000498048 ORC2Q13416 577 aaPredicted RBP9.19□□□□□ -0.94
PDZRN3-212ENST00000498048 ZYXQ15942 572 aaKnown RBP9.19□□□□□ -0.94
PDZRN3-212ENST00000498048 FAM83BQ5T0W9 1011 aa9.19□□□□□ -0.94
PDZRN3-212ENST00000498048 ANGEL2Q5VTE6 544 aaKnown RBP9.19□□□□□ -0.94
PDZRN3-212ENST00000498048 JAKMIP3Q5VZ66 844 aa9.19□□□□□ -0.94
PDZRN3-212ENST00000498048 NEK8Q86SG6 692 aa9.19□□□□□ -0.94
PDZRN3-212ENST00000498048 SIAH1Q8IUQ4 282 aa9.19□□□□□ -0.94
PDZRN3-212ENST00000498048 SPICE1Q8N0Z3 855 aa9.19□□□□□ -0.94
PDZRN3-212ENST00000498048 ACER1Q8TDN7 264 aa9.19□□□□□ -0.94
PDZRN3-212ENST00000498048 HOOK2Q96ED9 719 aa9.19□□□□□ -0.94
PDZRN3-212ENST00000498048 TIGD1Q96MW7 591 aa9.19□□□□□ -0.94
PDZRN3-212ENST00000498048 SDF4Q9BRK5 362 aa9.19□□□□□ -0.94
PDZRN3-212ENST00000498048 CSRNP2Q9H175 543 aa9.19□□□□□ -0.94
PDZRN3-212ENST00000498048 VCPKMTQ9H867 229 aa9.19□□□□□ -0.94
PDZRN3-212ENST00000498048 RIC8AQ9NPQ8 531 aa9.19□□□□□ -0.94
PDZRN3-212ENST00000498048 KCNH3Q9ULD8 1083 aa9.19□□□□□ -0.94
PDZRN3-212ENST00000498048 TMX2Q9Y320 296 aa9.19□□□□□ -0.94
PDZRN3-212ENST00000498048 MCM3APO60318 1980 aa9.18□□□□□ -0.94
PDZRN3-212ENST00000498048 NEMFO60524 1076 aa9.18□□□□□ -0.94
PDZRN3-212ENST00000498048 OR52Z1P0C646 297 aa9.18□□□□□ -0.94
PDZRN3-212ENST00000498048 UBE2SQ16763 222 aa9.18□□□□□ -0.94
PDZRN3-212ENST00000498048 LETM2Q2VYF4 491 aa9.18□□□□□ -0.94
PDZRN3-212ENST00000498048 USH1GQ495M9 461 aa9.18□□□□□ -0.94
PDZRN3-212ENST00000498048 SPECC1Q5M775 1068 aa9.18□□□□□ -0.94
PDZRN3-212ENST00000498048 ARL6IP4Q66PJ3 421 aaKnown RBP9.18□□□□□ -0.94
PDZRN3-212ENST00000498048 KRBA2Q6ZNG9 492 aa9.18□□□□□ -0.94
PDZRN3-212ENST00000498048 CCDC84Q86UT8 332 aaPredicted RBP9.18□□□□□ -0.94
PDZRN3-212ENST00000498048 CEP57L1Q8IYX8 460 aa9.18□□□□□ -0.94
PDZRN3-212ENST00000498048 CNNM3Q8NE01 707 aa9.18□□□□□ -0.94
PDZRN3-212ENST00000498048 SYMPKQ92797 1274 aaKnown RBP9.18□□□□□ -0.94
PDZRN3-212ENST00000498048 CCDC34Q96HJ3 373 aa9.18□□□□□ -0.94
PDZRN3-212ENST00000498048 ZNF341Q9BYN7 854 aa9.18□□□□□ -0.94
PDZRN3-212ENST00000498048 PITPNM2Q9BZ72 1349 aa9.18□□□□□ -0.94
PDZRN3-212ENST00000498048 GLT8D2Q9H1C3 349 aa9.18□□□□□ -0.94
PDZRN3-212ENST00000498048 DNAJC25Q9H1X3 360 aa9.18□□□□□ -0.94
PDZRN3-212ENST00000498048 GINM1Q9NU53 330 aa9.18□□□□□ -0.94
PDZRN3-212ENST00000498048 ANO10Q9NW15 660 aa9.18□□□□□ -0.94
PDZRN3-212ENST00000498048 TMEM260Q9NX78 707 aa9.18□□□□□ -0.94
PDZRN3-212ENST00000498048 BIN2Q9UBW5 565 aaPredicted RBP9.18□□□□□ -0.94
PDZRN3-212ENST00000498048 HOOK1Q9UJC3 728 aaKnown RBP9.18□□□□□ -0.94
PDZRN3-212ENST00000498048 PPP2R3BQ9Y5P8 575 aa9.18□□□□□ -0.94
PDZRN3-212ENST00000498048 LAD1O00515 517 aa9.17□□□□□ -0.94
PDZRN3-212ENST00000498048 CCNT1O60563 726 aaKnown RBP9.17□□□□□ -0.94
PDZRN3-212ENST00000498048 YBX3P16989 372 aaKnown RBP eCLIP9.17□□□□□ -0.94
PDZRN3-212ENST00000498048 CLCN6P51797 869 aa9.17□□□□□ -0.94
PDZRN3-212ENST00000498048 MAP3K10Q02779 954 aa9.17□□□□□ -0.94
PDZRN3-212ENST00000498048 UVSSAQ2YD98 709 aa9.17□□□□□ -0.94
PDZRN3-212ENST00000498048 BTNL9Q6UXG8 535 aa9.17□□□□□ -0.94
PDZRN3-212ENST00000498048 C11orf57Q6ZUT1 292 aaPredicted RBP9.17□□□□□ -0.94
PDZRN3-212ENST00000498048 FAM160B2Q86V87 743 aa9.17□□□□□ -0.94
PDZRN3-212ENST00000498048 FBXO11Q86XK2 927 aa9.17□□□□□ -0.94
PDZRN3-212ENST00000498048 PDILTQ8N807 584 aa9.17□□□□□ -0.94
PDZRN3-212ENST00000498048 TBCKQ8TEA7 893 aa9.17□□□□□ -0.94
PDZRN3-212ENST00000498048 ERCC4Q92889 916 aaPredicted RBP9.17□□□□□ -0.94
PDZRN3-212ENST00000498048 SYT17Q9BSW7 474 aa9.17□□□□□ -0.94
PDZRN3-212ENST00000498048 AMNQ9BXJ7 453 aa9.17□□□□□ -0.94
PDZRN3-212ENST00000498048 ANO3Q9BYT9 981 aa9.17□□□□□ -0.94
PDZRN3-212ENST00000498048 GLIS2Q9BZE0 524 aaPredicted RBP9.17□□□□□ -0.94
PDZRN3-212ENST00000498048 DEFB129Q9H1M3 183 aa9.17□□□□□ -0.94
PDZRN3-212ENST00000498048 PRR12Q9ULL5 1215 aa9.17□□□□□ -0.94
PDZRN3-212ENST00000498048 PCDHA1Q9Y5I3 950 aa9.17□□□□□ -0.94
PDZRN3-212ENST00000498048 PHF20L1A8MW92 1017 aa9.16□□□□□ -0.94
PDZRN3-212ENST00000498048 WDR46O15213 610 aaKnown RBP9.16□□□□□ -0.94
PDZRN3-212ENST00000498048 POLR2DO15514 142 aaKnown RBP9.16□□□□□ -0.94
PDZRN3-212ENST00000498048 ACTN4O43707 911 aaKnown RBP9.16□□□□□ -0.94
PDZRN3-212ENST00000498048 CAVIN2O95810 425 aa9.16□□□□□ -0.94
PDZRN3-212ENST00000498048 TAL1P17542 331 aaPredicted RBP9.16□□□□□ -0.94
PDZRN3-212ENST00000498048 LONP1P36776 959 aaKnown RBP9.16□□□□□ -0.94
PDZRN3-212ENST00000498048 PRPHP41219 470 aa9.16□□□□□ -0.94
PDZRN3-212ENST00000498048 CLK2P49760 499 aaKnown RBP9.16□□□□□ -0.94
PDZRN3-212ENST00000498048 MRPL12P52815 198 aaKnown RBP9.16□□□□□ -0.94
PDZRN3-212ENST00000498048 SNAP25P60880 206 aa9.16□□□□□ -0.94
PDZRN3-212ENST00000498048 AP3B2Q13367 1082 aa9.16□□□□□ -0.94
PDZRN3-212ENST00000498048 PNOCQ13519 176 aa9.16□□□□□ -0.94
PDZRN3-212ENST00000498048 POSTNQ15063 836 aa9.16□□□□□ -0.94
PDZRN3-212ENST00000498048 KIAA1755Q5JYT7 1200 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms