RNA–Protein interactions for RNA: ENST00000497469.5

RNF220-218, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-218ENST00000497469 TBX10O75333 385 aa17.4■□□□□ 0.38
RNF220-218ENST00000497469 NBPF20Q3BBV1 942 aa17.4■□□□□ 0.38
RNF220-218ENST00000497469 MCTP2Q6DN12 878 aa17.4■□□□□ 0.38
RNF220-218ENST00000497469 ARMCX2Q7L311 632 aa17.4■□□□□ 0.38
RNF220-218ENST00000497469 CLEC10AQ8IUN9 316 aa17.4■□□□□ 0.38
RNF220-218ENST00000497469 RETREG2Q8NC44 543 aa17.4■□□□□ 0.38
RNF220-218ENST00000497469 FGD4Q96M96 766 aa17.4■□□□□ 0.38
RNF220-218ENST00000497469 LRP2BPQ9P2M1 347 aa17.4■□□□□ 0.38
RNF220-218ENST00000497469 ZBTB22O15209 634 aa17.39■□□□□ 0.37
RNF220-218ENST00000497469 DYNC1LI2O43237 492 aaPredicted RBP17.39■□□□□ 0.37
RNF220-218ENST00000497469 CSPG5O95196 566 aa17.39■□□□□ 0.37
RNF220-218ENST00000497469 SUPT20HL2P0C7V6 817 aa17.39■□□□□ 0.37
RNF220-218ENST00000497469 PLCG2P16885 1265 aa17.39■□□□□ 0.37
RNF220-218ENST00000497469 SHMT1P34896 483 aa17.39■□□□□ 0.37
RNF220-218ENST00000497469 GTF2F1P35269 517 aaKnown RBP eCLIP17.39■□□□□ 0.37
RNF220-218ENST00000497469 SLC4A3P48751 1232 aa17.39■□□□□ 0.37
RNF220-218ENST00000497469 DYNLL1P63167 89 aaKnown RBP17.39■□□□□ 0.37
RNF220-218ENST00000497469 GPM6BQ13491 265 aa17.39■□□□□ 0.37
RNF220-218ENST00000497469 TMEM105Q8N8V8 129 aa17.39■□□□□ 0.37
RNF220-218ENST00000497469 SPATA5Q8NB90 893 aa17.39■□□□□ 0.37
RNF220-218ENST00000497469 XAGE2Q96GT9 111 aa17.39■□□□□ 0.37
RNF220-218ENST00000497469 KATNBL1Q9H079 304 aa17.39■□□□□ 0.37
RNF220-218ENST00000497469 SERPINB13Q9UIV8 391 aa17.39■□□□□ 0.37
RNF220-218ENST00000497469 ZNF214Q9UL59 606 aaPredicted RBP17.39■□□□□ 0.37
RNF220-218ENST00000497469 DNAJC25-GNG10A0A024R161 153 aa17.38■□□□□ 0.37
RNF220-218ENST00000497469 LOC730098B7Z3J9 87 aa17.38■□□□□ 0.37
RNF220-218ENST00000497469 LINC01565O15544 149 aa17.38■□□□□ 0.37
RNF220-218ENST00000497469 EPC2Q52LR7 807 aa17.38■□□□□ 0.37
RNF220-218ENST00000497469 FAM47CQ5HY64 1035 aa17.38■□□□□ 0.37
RNF220-218ENST00000497469 TMEM63BQ5T3F8 832 aa17.38■□□□□ 0.37
RNF220-218ENST00000497469 NAA16Q6N069 864 aaPredicted RBP17.38■□□□□ 0.37
RNF220-218ENST00000497469 CCDC144CPQ8IYA2 1237 aa17.38■□□□□ 0.37
RNF220-218ENST00000497469 AP5M1Q9H0R1 490 aa17.38■□□□□ 0.37
RNF220-218ENST00000497469 CD207Q9UJ71 328 aa17.38■□□□□ 0.37
RNF220-218ENST00000497469 PA2G4Q9UQ80 394 aaKnown RBP17.38■□□□□ 0.37
RNF220-218ENST00000497469 GNEQ9Y223 722 aaKnown RBP17.38■□□□□ 0.37
RNF220-218ENST00000497469 EP300Q09472 2414 aaPredicted RBP17.38■□□□□ 0.37
RNF220-218ENST00000497469 ZEB2O60315 1214 aa17.37■□□□□ 0.37
RNF220-218ENST00000497469 CIAO1O76071 339 aa17.37■□□□□ 0.37
RNF220-218ENST00000497469 NUBP1P53384 320 aa17.37■□□□□ 0.37
RNF220-218ENST00000497469 HYAL1Q12794 435 aa17.37■□□□□ 0.37
RNF220-218ENST00000497469 CTC1Q2NKJ3 1217 aa17.37■□□□□ 0.37
RNF220-218ENST00000497469 SEZ6LQ9BYH1 1024 aa17.37■□□□□ 0.37
RNF220-218ENST00000497469 IGFLR1Q9H665 355 aa17.37■□□□□ 0.37
RNF220-218ENST00000497469 DDX49Q9Y6V7 483 aaKnown RBP17.37■□□□□ 0.37
RNF220-218ENST00000497469 FANCIQ9NVI1 1328 aa17.37■□□□□ 0.37
RNF220-218ENST00000497469 VWA5AO00534 786 aa17.36■□□□□ 0.37
RNF220-218ENST00000497469 RALBP1Q15311 655 aa17.36■□□□□ 0.37
RNF220-218ENST00000497469 KCNG4Q8TDN1 519 aa17.36■□□□□ 0.37
RNF220-218ENST00000497469 RIPK3Q9Y572 518 aa17.36■□□□□ 0.37
RNF220-218ENST00000497469 ANKRD11Q6UB99 2663 aaPredicted RBP17.36■□□□□ 0.37
RNF220-218ENST00000497469 MYH1P12882 1939 aa17.35■□□□□ 0.37
RNF220-218ENST00000497469 A0A1B0GUL7 405 aa17.35■□□□□ 0.37
RNF220-218ENST00000497469 PITPNM1O00562 1244 aa17.35■□□□□ 0.37
RNF220-218ENST00000497469 SMPD1P17405 629 aa17.35■□□□□ 0.37
RNF220-218ENST00000497469 PPP4CP60510 307 aa17.35■□□□□ 0.37
RNF220-218ENST00000497469 GPNMBQ14956 572 aa17.35■□□□□ 0.37
RNF220-218ENST00000497469 ZNF467Q7Z7K2 595 aaPredicted RBP17.35■□□□□ 0.37
RNF220-218ENST00000497469 REPS2Q8NFH8 660 aa17.35■□□□□ 0.37
RNF220-218ENST00000497469 RIPOR3Q96MK2 946 aa17.35■□□□□ 0.37
RNF220-218ENST00000497469 ADAMTS5Q9UNA0 930 aa17.35■□□□□ 0.37
RNF220-218ENST00000497469 ATG2AQ2TAZ0 1938 aa17.35■□□□□ 0.37
RNF220-218ENST00000497469 H3BNC9 293 aa17.34■□□□□ 0.37
RNF220-218ENST00000497469 SPTBN2O15020 2390 aa17.34■□□□□ 0.37
RNF220-218ENST00000497469 IL15P40933 162 aaPredicted RBP17.34■□□□□ 0.37
RNF220-218ENST00000497469 EVX2Q03828 476 aa17.34■□□□□ 0.37
RNF220-218ENST00000497469 EXOSC9Q06265 439 aaKnown RBP17.34■□□□□ 0.37
RNF220-218ENST00000497469 MYO7AQ13402 2215 aa17.34■□□□□ 0.37
RNF220-218ENST00000497469 MVPQ14764 893 aaKnown RBP17.34■□□□□ 0.37
RNF220-218ENST00000497469 SNRNP48Q6IEG0 339 aaKnown RBP17.34■□□□□ 0.37
RNF220-218ENST00000497469 RPGRIP1Q96KN7 1286 aa17.34■□□□□ 0.37
RNF220-218ENST00000497469 EHD4Q9H223 541 aa17.34■□□□□ 0.37
RNF220-218ENST00000497469 INCENPQ9NQS7 918 aa17.34■□□□□ 0.37
RNF220-218ENST00000497469 DLL3Q9NYJ7 618 aa17.34■□□□□ 0.37
RNF220-218ENST00000497469 COPB2P35606 906 aa17.33■□□□□ 0.36
RNF220-218ENST00000497469 USP5P45974 858 aa17.33■□□□□ 0.36
RNF220-218ENST00000497469 PLCD1P51178 756 aa17.33■□□□□ 0.36
RNF220-218ENST00000497469 CBX2Q14781 532 aaPredicted RBP17.33■□□□□ 0.36
RNF220-218ENST00000497469 CEP250Q9BV73 2442 aa17.33■□□□□ 0.36
RNF220-218ENST00000497469 E9PSI1 815 aa17.32■□□□□ 0.36
RNF220-218ENST00000497469 WDR46O15213 610 aaKnown RBP17.32■□□□□ 0.36
RNF220-218ENST00000497469 MCAMP43121 646 aa17.32■□□□□ 0.36
RNF220-218ENST00000497469 CNKSR3Q6P9H4 555 aa17.32■□□□□ 0.36
RNF220-218ENST00000497469 MAGEB6Q8N7X4 407 aa17.32■□□□□ 0.36
RNF220-218ENST00000497469 USP44Q9H0E7 712 aa17.32■□□□□ 0.36
RNF220-218ENST00000497469 VCPKMTQ9H867 229 aa17.32■□□□□ 0.36
RNF220-218ENST00000497469 PDGFCQ9NRA1 345 aa17.32■□□□□ 0.36
RNF220-218ENST00000497469 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.32■□□□□ 0.36
RNF220-218ENST00000497469 SETXQ7Z333 2677 aaKnown RBP17.32■□□□□ 0.36
RNF220-218ENST00000497469 FRYLO94915 3013 aa17.31■□□□□ 0.36
RNF220-218ENST00000497469 MYL3P08590 195 aa17.31■□□□□ 0.36
RNF220-218ENST00000497469 NDUFV1P49821 464 aa17.31■□□□□ 0.36
RNF220-218ENST00000497469 BFSP2Q13515 415 aa17.31■□□□□ 0.36
RNF220-218ENST00000497469 PTPN21Q16825 1174 aa17.31■□□□□ 0.36
RNF220-218ENST00000497469 RSPO4Q2I0M5 234 aaPredicted RBP17.31■□□□□ 0.36
RNF220-218ENST00000497469 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.31■□□□□ 0.36
RNF220-218ENST00000497469 CHAMP1Q96JM3 812 aa17.31■□□□□ 0.36
RNF220-218ENST00000497469 NEUROD6Q96NK8 337 aa17.31■□□□□ 0.36
RNF220-218ENST00000497469 HINFPQ9BQA5 517 aa17.31■□□□□ 0.36
RNF220-218ENST00000497469 SNRKQ9NRH2 765 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms