RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 KCNQ5Q9NR82 932 aa13.05□□□□□ -0.32
SNRNP200-208ENST00000497539 ADAMTS3O15072 1205 aa13.04□□□□□ -0.32
SNRNP200-208ENST00000497539 ATP1A3P13637 1013 aa13.04□□□□□ -0.32
SNRNP200-208ENST00000497539 SFPQP23246 707 aaKnown RBP eCLIP13.04□□□□□ -0.32
SNRNP200-208ENST00000497539 GNA11P29992 359 aa13.04□□□□□ -0.32
SNRNP200-208ENST00000497539 CLCN6P51797 869 aa13.04□□□□□ -0.32
SNRNP200-208ENST00000497539 TPM4P67936 248 aa13.04□□□□□ -0.32
SNRNP200-208ENST00000497539 ZNF543Q08ER8 600 aa13.04□□□□□ -0.32
SNRNP200-208ENST00000497539 NFIAQ12857 509 aa13.04□□□□□ -0.32
SNRNP200-208ENST00000497539 E2F4Q16254 413 aa13.04□□□□□ -0.32
SNRNP200-208ENST00000497539 C11orf91Q3C1V1 193 aa13.04□□□□□ -0.32
SNRNP200-208ENST00000497539 ARHGAP29Q52LW3 1261 aa13.04□□□□□ -0.32
SNRNP200-208ENST00000497539 TMX1Q9H3N1 280 aa13.04□□□□□ -0.32
SNRNP200-208ENST00000497539 DNAJC18Q9H819 358 aa13.04□□□□□ -0.32
SNRNP200-208ENST00000497539 C6orf50Q9HD87 102 aa13.04□□□□□ -0.32
SNRNP200-208ENST00000497539 NYAP2Q9P242 653 aa13.04□□□□□ -0.32
SNRNP200-208ENST00000497539 PI4KBQ9UBF8 816 aa13.04□□□□□ -0.32
SNRNP200-208ENST00000497539 SERTAD1Q9UHV2 236 aa13.04□□□□□ -0.32
SNRNP200-208ENST00000497539 DNAI1Q9UI46 699 aa13.04□□□□□ -0.32
SNRNP200-208ENST00000497539 USP17L5A8MUK1 530 aa13.04□□□□□ -0.32
SNRNP200-208ENST00000497539 KIF3CO14782 793 aa13.04□□□□□ -0.32
SNRNP200-208ENST00000497539 POLR2DO15514 142 aaKnown RBP13.04□□□□□ -0.32
SNRNP200-208ENST00000497539 GSDMDP57764 484 aa13.04□□□□□ -0.32
SNRNP200-208ENST00000497539 MTA1Q13330 715 aa13.04□□□□□ -0.32
SNRNP200-208ENST00000497539 DHX8Q14562 1220 aaKnown RBP13.04□□□□□ -0.32
SNRNP200-208ENST00000497539 ZNF174Q15697 407 aa13.04□□□□□ -0.32
SNRNP200-208ENST00000497539 AOC3Q16853 763 aa13.04□□□□□ -0.32
SNRNP200-208ENST00000497539 GPATCH4Q5T3I0 446 aaKnown RBP13.04□□□□□ -0.32
SNRNP200-208ENST00000497539 MLKLQ8NB16 471 aa13.04□□□□□ -0.32
SNRNP200-208ENST00000497539 SYMPKQ92797 1274 aaKnown RBP13.04□□□□□ -0.32
SNRNP200-208ENST00000497539 CALR3Q96L12 384 aaKnown RBP13.04□□□□□ -0.32
SNRNP200-208ENST00000497539 FAM53CQ9NYF3 392 aa13.04□□□□□ -0.32
SNRNP200-208ENST00000497539 SUFUQ9UMX1 484 aa13.04□□□□□ -0.32
SNRNP200-208ENST00000497539 PCDHA5Q9Y5H7 936 aa13.04□□□□□ -0.32
SNRNP200-208ENST00000497539 COL4A5P29400 1685 aa13.04□□□□□ -0.32
SNRNP200-208ENST00000497539 FER1L6Q2WGJ9 1857 aa13.03□□□□□ -0.32
SNRNP200-208ENST00000497539 YDJCA8MPS7 323 aa13.03□□□□□ -0.32
SNRNP200-208ENST00000497539 RAD51AP2Q09MP3 1159 aa13.03□□□□□ -0.32
SNRNP200-208ENST00000497539 ZC3H12AQ5D1E8 599 aaKnown RBP13.03□□□□□ -0.32
SNRNP200-208ENST00000497539 SOGA3Q5TF21 947 aa13.03□□□□□ -0.32
SNRNP200-208ENST00000497539 USP17L2Q6R6M4 530 aa13.03□□□□□ -0.32
SNRNP200-208ENST00000497539 HEATR3Q7Z4Q2 680 aa13.03□□□□□ -0.32
SNRNP200-208ENST00000497539 ANKRD23Q86SG2 305 aa13.03□□□□□ -0.32
SNRNP200-208ENST00000497539 TTLL6Q8N841 843 aa13.03□□□□□ -0.32
SNRNP200-208ENST00000497539 ZNF513Q8N8E2 541 aaPredicted RBP13.03□□□□□ -0.32
SNRNP200-208ENST00000497539 GMLQ99445 158 aa13.03□□□□□ -0.32
SNRNP200-208ENST00000497539 SEC63Q9UGP8 760 aaKnown RBP13.03□□□□□ -0.32
SNRNP200-208ENST00000497539 DACH1Q9UI36 760 aa13.03□□□□□ -0.32
SNRNP200-208ENST00000497539 MAN1B1Q9UKM7 699 aa13.03□□□□□ -0.32
SNRNP200-208ENST00000497539 CCDC194A0A1B0GVG4 234 aa13.03□□□□□ -0.32
SNRNP200-208ENST00000497539 POLR3GO15318 223 aaPredicted RBP13.03□□□□□ -0.32
SNRNP200-208ENST00000497539 KCNA3P22001 575 aa13.03□□□□□ -0.32
SNRNP200-208ENST00000497539 CALRP27797 417 aaKnown RBP13.03□□□□□ -0.32
SNRNP200-208ENST00000497539 IL17AQ16552 155 aa13.03□□□□□ -0.32
SNRNP200-208ENST00000497539 HSP90AA4PQ58FG1 418 aa13.03□□□□□ -0.32
SNRNP200-208ENST00000497539 DNAJC21Q5F1R6 531 aaKnown RBP13.03□□□□□ -0.32
SNRNP200-208ENST00000497539 SH3BP5LQ7L8J4 393 aa13.03□□□□□ -0.32
SNRNP200-208ENST00000497539 DCAF4Q8WV16 495 aa13.03□□□□□ -0.32
SNRNP200-208ENST00000497539 FAM210AQ96ND0 272 aa13.03□□□□□ -0.32
SNRNP200-208ENST00000497539 HSD3B7Q9H2F3 369 aa13.03□□□□□ -0.32
SNRNP200-208ENST00000497539 CXorf56Q9H5V9 222 aa13.03□□□□□ -0.32
SNRNP200-208ENST00000497539 A0A087X0B3 334 aa13.02□□□□□ -0.32
SNRNP200-208ENST00000497539 MYL5Q02045 173 aa13.02□□□□□ -0.32
SNRNP200-208ENST00000497539 KIAA0825Q8IV33 1275 aa13.02□□□□□ -0.32
SNRNP200-208ENST00000497539 MTMR14Q8NCE2 650 aa13.02□□□□□ -0.32
SNRNP200-208ENST00000497539 IMPACTQ9P2X3 320 aa13.02□□□□□ -0.32
SNRNP200-208ENST00000497539 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.02□□□□□ -0.322e-7■□□□□ 9.3
SNRNP200-208ENST00000497539 FHOD1Q9Y613 1164 aa13.02□□□□□ -0.32
SNRNP200-208ENST00000497539 SEC31AO94979 1220 aaKnown RBP13.02□□□□□ -0.33
SNRNP200-208ENST00000497539 VIL1P09327 827 aaKnown RBP13.02□□□□□ -0.33
SNRNP200-208ENST00000497539 GOLGA8HP0CJ92 632 aa13.02□□□□□ -0.33
SNRNP200-208ENST00000497539 H2AFXP16104 143 aaPredicted RBP13.02□□□□□ -0.33
SNRNP200-208ENST00000497539 USP49Q70CQ1 688 aa13.02□□□□□ -0.33
SNRNP200-208ENST00000497539 DPF2Q92785 391 aa13.02□□□□□ -0.33
SNRNP200-208ENST00000497539 SMARCE1Q969G3 411 aa13.02□□□□□ -0.33
SNRNP200-208ENST00000497539 BMP6P22004 513 aa13.01□□□□□ -0.33
SNRNP200-208ENST00000497539 NAPAP54920 295 aa13.01□□□□□ -0.33
SNRNP200-208ENST00000497539 DPYDQ12882 1025 aa13.01□□□□□ -0.33
SNRNP200-208ENST00000497539 BMS1Q14692 1282 aaKnown RBP13.01□□□□□ -0.33
SNRNP200-208ENST00000497539 SPECC1Q5M775 1068 aa13.01□□□□□ -0.33
SNRNP200-208ENST00000497539 FKBP1CQ5VVH2 108 aa13.01□□□□□ -0.33
SNRNP200-208ENST00000497539 PDXDC2PQ6P474 469 aa13.01□□□□□ -0.33
SNRNP200-208ENST00000497539 RSBN1LQ6PCB5 846 aaPredicted RBP13.01□□□□□ -0.33
SNRNP200-208ENST00000497539 ZFPM1Q8IX07 1006 aa13.01□□□□□ -0.33
SNRNP200-208ENST00000497539 GMCL1P1Q8NEA9 526 aa13.01□□□□□ -0.33
SNRNP200-208ENST00000497539 PAGE5Q96GU1 130 aa13.01□□□□□ -0.33
SNRNP200-208ENST00000497539 GSDMAQ96QA5 445 aa13.01□□□□□ -0.33
SNRNP200-208ENST00000497539 PIGSQ96S52 555 aa13.01□□□□□ -0.33
SNRNP200-208ENST00000497539 KANSL2Q9H9L4 492 aa13.01□□□□□ -0.33
SNRNP200-208ENST00000497539 L2HGDHQ9H9P8 463 aa13.01□□□□□ -0.33
SNRNP200-208ENST00000497539 PNMA6FA0A0J9YX94 578 aa13.01□□□□□ -0.33
SNRNP200-208ENST00000497539 FANCGO15287 622 aa13.01□□□□□ -0.33
SNRNP200-208ENST00000497539 PPIP5K2O43314 1243 aa13.01□□□□□ -0.33
SNRNP200-208ENST00000497539 URI1O94763 535 aaPredicted RBP13.01□□□□□ -0.33
SNRNP200-208ENST00000497539 ERCC5P28715 1186 aaPredicted RBP13.01□□□□□ -0.33
SNRNP200-208ENST00000497539 NONOQ15233 471 aaKnown RBP eCLIP13.01□□□□□ -0.33
SNRNP200-208ENST00000497539 EPSTI1Q96J88 318 aa13.01□□□□□ -0.33
SNRNP200-208ENST00000497539 AK8Q96MA6 479 aa13.01□□□□□ -0.33
SNRNP200-208ENST00000497539 CCSER1Q9C0I3 900 aa13.01□□□□□ -0.33
SNRNP200-208ENST00000497539 SMCO2A6NFE2 343 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms