RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 PICALMQ13492 652 aa22.78■■□□□ 1.24
ACTN4-208ENST00000497637 CAVIN1Q6NZI2 390 aaKnown RBP22.78■■□□□ 1.24
ACTN4-208ENST00000497637 GPRC5AQ8NFJ5 357 aa22.78■■□□□ 1.24
ACTN4-208ENST00000497637 LEO1Q8WVC0 666 aaPredicted RBP22.78■■□□□ 1.24
ACTN4-208ENST00000497637 TFIP11Q9UBB9 837 aaKnown RBP22.78■■□□□ 1.24
ACTN4-208ENST00000497637 ISY1Q9ULR0 285 aaKnown RBP22.78■■□□□ 1.24
ACTN4-208ENST00000497637 CDK5RAP2Q96SN8 1893 aa22.77■■□□□ 1.24
ACTN4-208ENST00000497637 PRPF3O43395 683 aaKnown RBP22.77■■□□□ 1.24
ACTN4-208ENST00000497637 RGS2P41220 211 aa22.77■■□□□ 1.24
ACTN4-208ENST00000497637 KRT40Q6A162 431 aa22.77■■□□□ 1.24
ACTN4-208ENST00000497637 BRAPQ7Z569 592 aa22.77■■□□□ 1.24
ACTN4-208ENST00000497637 AIFM3Q96NN9 605 aa22.77■■□□□ 1.24
ACTN4-208ENST00000497637 RNF26Q9BY78 433 aaPredicted RBP22.77■■□□□ 1.24
ACTN4-208ENST00000497637 KAT14Q9H8E8 782 aa22.77■■□□□ 1.24
ACTN4-208ENST00000497637 SWAP70Q9UH65 585 aa22.77■■□□□ 1.24
ACTN4-208ENST00000497637 PTPRFP10586 1907 aa22.76■■□□□ 1.23
ACTN4-208ENST00000497637 FSD2A1L4K1 749 aa22.76■■□□□ 1.23
ACTN4-208ENST00000497637 MSCO60682 206 aa22.76■■□□□ 1.23
ACTN4-208ENST00000497637 CCND3P30281 292 aaPredicted RBP22.76■■□□□ 1.23
ACTN4-208ENST00000497637 HMGCS2P54868 508 aa22.76■■□□□ 1.23
ACTN4-208ENST00000497637 IRX3P78415 501 aaPredicted RBP22.76■■□□□ 1.23
ACTN4-208ENST00000497637 TRIM29Q14134 588 aa22.76■■□□□ 1.23
ACTN4-208ENST00000497637 TMTC3Q6ZXV5 915 aa22.76■■□□□ 1.23
ACTN4-208ENST00000497637 SH3BP5LQ7L8J4 393 aa22.76■■□□□ 1.23
ACTN4-208ENST00000497637 CCAR1Q8IX12 1150 aaKnown RBP22.76■■□□□ 1.23
ACTN4-208ENST00000497637 SYAP1Q96A49 352 aaPredicted RBP22.76■■□□□ 1.23
ACTN4-208ENST00000497637 SPATA32Q96LK8 384 aa22.76■■□□□ 1.23
ACTN4-208ENST00000497637 RAPGEFL1Q9UHV5 662 aa22.76■■□□□ 1.23
ACTN4-208ENST00000497637 RCOR1Q9UKL0 485 aa22.76■■□□□ 1.23
ACTN4-208ENST00000497637 HOXD11P31277 338 aaPredicted RBP22.75■■□□□ 1.23
ACTN4-208ENST00000497637 NOVP48745 357 aa22.75■■□□□ 1.23
ACTN4-208ENST00000497637 ZNF445P59923 1031 aa22.75■■□□□ 1.23
ACTN4-208ENST00000497637 CTCFLQ8NI51 663 aaPredicted RBP22.75■■□□□ 1.23
ACTN4-208ENST00000497637 FOCADQ5VW36 1801 aa22.75■■□□□ 1.23
ACTN4-208ENST00000497637 DDTLA6NHG4 134 aaPredicted RBP22.74■■□□□ 1.23
ACTN4-208ENST00000497637 HLA-DOAP06340 250 aa22.74■■□□□ 1.23
ACTN4-208ENST00000497637 KIF5BP33176 963 aa22.74■■□□□ 1.23
ACTN4-208ENST00000497637 SH3D19Q5HYK7 790 aa22.74■■□□□ 1.23
ACTN4-208ENST00000497637 USP6NLQ92738 828 aa22.74■■□□□ 1.23
ACTN4-208ENST00000497637 APBA2Q99767 749 aa22.74■■□□□ 1.23
ACTN4-208ENST00000497637 EHD4Q9H223 541 aa22.74■■□□□ 1.23
ACTN4-208ENST00000497637 TMEM63CQ9P1W3 806 aa22.74■■□□□ 1.23
ACTN4-208ENST00000497637 TCHHQ07283 1943 aa22.74■■□□□ 1.23
ACTN4-208ENST00000497637 PLIN4Q96Q06 1357 aa22.74■■□□□ 1.23
ACTN4-208ENST00000497637 DNM1LO00429 736 aa22.73■■□□□ 1.23
ACTN4-208ENST00000497637 GUCY1A2P33402 732 aa22.73■■□□□ 1.23
ACTN4-208ENST00000497637 GNAQP50148 359 aa22.73■■□□□ 1.23
ACTN4-208ENST00000497637 ATN1P54259 1190 aaPredicted RBP22.73■■□□□ 1.23
ACTN4-208ENST00000497637 RTP1P59025 263 aa22.73■■□□□ 1.23
ACTN4-208ENST00000497637 AKAP17AQ02040 695 aaKnown RBP22.73■■□□□ 1.23
ACTN4-208ENST00000497637 GRM4Q14833 912 aa22.73■■□□□ 1.23
ACTN4-208ENST00000497637 ZSCAN23Q3MJ62 389 aa22.73■■□□□ 1.23
ACTN4-208ENST00000497637 C9orf50Q5SZB4 431 aa22.73■■□□□ 1.23
ACTN4-208ENST00000497637 CCDC84Q86UT8 332 aaPredicted RBP22.73■■□□□ 1.23
ACTN4-208ENST00000497637 ATXN2LQ8WWM7 1075 aaKnown RBP22.73■■□□□ 1.23
ACTN4-208ENST00000497637 LPAR1Q92633 364 aa22.73■■□□□ 1.23
ACTN4-208ENST00000497637 DHX36Q9H2U1 1008 aaKnown RBP22.73■■□□□ 1.23
ACTN4-208ENST00000497637 GJB4Q9NTQ9 266 aa22.73■■□□□ 1.23
ACTN4-208ENST00000497637 RTEL1Q9NZ71 1219 aa22.73■■□□□ 1.23
ACTN4-208ENST00000497637 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.73■■□□□ 1.23
ACTN4-208ENST00000497637 SERPINB13Q9UIV8 391 aa22.73■■□□□ 1.23
ACTN4-208ENST00000497637 MYH1P12882 1939 aa22.72■■□□□ 1.23
ACTN4-208ENST00000497637 GOLGA6L3A6NEY3 463 aa22.72■■□□□ 1.23
ACTN4-208ENST00000497637 PLEKHA8P1O95397 391 aa22.72■■□□□ 1.23
ACTN4-208ENST00000497637 HOXA7P31268 230 aaPredicted RBP22.72■■□□□ 1.23
ACTN4-208ENST00000497637 MFSD14CQ5VZR4 134 aa22.72■■□□□ 1.23
ACTN4-208ENST00000497637 PNMA1Q8ND90 353 aa22.72■■□□□ 1.23
ACTN4-208ENST00000497637 GTF3C2Q8WUA4 911 aaPredicted RBP22.72■■□□□ 1.23
ACTN4-208ENST00000497637 TMEM47Q9BQJ4 181 aa22.72■■□□□ 1.23
ACTN4-208ENST00000497637 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.72■■□□□ 1.23
ACTN4-208ENST00000497637 AS3MTQ9HBK9 375 aa22.72■■□□□ 1.23
ACTN4-208ENST00000497637 DOCK1Q14185 1865 aa22.71■■□□□ 1.23
ACTN4-208ENST00000497637 USP17L5A8MUK1 530 aa22.71■■□□□ 1.23
ACTN4-208ENST00000497637 KIF28PB7ZC32 967 aa22.71■■□□□ 1.23
ACTN4-208ENST00000497637 U2AF2P26368 475 aaKnown RBP eCLIP22.71■■□□□ 1.23
ACTN4-208ENST00000497637 MORN1Q5T089 497 aa22.71■■□□□ 1.23
ACTN4-208ENST00000497637 L1TD1Q5T7N2 865 aaKnown RBP22.71■■□□□ 1.23
ACTN4-208ENST00000497637 MYSM1Q5VVJ2 828 aa22.71■■□□□ 1.23
ACTN4-208ENST00000497637 CMTR1Q8N1G2 835 aaKnown RBP22.71■■□□□ 1.23
ACTN4-208ENST00000497637 SRBD1Q8N5C6 995 aaKnown RBP22.71■■□□□ 1.23
ACTN4-208ENST00000497637 USP28Q96RU2 1077 aa22.71■■□□□ 1.23
ACTN4-208ENST00000497637 BDP1A6H8Y1 2624 aa22.71■■□□□ 1.23
ACTN4-208ENST00000497637 IGKV6D-41A0A0C4DH26 115 aa22.7■■□□□ 1.22
ACTN4-208ENST00000497637 TOP1P11387 765 aaKnown RBP22.7■■□□□ 1.22
ACTN4-208ENST00000497637 SAFBQ15424 915 aaKnown RBP eCLIP22.7■■□□□ 1.22
ACTN4-208ENST00000497637 PKN1Q16512 942 aa22.7■■□□□ 1.22
ACTN4-208ENST00000497637 PLEKHH3Q7Z736 793 aa22.7■■□□□ 1.22
ACTN4-208ENST00000497637 CCDC82Q8N4S0 544 aa22.7■■□□□ 1.22
ACTN4-208ENST00000497637 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.7■■□□□ 1.22
ACTN4-208ENST00000497637 TMOD4Q9NZQ9 345 aa22.7■■□□□ 1.22
ACTN4-208ENST00000497637 DDX20Q9UHI6 824 aaKnown RBP22.7■■□□□ 1.22
ACTN4-208ENST00000497637 ARIH1Q9Y4X5 557 aaPredicted RBP22.7■■□□□ 1.22
ACTN4-208ENST00000497637 V9GY48 417 aaPredicted RBP22.7■■□□□ 1.22
ACTN4-208ENST00000497637 PHIPQ8WWQ0 1821 aa22.7■■□□□ 1.22
ACTN4-208ENST00000497637 CNTNAP5Q8WYK1 1306 aa22.69■■□□□ 1.22
ACTN4-208ENST00000497637 MMP1P03956 469 aa22.69■■□□□ 1.22
ACTN4-208ENST00000497637 SHMT1P34896 483 aa22.69■■□□□ 1.22
ACTN4-208ENST00000497637 HERVK_113P62684 666 aa22.69■■□□□ 1.22
ACTN4-208ENST00000497637 CCL14Q16627 93 aa22.69■■□□□ 1.22
ACTN4-208ENST00000497637 GPR142Q7Z601 462 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms