RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 DNAJC7Q99615 494 aa7.31□□□□□ -1.24
TMEM39A-212ENST00000497993 NYXQ9GZU5 481 aa7.31□□□□□ -1.24
TMEM39A-212ENST00000497993 DUOX1Q9NRD9 1551 aa7.31□□□□□ -1.24
TMEM39A-212ENST00000497993 GINM1Q9NU53 330 aa7.31□□□□□ -1.24
TMEM39A-212ENST00000497993 TMEM260Q9NX78 707 aa7.31□□□□□ -1.24
TMEM39A-212ENST00000497993 DBF4Q9UBU7 674 aaPredicted RBP7.31□□□□□ -1.24
TMEM39A-212ENST00000497993 MKL2Q9ULH7 1088 aa7.31□□□□□ -1.24
TMEM39A-212ENST00000497993 COMMD10Q9Y6G5 202 aa7.31□□□□□ -1.24
TMEM39A-212ENST00000497993 M0R082 166 aa7.3□□□□□ -1.24
TMEM39A-212ENST00000497993 GHRHP01286 108 aa7.3□□□□□ -1.24
TMEM39A-212ENST00000497993 HCLS1P14317 486 aaPredicted RBP7.3□□□□□ -1.24
TMEM39A-212ENST00000497993 CPB1P15086 417 aa7.3□□□□□ -1.24
TMEM39A-212ENST00000497993 HOXA10P31260 410 aaPredicted RBP7.3□□□□□ -1.24
TMEM39A-212ENST00000497993 PIP4K2AP48426 406 aaPredicted RBP7.3□□□□□ -1.24
TMEM39A-212ENST00000497993 ST5P78524 1137 aa7.3□□□□□ -1.24
TMEM39A-212ENST00000497993 MLLT1Q03111 559 aaPredicted RBP7.3□□□□□ -1.24
TMEM39A-212ENST00000497993 KRT24Q2M2I5 525 aa7.3□□□□□ -1.24
TMEM39A-212ENST00000497993 DALRD3Q5D0E6 543 aaKnown RBP7.3□□□□□ -1.24
TMEM39A-212ENST00000497993 SLC10A5Q5PT55 438 aa7.3□□□□□ -1.24
TMEM39A-212ENST00000497993 DUSP27Q5VZP5 1158 aa7.3□□□□□ -1.24
TMEM39A-212ENST00000497993 PSAPL1Q6NUJ1 521 aa7.3□□□□□ -1.24
TMEM39A-212ENST00000497993 ELMSAN1Q6PJG2 1045 aa7.3□□□□□ -1.24
TMEM39A-212ENST00000497993 TPTE2Q6XPS3 522 aa7.3□□□□□ -1.24
TMEM39A-212ENST00000497993 KIF6Q6ZMV9 814 aa7.3□□□□□ -1.24
TMEM39A-212ENST00000497993 LILRB2Q8N423 598 aa7.3□□□□□ -1.24
TMEM39A-212ENST00000497993 TTLL6Q8N841 843 aa7.3□□□□□ -1.24
TMEM39A-212ENST00000497993 PLBD2Q8NHP8 589 aa7.3□□□□□ -1.24
TMEM39A-212ENST00000497993 ZNF417Q8TAU3 575 aa7.3□□□□□ -1.24
TMEM39A-212ENST00000497993 ANAPC16Q96DE5 110 aa7.3□□□□□ -1.24
TMEM39A-212ENST00000497993 ZNF587Q96SQ5 575 aaPredicted RBP7.3□□□□□ -1.24
TMEM39A-212ENST00000497993 HYPKQ9NX55 129 aa7.3□□□□□ -1.24
TMEM39A-212ENST00000497993 ADAMTS1Q9UHI8 967 aa7.3□□□□□ -1.24
TMEM39A-212ENST00000497993 NIP7Q9Y221 180 aaKnown RBP eCLIP7.3□□□□□ -1.24
TMEM39A-212ENST00000497993 MSRB2Q9Y3D2 182 aa7.3□□□□□ -1.24
TMEM39A-212ENST00000497993 SCN9AQ15858 1988 aa7.29□□□□□ -1.24
TMEM39A-212ENST00000497993 H0YIN7 160 aa7.29□□□□□ -1.24
TMEM39A-212ENST00000497993 LILRB5O75023 590 aa7.29□□□□□ -1.24
TMEM39A-212ENST00000497993 RGS9O75916 674 aaPredicted RBP7.29□□□□□ -1.24
TMEM39A-212ENST00000497993 ALBP02768 609 aa7.29□□□□□ -1.24
TMEM39A-212ENST00000497993 CYP2E1P05181 493 aaPredicted RBP7.29□□□□□ -1.24
TMEM39A-212ENST00000497993 NPR1P16066 1061 aa7.29□□□□□ -1.24
TMEM39A-212ENST00000497993 EIF2AK2P19525 551 aaKnown RBP7.29□□□□□ -1.24
TMEM39A-212ENST00000497993 CHRNA5P30532 468 aa7.29□□□□□ -1.24
TMEM39A-212ENST00000497993 HDAC1Q13547 482 aaPredicted RBP7.29□□□□□ -1.24
TMEM39A-212ENST00000497993 UBE4AQ14139 1066 aa7.29□□□□□ -1.24
TMEM39A-212ENST00000497993 PERM1Q5SV97 790 aa7.29□□□□□ -1.24
TMEM39A-212ENST00000497993 LINC00114Q6XXX2 140 aa7.29□□□□□ -1.24
TMEM39A-212ENST00000497993 HFE2Q6ZVN8 426 aa7.29□□□□□ -1.24
TMEM39A-212ENST00000497993 KRT26Q7Z3Y9 468 aa7.29□□□□□ -1.24
TMEM39A-212ENST00000497993 NBPF5PQ86XG9 351 aaPredicted RBP7.29□□□□□ -1.24
TMEM39A-212ENST00000497993 SYNPOQ8N3V7 929 aa7.29□□□□□ -1.24
TMEM39A-212ENST00000497993 EPS8L3Q8TE67 593 aaKnown RBP7.29□□□□□ -1.24
TMEM39A-212ENST00000497993 MASTLQ96GX5 879 aa7.29□□□□□ -1.24
TMEM39A-212ENST00000497993 NSUN5Q96P11 429 aaKnown RBP7.29□□□□□ -1.24
TMEM39A-212ENST00000497993 LPIN3Q9BQK8 851 aa7.29□□□□□ -1.24
TMEM39A-212ENST00000497993 ISCA1Q9BUE6 129 aa7.29□□□□□ -1.24
TMEM39A-212ENST00000497993 CHRDQ9H2X0 955 aa7.29□□□□□ -1.24
TMEM39A-212ENST00000497993 ZFYVE28Q9HCC9 887 aa7.29□□□□□ -1.24
TMEM39A-212ENST00000497993 SALL4Q9UJQ4 1053 aa7.29□□□□□ -1.24
TMEM39A-212ENST00000497993 NAGPAQ9UK23 515 aa7.29□□□□□ -1.24
TMEM39A-212ENST00000497993 TRPM7Q96QT4 1865 aa7.29□□□□□ -1.24
TMEM39A-212ENST00000497993 COL4A1P02462 1669 aa7.28□□□□□ -1.24
TMEM39A-212ENST00000497993 FANCIQ9NVI1 1328 aa7.28□□□□□ -1.24
TMEM39A-212ENST00000497993 J3QW42 95 aa7.28□□□□□ -1.24
TMEM39A-212ENST00000497993 RNF225M0QZC1 329 aaPredicted RBP7.28□□□□□ -1.24
TMEM39A-212ENST00000497993 NFKBIEO00221 500 aa7.28□□□□□ -1.24
TMEM39A-212ENST00000497993 GNB5O14775 395 aa7.28□□□□□ -1.24
TMEM39A-212ENST00000497993 PPFIA4O75335 1185 aa7.28□□□□□ -1.24
TMEM39A-212ENST00000497993 EIF4A3P38919 411 aaKnown RBP7.28□□□□□ -1.24
TMEM39A-212ENST00000497993 SNRPNP63162 240 aaKnown RBP7.28□□□□□ -1.24
TMEM39A-212ENST00000497993 SETQ01105 290 aaPredicted RBP7.28□□□□□ -1.24
TMEM39A-212ENST00000497993 TCIRG1Q13488 830 aa7.28□□□□□ -1.24
TMEM39A-212ENST00000497993 TCEA2Q15560 299 aa7.28□□□□□ -1.24
TMEM39A-212ENST00000497993 NCAPG2Q86XI2 1143 aa7.28□□□□□ -1.24
TMEM39A-212ENST00000497993 C2CD5Q86YS7 1000 aa7.28□□□□□ -1.24
TMEM39A-212ENST00000497993 TRMT2AQ8IZ69 625 aaKnown RBP7.28□□□□□ -1.24
TMEM39A-212ENST00000497993 NT5C1AQ9BXI3 368 aa7.28□□□□□ -1.24
TMEM39A-212ENST00000497993 KANSL2Q9H9L4 492 aa7.28□□□□□ -1.24
TMEM39A-212ENST00000497993 JPH1Q9HDC5 661 aaPredicted RBP7.28□□□□□ -1.24
TMEM39A-212ENST00000497993 FOXD3Q9UJU5 478 aaPredicted RBP7.28□□□□□ -1.24
TMEM39A-212ENST00000497993 ECM29Q5VYK3 1845 aa7.27□□□□□ -1.25
TMEM39A-212ENST00000497993 CAND2O75155 1236 aa7.27□□□□□ -1.25
TMEM39A-212ENST00000497993 RLBP1P12271 317 aa7.27□□□□□ -1.25
TMEM39A-212ENST00000497993 EDN3P14138 238 aa7.27□□□□□ -1.25
TMEM39A-212ENST00000497993 MYL6BP14649 208 aa7.27□□□□□ -1.25
TMEM39A-212ENST00000497993 GSTT1P30711 240 aa7.27□□□□□ -1.25
TMEM39A-212ENST00000497993 RASGRF1Q13972 1273 aa7.27□□□□□ -1.25
TMEM39A-212ENST00000497993 LONRF3Q496Y0 759 aa7.27□□□□□ -1.25
TMEM39A-212ENST00000497993 COL13A1Q5TAT6 717 aaPredicted RBP7.27□□□□□ -1.25
TMEM39A-212ENST00000497993 CCDC30Q5VVM6 783 aa7.27□□□□□ -1.25
TMEM39A-212ENST00000497993 SUSD4Q5VX71 490 aa7.27□□□□□ -1.25
TMEM39A-212ENST00000497993 PRPF40BQ6NWY9 871 aaKnown RBP7.27□□□□□ -1.25
TMEM39A-212ENST00000497993 PI16Q6UXB8 463 aa7.27□□□□□ -1.25
TMEM39A-212ENST00000497993 COPS6Q7L5N1 327 aa7.27□□□□□ -1.25
TMEM39A-212ENST00000497993 PPP1R42Q7Z4L9 355 aa7.27□□□□□ -1.25
TMEM39A-212ENST00000497993 NLRP10Q86W26 655 aa7.27□□□□□ -1.25
TMEM39A-212ENST00000497993 CACTIN-AS1Q8N1I8 211 aa7.27□□□□□ -1.25
TMEM39A-212ENST00000497993 TSPYL6Q8N831 410 aa7.27□□□□□ -1.25
TMEM39A-212ENST00000497993 CEP120Q8N960 986 aa7.27□□□□□ -1.25
TMEM39A-212ENST00000497993 C8orf58Q8NAV2 365 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms